RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 RMDN3Q96TC7 470 aa20.85■□□□□ 0.93
SCAMP4-213ENST00000621748 MYL10Q9BUA6 226 aa20.85■□□□□ 0.93
SCAMP4-213ENST00000621748 GRIN2DO15399 1336 aa20.84■□□□□ 0.93
SCAMP4-213ENST00000621748 CDC45O75419 566 aa20.84■□□□□ 0.93
SCAMP4-213ENST00000621748 HSD17B4P51659 736 aa20.84■□□□□ 0.93
SCAMP4-213ENST00000621748 GHRHRQ02643 423 aa20.84■□□□□ 0.93
SCAMP4-213ENST00000621748 SCFD2Q8WU76 684 aa20.84■□□□□ 0.93
SCAMP4-213ENST00000621748 COPS5Q92905 334 aa20.84■□□□□ 0.93
SCAMP4-213ENST00000621748 TMEM87BQ96K49 555 aa20.84■□□□□ 0.93
SCAMP4-213ENST00000621748 MAP3K14Q99558 947 aa20.84■□□□□ 0.93
SCAMP4-213ENST00000621748 MROH7Q68CQ1 1323 aa20.83■□□□□ 0.93
SCAMP4-213ENST00000621748 KIAA1217Q5T5P2 1943 aa20.83■□□□□ 0.93
SCAMP4-213ENST00000621748 PNMA6FA0A0J9YX94 578 aa20.83■□□□□ 0.93
SCAMP4-213ENST00000621748 ZEB2O60315 1214 aa20.83■□□□□ 0.93
SCAMP4-213ENST00000621748 CABYRO75952 493 aa20.83■□□□□ 0.93
SCAMP4-213ENST00000621748 RAG1P15918 1043 aa20.83■□□□□ 0.93
SCAMP4-213ENST00000621748 PPP2R5BQ15173 497 aa20.83■□□□□ 0.93
SCAMP4-213ENST00000621748 FAM126BQ8IXS8 530 aa20.83■□□□□ 0.93
SCAMP4-213ENST00000621748 TMTC2Q8N394 836 aa20.83■□□□□ 0.93
SCAMP4-213ENST00000621748 SLC43A3Q8NBI5 491 aa20.83■□□□□ 0.93
SCAMP4-213ENST00000621748 OR6J1Q8NGC5 347 aa20.83■□□□□ 0.93
SCAMP4-213ENST00000621748 IWS1Q96ST2 819 aa20.83■□□□□ 0.93
SCAMP4-213ENST00000621748 LRRC2Q9BYS8 371 aa20.83■□□□□ 0.93
SCAMP4-213ENST00000621748 TBX21Q9UL17 535 aa20.83■□□□□ 0.93
SCAMP4-213ENST00000621748 DDAH1O94760 285 aa20.82■□□□□ 0.92
SCAMP4-213ENST00000621748 ARIH2O95376 493 aa20.82■□□□□ 0.92
SCAMP4-213ENST00000621748 TXNP10599 105 aaKnown RBP20.82■□□□□ 0.92
SCAMP4-213ENST00000621748 EIF2AK2P19525 551 aaKnown RBP20.82■□□□□ 0.92
SCAMP4-213ENST00000621748 ITGA7Q13683 1181 aa20.82■□□□□ 0.92
SCAMP4-213ENST00000621748 SHHQ15465 462 aa20.82■□□□□ 0.92
SCAMP4-213ENST00000621748 C9orf50Q5SZB4 431 aa20.82■□□□□ 0.92
SCAMP4-213ENST00000621748 ARHGEF16Q5VV41 709 aa20.82■□□□□ 0.92
SCAMP4-213ENST00000621748 CCDC62Q6P9F0 684 aa20.82■□□□□ 0.92
SCAMP4-213ENST00000621748 NFXL1Q6ZNB6 911 aa20.82■□□□□ 0.92
SCAMP4-213ENST00000621748 CTCFLQ8NI51 663 aaPredicted RBP20.82■□□□□ 0.92
SCAMP4-213ENST00000621748 PIBF1Q8WXW3 757 aa20.82■□□□□ 0.92
SCAMP4-213ENST00000621748 PXMP2Q9NR77 195 aa20.82■□□□□ 0.92
SCAMP4-213ENST00000621748 CCDC69A6NI79 296 aa20.81■□□□□ 0.92
SCAMP4-213ENST00000621748 NKRFO15226 690 aaKnown RBP eCLIP20.81■□□□□ 0.92
SCAMP4-213ENST00000621748 RXRAP19793 462 aa20.81■□□□□ 0.92
SCAMP4-213ENST00000621748 HOXA13P31271 388 aaPredicted RBP20.81■□□□□ 0.92
SCAMP4-213ENST00000621748 LIFRP42702 1097 aa20.81■□□□□ 0.92
SCAMP4-213ENST00000621748 EPHB4P54760 987 aa20.81■□□□□ 0.92
SCAMP4-213ENST00000621748 PSMC6P62333 389 aa20.81■□□□□ 0.92
SCAMP4-213ENST00000621748 TTLL4Q14679 1199 aa20.81■□□□□ 0.92
SCAMP4-213ENST00000621748 STXBP2Q15833 593 aa20.81■□□□□ 0.92
SCAMP4-213ENST00000621748 RNF20Q5VTR2 975 aa20.81■□□□□ 0.92
SCAMP4-213ENST00000621748 SEPT14Q6ZU15 432 aa20.81■□□□□ 0.92
SCAMP4-213ENST00000621748 RASEFQ8IZ41 740 aa20.81■□□□□ 0.92
SCAMP4-213ENST00000621748 MAP3K20Q9NYL2 800 aaKnown RBP20.81■□□□□ 0.92
SCAMP4-213ENST00000621748 TIMP1P01033 207 aa20.8■□□□□ 0.92
SCAMP4-213ENST00000621748 CD4P01730 458 aa20.8■□□□□ 0.92
SCAMP4-213ENST00000621748 NR3C2P08235 984 aa20.8■□□□□ 0.92
SCAMP4-213ENST00000621748 KIF5BP33176 963 aa20.8■□□□□ 0.92
SCAMP4-213ENST00000621748 CPT1AP50416 773 aa20.8■□□□□ 0.92
SCAMP4-213ENST00000621748 TRAF1Q13077 416 aa20.8■□□□□ 0.92
SCAMP4-213ENST00000621748 SPZ1Q9BXG8 430 aa20.8■□□□□ 0.92
SCAMP4-213ENST00000621748 EIF3JO75822 258 aaKnown RBP20.79■□□□□ 0.92
SCAMP4-213ENST00000621748 PLEKHA8P1O95397 391 aa20.79■□□□□ 0.92
SCAMP4-213ENST00000621748 PURAQ00577 322 aaKnown RBP20.79■□□□□ 0.92
SCAMP4-213ENST00000621748 LY6KQ17RY6 165 aa20.79■□□□□ 0.92
SCAMP4-213ENST00000621748 TSGA10IPQ3SY00 556 aa20.79■□□□□ 0.92
SCAMP4-213ENST00000621748 RAB11FIP4Q86YS3 637 aa20.79■□□□□ 0.92
SCAMP4-213ENST00000621748 CMTR1Q8N1G2 835 aaKnown RBP20.79■□□□□ 0.92
SCAMP4-213ENST00000621748 SRBD1Q8N5C6 995 aaKnown RBP20.79■□□□□ 0.92
SCAMP4-213ENST00000621748 SAMD3Q8N6K7 520 aa20.79■□□□□ 0.92
SCAMP4-213ENST00000621748 NEK1Q96PY6 1258 aa20.79■□□□□ 0.92
SCAMP4-213ENST00000621748 POLR3EQ9NVU0 708 aa20.79■□□□□ 0.92
SCAMP4-213ENST00000621748 A6NJR5 290 aa20.78■□□□□ 0.92
SCAMP4-213ENST00000621748 GCOM1H8Y6P7 765 aaPredicted RBP20.78■□□□□ 0.92
SCAMP4-213ENST00000621748 TLR3O15455 904 aaKnown RBP20.78■□□□□ 0.92
SCAMP4-213ENST00000621748 MYL3P08590 195 aa20.78■□□□□ 0.92
SCAMP4-213ENST00000621748 POLR2MP0CAP2 368 aa20.78■□□□□ 0.92
SCAMP4-213ENST00000621748 SMARCA1P28370 1054 aa20.78■□□□□ 0.92
SCAMP4-213ENST00000621748 EXOSC10Q01780 885 aaKnown RBP20.78■□□□□ 0.92
SCAMP4-213ENST00000621748 ADCK5Q3MIX3 580 aa20.78■□□□□ 0.92
SCAMP4-213ENST00000621748 LZTS2Q9BRK4 669 aa20.78■□□□□ 0.92
SCAMP4-213ENST00000621748 PDCD2LQ9BRP1 358 aa20.78■□□□□ 0.92
SCAMP4-213ENST00000621748 MYH7BA7E2Y1 1941 aa20.78■□□□□ 0.92
SCAMP4-213ENST00000621748 SCN10AQ9Y5Y9 1956 aa20.77■□□□□ 0.92
SCAMP4-213ENST00000621748 CALM1P0DP23 149 aa20.77■□□□□ 0.92
SCAMP4-213ENST00000621748 CALM2P0DP24 149 aa20.77■□□□□ 0.92
SCAMP4-213ENST00000621748 CALM3P0DP25 149 aa20.77■□□□□ 0.92
SCAMP4-213ENST00000621748 MYCLP12524 364 aaPredicted RBP20.77■□□□□ 0.92
SCAMP4-213ENST00000621748 GNAQP50148 359 aa20.77■□□□□ 0.92
SCAMP4-213ENST00000621748 FPGSQ05932 587 aa20.77■□□□□ 0.92
SCAMP4-213ENST00000621748 GPR153Q6NV75 609 aa20.77■□□□□ 0.92
SCAMP4-213ENST00000621748 SGMS1Q86VZ5 419 aa20.77■□□□□ 0.92
SCAMP4-213ENST00000621748 FCHSD1Q86WN1 690 aa20.77■□□□□ 0.92
SCAMP4-213ENST00000621748 IL31RAQ8NI17 732 aa20.77■□□□□ 0.92
SCAMP4-213ENST00000621748 RRP36Q96EU6 259 aaKnown RBP20.77■□□□□ 0.92
SCAMP4-213ENST00000621748 TCEANC2Q96MN5 208 aa20.77■□□□□ 0.92
SCAMP4-213ENST00000621748 MTG1Q9BT17 334 aaPredicted RBP20.77■□□□□ 0.92
SCAMP4-213ENST00000621748 TRPV6Q9H1D0 765 aa20.77■□□□□ 0.92
SCAMP4-213ENST00000621748 SLC12A7Q9Y666 1083 aa20.77■□□□□ 0.92
SCAMP4-213ENST00000621748 B4GALT4O60513 344 aa20.76■□□□□ 0.91
SCAMP4-213ENST00000621748 RGS20O76081 388 aa20.76■□□□□ 0.91
SCAMP4-213ENST00000621748 ARHGAP1Q07960 439 aa20.76■□□□□ 0.91
SCAMP4-213ENST00000621748 PGM5Q15124 567 aa20.76■□□□□ 0.91
SCAMP4-213ENST00000621748 BRDTQ58F21 947 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms