RNA–Protein interactions for RNA: ENST00000619785.1

SENP3-210, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-210ENST00000619785 CUEDC1Q9NWM3 386 aaPredicted RBP9.03□□□□□ -0.96
SENP3-210ENST00000619785 ABI2Q9NYB9 513 aaPredicted RBP9.03□□□□□ -0.96
SENP3-210ENST00000619785 ZNFX1Q9P2E3 1918 aaKnown RBP9.03□□□□□ -0.96
SENP3-210ENST00000619785 MYO9BQ13459 2157 aa9.03□□□□□ -0.96
SENP3-210ENST00000619785 A0A1W2PNR3 127 aa9.02□□□□□ -0.97
SENP3-210ENST00000619785 NBPF7P0C2Y1 421 aaPredicted RBP9.02□□□□□ -0.97
SENP3-210ENST00000619785 MSX1P28360 303 aa9.02□□□□□ -0.97
SENP3-210ENST00000619785 PRDX5P30044 214 aa9.02□□□□□ -0.97
SENP3-210ENST00000619785 HOXA7P31268 230 aaPredicted RBP9.02□□□□□ -0.97
SENP3-210ENST00000619785 CHAF1AQ13111 956 aaPredicted RBP9.02□□□□□ -0.97
SENP3-210ENST00000619785 LRRC26Q2I0M4 334 aa9.02□□□□□ -0.97
SENP3-210ENST00000619785 TTC39BQ5VTQ0 682 aaPredicted RBP9.02□□□□□ -0.97
SENP3-210ENST00000619785 SMCR8Q8TEV9 937 aaPredicted RBP9.02□□□□□ -0.97
SENP3-210ENST00000619785 SOCS4Q8WXH5 440 aa9.02□□□□□ -0.97
SENP3-210ENST00000619785 OSBPL5Q9H0X9 879 aaPredicted RBP9.02□□□□□ -0.97
SENP3-210ENST00000619785 PICK1Q9NRD5 415 aa9.02□□□□□ -0.97
SENP3-210ENST00000619785 SMCHD1A6NHR9 2005 aa9.01□□□□□ -0.97
SENP3-210ENST00000619785 MAP4K4O95819 1239 aaPredicted RBP9.01□□□□□ -0.97
SENP3-210ENST00000619785 RHOQP17081 205 aa9.01□□□□□ -0.97
SENP3-210ENST00000619785 RFX5P48382 616 aaPredicted RBP9.01□□□□□ -0.97
SENP3-210ENST00000619785 RGS3P49796 1198 aa9.01□□□□□ -0.97
SENP3-210ENST00000619785 SMAD3P84022 425 aaKnown RBP9.01□□□□□ -0.97
SENP3-210ENST00000619785 TYRO3Q06418 890 aa9.01□□□□□ -0.97
SENP3-210ENST00000619785 TCP10Q12799 353 aa9.01□□□□□ -0.97
SENP3-210ENST00000619785 SNX17Q15036 470 aa9.01□□□□□ -0.97
SENP3-210ENST00000619785 GALNT12Q8IXK2 581 aa9.01□□□□□ -0.97
SENP3-210ENST00000619785 PGBD3Q8N328 593 aa9.01□□□□□ -0.97
SENP3-210ENST00000619785 LPIN2Q92539 896 aa9.01□□□□□ -0.97
SENP3-210ENST00000619785 CDX2Q99626 313 aaPredicted RBP9.01□□□□□ -0.97
SENP3-210ENST00000619785 BICC1Q9H694 974 aaKnown RBP9.01□□□□□ -0.97
SENP3-210ENST00000619785 SRA1Q9HD15 236 aaKnown RBP9.01□□□□□ -0.97
SENP3-210ENST00000619785 MYO5AQ9Y4I1 1855 aaKnown RBP9.01□□□□□ -0.97
SENP3-210ENST00000619785 DDTLA6NHG4 134 aaPredicted RBP9□□□□□ -0.97
SENP3-210ENST00000619785 EREGO14944 169 aa9□□□□□ -0.97
SENP3-210ENST00000619785 IFIT1P09914 478 aaKnown RBP9□□□□□ -0.97
SENP3-210ENST00000619785 CES1P23141 567 aa9□□□□□ -0.97
SENP3-210ENST00000619785 GSTT1P30711 240 aa9□□□□□ -0.97
SENP3-210ENST00000619785 PABPC4Q13310 644 aaKnown RBP eCLIP9□□□□□ -0.97
SENP3-210ENST00000619785 METTL24Q5JXM2 366 aa9□□□□□ -0.97
SENP3-210ENST00000619785 GADL1Q6ZQY3 521 aa9□□□□□ -0.97
SENP3-210ENST00000619785 WDR63Q8IWG1 891 aa9□□□□□ -0.97
SENP3-210ENST00000619785 C1orf127Q8N9H9 656 aa9□□□□□ -0.97
SENP3-210ENST00000619785 WDR18Q9BV38 432 aa9□□□□□ -0.97
SENP3-210ENST00000619785 LNPKQ9C0E8 428 aa9□□□□□ -0.97
SENP3-210ENST00000619785 ASCC2Q9H1I8 757 aaPredicted RBP9□□□□□ -0.97
SENP3-210ENST00000619785 TTYH1Q9H313 450 aaPredicted RBP9□□□□□ -0.97
SENP3-210ENST00000619785 SEMA6BQ9H3T3 888 aa9□□□□□ -0.97
SENP3-210ENST00000619785 DDX4Q9NQI0 724 aaKnown RBP9□□□□□ -0.97
SENP3-210ENST00000619785 USP40Q9NVE5 1235 aa9□□□□□ -0.97
SENP3-210ENST00000619785 C9orf78Q9NZ63 289 aaPredicted RBP9□□□□□ -0.97
SENP3-210ENST00000619785 PIEZO1Q92508 2521 aa9□□□□□ -0.97
SENP3-210ENST00000619785 GBF1Q92538 1859 aa9□□□□□ -0.97
SENP3-210ENST00000619785 MYH1P12882 1939 aa8.99□□□□□ -0.97
SENP3-210ENST00000619785 CHD9Q3L8U1 2897 aa8.99□□□□□ -0.97
SENP3-210ENST00000619785 RHBDL3P58872 404 aa8.99□□□□□ -0.97
SENP3-210ENST00000619785 CACNB2Q08289 660 aaPredicted RBP8.99□□□□□ -0.97
SENP3-210ENST00000619785 ATG9AQ7Z3C6 839 aa8.99□□□□□ -0.97
SENP3-210ENST00000619785 MAFAQ8NHW3 353 aaPredicted RBP8.99□□□□□ -0.97
SENP3-210ENST00000619785 EHD4Q9H223 541 aa8.99□□□□□ -0.97
SENP3-210ENST00000619785 SUV39H2Q9H5I1 410 aa8.99□□□□□ -0.97
SENP3-210ENST00000619785 BRD7Q9NPI1 651 aa8.99□□□□□ -0.97
SENP3-210ENST00000619785 PLXNA1Q9UIW2 1896 aa8.99□□□□□ -0.97
SENP3-210ENST00000619785 GPR75-ASB3A0A0A6YYF3 556 aa8.98□□□□□ -0.97
SENP3-210ENST00000619785 TRIM75PA6NK02 468 aa8.98□□□□□ -0.97
SENP3-210ENST00000619785 TTLL8A6PVC2 850 aa8.98□□□□□ -0.97
SENP3-210ENST00000619785 EYA2O00167 538 aa8.98□□□□□ -0.97
SENP3-210ENST00000619785 FRAT2O75474 233 aaPredicted RBP8.98□□□□□ -0.97
SENP3-210ENST00000619785 CIAO1O76071 339 aa8.98□□□□□ -0.97
SENP3-210ENST00000619785 HOXC6P09630 235 aa8.98□□□□□ -0.97
SENP3-210ENST00000619785 CDK11BP21127 795 aaKnown RBP8.98□□□□□ -0.97
SENP3-210ENST00000619785 NOP9Q86U38 636 aaKnown RBP8.98□□□□□ -0.97
SENP3-210ENST00000619785 ZNF384Q8TF68 577 aa8.98□□□□□ -0.97
SENP3-210ENST00000619785 CHRDQ9H2X0 955 aa8.98□□□□□ -0.97
SENP3-210ENST00000619785 GPAMQ9HCL2 828 aa8.98□□□□□ -0.97
SENP3-210ENST00000619785 C11orf16Q9NQ32 467 aa8.98□□□□□ -0.97
SENP3-210ENST00000619785 GINM1Q9NU53 330 aa8.98□□□□□ -0.97
SENP3-210ENST00000619785 CNTN3Q9P232 1028 aa8.98□□□□□ -0.97
SENP3-210ENST00000619785 LRRFIP2Q9Y608 721 aaKnown RBP8.98□□□□□ -0.97
SENP3-210ENST00000619785 DNM1LO00429 736 aa8.97□□□□□ -0.97
SENP3-210ENST00000619785 MSCO60682 206 aa8.97□□□□□ -0.97
SENP3-210ENST00000619785 STK10O94804 968 aaKnown RBP8.97□□□□□ -0.97
SENP3-210ENST00000619785 SLC5A1P13866 664 aa8.97□□□□□ -0.97
SENP3-210ENST00000619785 EDN3P14138 238 aa8.97□□□□□ -0.97
SENP3-210ENST00000619785 CCND3P30281 292 aaPredicted RBP8.97□□□□□ -0.97
SENP3-210ENST00000619785 MAPK4P31152 587 aa8.97□□□□□ -0.97
SENP3-210ENST00000619785 PLA2G5P39877 138 aa8.97□□□□□ -0.97
SENP3-210ENST00000619785 CAP2P40123 477 aa8.97□□□□□ -0.97
SENP3-210ENST00000619785 PRR20EP86478 221 aa8.97□□□□□ -0.97
SENP3-210ENST00000619785 PRR20CP86479 221 aa8.97□□□□□ -0.97
SENP3-210ENST00000619785 PRR20DP86480 221 aa8.97□□□□□ -0.97
SENP3-210ENST00000619785 PRR20BP86481 221 aa8.97□□□□□ -0.97
SENP3-210ENST00000619785 PRR20AP86496 221 aa8.97□□□□□ -0.97
SENP3-210ENST00000619785 SPP2Q13103 211 aa8.97□□□□□ -0.97
SENP3-210ENST00000619785 PAK2Q13177 524 aa8.97□□□□□ -0.97
SENP3-210ENST00000619785 GRM2Q14416 872 aa8.97□□□□□ -0.97
SENP3-210ENST00000619785 RRP1BQ14684 758 aaKnown RBP8.97□□□□□ -0.97
SENP3-210ENST00000619785 MRPL14Q6P1L8 145 aaKnown RBP8.97□□□□□ -0.97
SENP3-210ENST00000619785 LBX2Q6XYB7 198 aa8.97□□□□□ -0.97
SENP3-210ENST00000619785 ZGPATQ8N5A5 531 aaKnown RBP8.97□□□□□ -0.97
SENP3-210ENST00000619785 APBA2Q99767 749 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms