RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 YTHDC2Q9H6S0 1430 aaKnown RBP7.78□□□□□ -1.16
COLCA1-205ENST00000620864 NSFP46459 744 aaKnown RBP7.78□□□□□ -1.16
COLCA1-205ENST00000620864 AP2B1P63010 937 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 IRX5P78411 483 aaPredicted RBP7.78□□□□□ -1.16
COLCA1-205ENST00000620864 GLE1Q53GS7 698 aaKnown RBP7.78□□□□□ -1.16
COLCA1-205ENST00000620864 EMBQ6PCB8 327 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 NOP9Q86U38 636 aaKnown RBP7.78□□□□□ -1.16
COLCA1-205ENST00000620864 TEX11Q8IYF3 940 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 ACRBPQ8NEB7 543 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 HDAC11Q96DB2 347 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 PBKQ96KB5 322 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 FGD4Q96M96 766 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 TTC1Q99614 292 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 ANO3Q9BYT9 981 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 METTL14Q9HCE5 456 aaKnown RBP7.78□□□□□ -1.16
COLCA1-205ENST00000620864 TBC1D23Q9NUY8 699 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 PAG1Q9NWQ8 432 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 ESYT2A0FGR8 921 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 GTPBP10A4D1E9 387 aaKnown RBP7.78□□□□□ -1.16
COLCA1-205ENST00000620864 SYCE1LA8MT33 242 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 ATP1A2P50993 1020 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 HAND2P61296 217 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 SLFNL1Q499Z3 407 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 KRT25Q7Z3Z0 450 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 SUGP1Q8IWZ8 645 aaKnown RBP7.78□□□□□ -1.16
COLCA1-205ENST00000620864 SCYL1Q96KG9 808 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 SPATA17Q96L03 361 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 KRT82Q9NSB4 513 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 SLC5A4Q9NY91 659 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 KCNH4Q9UQ05 1017 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 CD2APQ9Y5K6 639 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 SOS2Q07890 1332 aaPredicted RBP7.78□□□□□ -1.16
COLCA1-205ENST00000620864 IBTKQ9P2D0 1353 aaPredicted RBP7.78□□□□□ -1.16
COLCA1-205ENST00000620864 ZNF189O75820 626 aaPredicted RBP7.77□□□□□ -1.16
COLCA1-205ENST00000620864 TRPC1P48995 793 aa7.77□□□□□ -1.16
COLCA1-205ENST00000620864 CNKSR1Q969H4 720 aa7.77□□□□□ -1.16
COLCA1-205ENST00000620864 ATP6V0A4Q9HBG4 840 aa7.77□□□□□ -1.16
COLCA1-205ENST00000620864 SSH2Q76I76 1423 aa7.77□□□□□ -1.16
COLCA1-205ENST00000620864 ATP7AQ04656 1500 aa7.77□□□□□ -1.16
COLCA1-205ENST00000620864 PSMD2Q13200 908 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 ERFEQ4G0M1 354 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 RNF169Q8NCN4 708 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 VWA3AA6NCI4 1184 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 GUCY2FP51841 1108 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 DEFA1P59665 94 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 DEFA3P59666 94 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 BPIFB4P59827 614 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 CAPRIN2Q6IMN6 1127 aaKnown RBP7.77□□□□□ -1.17
COLCA1-205ENST00000620864 HACE1Q8IYU2 909 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 FBXO18Q8NFZ0 1043 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 TRIM33Q9UPN9 1127 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 UGGT2Q9NYU1 1516 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 ZRANB2O95218 330 aaKnown RBP eCLIP7.77□□□□□ -1.17
COLCA1-205ENST00000620864 ATXN3P54252 364 aaPredicted RBP7.77□□□□□ -1.17
COLCA1-205ENST00000620864 KRT81Q14533 505 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 CEP55Q53EZ4 464 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 FAM133BQ5BKY9 247 aaKnown RBP7.77□□□□□ -1.17
COLCA1-205ENST00000620864 LRRC8AQ8IWT6 810 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 NELFBQ8WX92 580 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 MPP6Q9NZW5 540 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 MAGEB6P1A0A0J9YX57 407 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 H0Y626 953 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 KCNK3O14649 394 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 TRIM16O95361 564 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 PARP1P09874 1014 aaKnown RBP7.77□□□□□ -1.17
COLCA1-205ENST00000620864 RPS6KB1P23443 525 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 MDM2Q00987 491 aaPredicted RBP7.77□□□□□ -1.17
COLCA1-205ENST00000620864 DOK7Q18PE1 504 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 HORMAD1Q86X24 394 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 TRIM50Q86XT4 487 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 MRRFQ96E11 262 aaKnown RBP7.77□□□□□ -1.17
COLCA1-205ENST00000620864 OSBPL9Q96SU4 736 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 DIS3Q9Y2L1 958 aaKnown RBP7.77□□□□□ -1.17
COLCA1-205ENST00000620864 ESRRAP11474 423 aaPredicted RBP7.77□□□□□ -1.17
COLCA1-205ENST00000620864 LZICQ8WZA0 190 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 RPS6KC1Q96S38 1066 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 CAPN11Q9UMQ6 739 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 TMEM247A6NEH6 219 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 TADA3O75528 432 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 LDHBP07195 334 aaKnown RBP7.77□□□□□ -1.17
COLCA1-205ENST00000620864 MTX1Q13505 466 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 SLF1Q9BQI6 1058 aa7.77□□□□□ -1.17
COLCA1-205ENST00000620864 GOLGA8MH3BSY2 632 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 HGSO14964 777 aaPredicted RBP7.76□□□□□ -1.17
COLCA1-205ENST00000620864 NR1I2O75469 434 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 TRPA1O75762 1119 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 CHEK2O96017 543 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 XRCC5P13010 732 aaKnown RBP7.76□□□□□ -1.17
COLCA1-205ENST00000620864 OPTNQ96CV9 577 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 PAGR1Q9BTK6 254 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 CTNND1O60716 968 aaKnown RBP7.76□□□□□ -1.17
COLCA1-205ENST00000620864 STAM2O75886 525 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 ABL1P00519 1130 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 EEF1GP26641 437 aaKnown RBP7.76□□□□□ -1.17
COLCA1-205ENST00000620864 AP1B1Q10567 949 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 AOC3Q16853 763 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 TTLL7Q6ZT98 887 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 ZC3H18Q86VM9 953 aaKnown RBP7.76□□□□□ -1.17
COLCA1-205ENST00000620864 GJD4Q96KN9 370 aaPredicted RBP7.76□□□□□ -1.17
COLCA1-205ENST00000620864 CHCHD3Q9NX63 227 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms