RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 LRRN2O75325 713 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 POLD1P28340 1107 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 GUCY1A2P33402 732 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 ASPRV1Q53RT3 343 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 ARMCX5Q6P1M9 558 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 SHC4Q6S5L8 630 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 TMTC3Q6ZXV5 915 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 ENAHQ8N8S7 591 aaPredicted RBP17.7■□□□□ 0.42
GABRB3-215ENST00000622697 KCNF1Q9H3M0 494 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 ABCB6Q9NP58 842 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 STK32BQ9NY57 414 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.7■□□□□ 0.42
GABRB3-215ENST00000622697 SRGAP2O75044 1071 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 ARHGAP25P42331 645 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 ZNF131P52739 623 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 AMNQ9BXJ7 453 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 CCNE1P24864 410 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 SLC44A5Q8NCS7 719 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 A0A0G2JLW4 131 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 HHATQ5VTY9 493 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 SETBP1Q9Y6X0 1596 aa17.69■□□□□ 0.42
GABRB3-215ENST00000622697 HEXIM1O94992 359 aaKnown RBP17.69■□□□□ 0.42
GABRB3-215ENST00000622697 PPP2R5DQ14738 602 aa17.69■□□□□ 0.42
GABRB3-215ENST00000622697 LRCH2Q5VUJ6 765 aa17.69■□□□□ 0.42
GABRB3-215ENST00000622697 MB21D1Q8N884 522 aa17.69■□□□□ 0.42
GABRB3-215ENST00000622697 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.69■□□□□ 0.42
GABRB3-215ENST00000622697 SERPINB2P05120 415 aa17.69■□□□□ 0.42
GABRB3-215ENST00000622697 PDE6BP35913 854 aa17.69■□□□□ 0.42
GABRB3-215ENST00000622697 CDK8P49336 464 aa17.69■□□□□ 0.42
GABRB3-215ENST00000622697 FKBP3Q00688 224 aaKnown RBP17.69■□□□□ 0.42
GABRB3-215ENST00000622697 CCDC160A6NGH7 325 aa17.69■□□□□ 0.42
GABRB3-215ENST00000622697 TEX33O43247 280 aa17.69■□□□□ 0.42
GABRB3-215ENST00000622697 PNMA6AP0CW24 399 aaPredicted RBP17.69■□□□□ 0.42
GABRB3-215ENST00000622697 MESDQ14696 234 aa17.69■□□□□ 0.42
GABRB3-215ENST00000622697 BRINP3Q76B58 766 aa17.69■□□□□ 0.42
GABRB3-215ENST00000622697 TEKT3Q9BXF9 490 aa17.69■□□□□ 0.42
GABRB3-215ENST00000622697 PCIF1Q9H4Z3 704 aa17.69■□□□□ 0.42
GABRB3-215ENST00000622697 METTL14Q9HCE5 456 aaKnown RBP17.69■□□□□ 0.42
GABRB3-215ENST00000622697 BSDC1Q9NW68 430 aaPredicted RBP17.69■□□□□ 0.42
GABRB3-215ENST00000622697 SERPINB13Q9UIV8 391 aa17.69■□□□□ 0.42
GABRB3-215ENST00000622697 MYO3AQ8NEV4 1616 aa17.69■□□□□ 0.42
GABRB3-215ENST00000622697 PPEF1O14829 653 aaPredicted RBP17.69■□□□□ 0.42
GABRB3-215ENST00000622697 DKC1O60832 514 aaKnown RBP eCLIP17.69■□□□□ 0.42
GABRB3-215ENST00000622697 ADCY8P40145 1251 aa17.69■□□□□ 0.42
GABRB3-215ENST00000622697 CFAP157Q5JU67 520 aa17.69■□□□□ 0.42
GABRB3-215ENST00000622697 PROCA1Q8NCQ7 364 aaPredicted RBP17.69■□□□□ 0.42
GABRB3-215ENST00000622697 AZI2Q9H6S1 392 aa17.69■□□□□ 0.42
GABRB3-215ENST00000622697 MRPL11Q9Y3B7 192 aaKnown RBP17.69■□□□□ 0.42
GABRB3-215ENST00000622697 ST7Q9NRC1 585 aa17.68■□□□□ 0.42
GABRB3-215ENST00000622697 BAIAP2L1Q9UHR4 511 aa17.68■□□□□ 0.42
GABRB3-215ENST00000622697 ZNF609O15014 1411 aa17.68■□□□□ 0.42
GABRB3-215ENST00000622697 BUB1BO60566 1050 aaPredicted RBP17.68■□□□□ 0.42
GABRB3-215ENST00000622697 GAS8O95995 478 aa17.68■□□□□ 0.42
GABRB3-215ENST00000622697 ZBED6P86452 979 aa17.68■□□□□ 0.42
GABRB3-215ENST00000622697 GOLGA5Q8TBA6 731 aa17.68■□□□□ 0.42
GABRB3-215ENST00000622697 PLCB1Q9NQ66 1216 aa17.68■□□□□ 0.42
GABRB3-215ENST00000622697 ATP11AP98196 1134 aa17.68■□□□□ 0.42
GABRB3-215ENST00000622697 GPATCH4Q5T3I0 446 aaKnown RBP17.68■□□□□ 0.42
GABRB3-215ENST00000622697 FYB2Q5VWT5 728 aa17.68■□□□□ 0.42
GABRB3-215ENST00000622697 LARSQ9P2J5 1176 aaKnown RBP17.68■□□□□ 0.42
GABRB3-215ENST00000622697 STK38LQ9Y2H1 464 aa17.68■□□□□ 0.42
GABRB3-215ENST00000622697 ARHGEF40Q8TER5 1519 aa17.68■□□□□ 0.42
GABRB3-215ENST00000622697 IQSEC2Q5JU85 1478 aa17.68■□□□□ 0.42
GABRB3-215ENST00000622697 NIM1KQ8IY84 436 aa17.68■□□□□ 0.42
GABRB3-215ENST00000622697 DEPTORQ8TB45 409 aa17.68■□□□□ 0.42
GABRB3-215ENST00000622697 RSRC1Q96IZ7 334 aaKnown RBP17.68■□□□□ 0.42
GABRB3-215ENST00000622697 NDST4Q9H3R1 872 aa17.68■□□□□ 0.42
GABRB3-215ENST00000622697 THAP9Q9H5L6 903 aa17.68■□□□□ 0.42
GABRB3-215ENST00000622697 POLD4Q9HCU8 107 aa17.68■□□□□ 0.42
GABRB3-215ENST00000622697 PCDHA13Q9Y5I0 950 aa17.68■□□□□ 0.42
GABRB3-215ENST00000622697 PP2D1A8MPX8 630 aa17.67■□□□□ 0.42
GABRB3-215ENST00000622697 CSRNP1Q96S65 589 aa17.67■□□□□ 0.42
GABRB3-215ENST00000622697 SPATA31A3Q5VYP0 1347 aa17.67■□□□□ 0.42
GABRB3-215ENST00000622697 GSG1L2A8MUP6 293 aa17.67■□□□□ 0.42
GABRB3-215ENST00000622697 GFPT2O94808 682 aa17.67■□□□□ 0.42
GABRB3-215ENST00000622697 ATF7P17544 494 aaPredicted RBP17.67■□□□□ 0.42
GABRB3-215ENST00000622697 DPF2Q92785 391 aa17.67■□□□□ 0.42
GABRB3-215ENST00000622697 STIM2Q9P246 746 aa17.67■□□□□ 0.42
GABRB3-215ENST00000622697 CCPG1Q9ULG6 757 aa17.67■□□□□ 0.42
GABRB3-215ENST00000622697 LIG4P49917 911 aa17.67■□□□□ 0.42
GABRB3-215ENST00000622697 EXOSC10Q01780 885 aaKnown RBP17.67■□□□□ 0.42
GABRB3-215ENST00000622697 RETREG2Q8NC44 543 aa17.67■□□□□ 0.42
GABRB3-215ENST00000622697 GLG1Q92896 1179 aa17.67■□□□□ 0.42
GABRB3-215ENST00000622697 CCDC151A5D8V7 595 aa17.67■□□□□ 0.42
GABRB3-215ENST00000622697 KIF11P52732 1056 aa17.67■□□□□ 0.42
GABRB3-215ENST00000622697 MYL7Q01449 175 aa17.67■□□□□ 0.42
GABRB3-215ENST00000622697 OTUD6AQ7L8S5 288 aa17.67■□□□□ 0.42
GABRB3-215ENST00000622697 CELF1Q92879 486 aaKnown RBP17.67■□□□□ 0.42
GABRB3-215ENST00000622697 EMILIN3Q9NT22 766 aa17.67■□□□□ 0.42
GABRB3-215ENST00000622697 AFPP02771 609 aaKnown RBP17.67■□□□□ 0.42
GABRB3-215ENST00000622697 STX2P32856 288 aa17.67■□□□□ 0.42
GABRB3-215ENST00000622697 PRCPP42785 496 aa17.67■□□□□ 0.42
GABRB3-215ENST00000622697 CLUL1Q15846 466 aa17.67■□□□□ 0.42
GABRB3-215ENST00000622697 KAZNQ674X7 775 aa17.67■□□□□ 0.42
GABRB3-215ENST00000622697 ZNF408Q9H9D4 720 aa17.67■□□□□ 0.42
GABRB3-215ENST00000622697 HOXA13P31271 388 aaPredicted RBP17.66■□□□□ 0.42
GABRB3-215ENST00000622697 MINPP1Q9UNW1 487 aa17.66■□□□□ 0.42
GABRB3-215ENST00000622697 PDE6CP51160 858 aa17.66■□□□□ 0.42
GABRB3-215ENST00000622697 CCDC89Q8N998 374 aa17.66■□□□□ 0.42
GABRB3-215ENST00000622697 ARHGEF2Q92974 986 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms