RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 MCM6Q14566 821 aa33.53■■■□□ 2.96
KHSRP-213ENST00000619396 COBLL1Q53SF7 1204 aa33.53■■■□□ 2.96
KHSRP-213ENST00000619396 MIIPQ5JXC2 388 aa33.53■■■□□ 2.96
KHSRP-213ENST00000619396 DBNDD1Q9H9R9 158 aa33.53■■■□□ 2.96
KHSRP-213ENST00000619396 FCER1AP12319 257 aa33.52■■■□□ 2.96
KHSRP-213ENST00000619396 GNA11P29992 359 aa33.52■■■□□ 2.96
KHSRP-213ENST00000619396 ZBED6P86452 979 aa33.52■■■□□ 2.96
KHSRP-213ENST00000619396 WDR93Q6P2C0 686 aa33.52■■■□□ 2.96
KHSRP-213ENST00000619396 ZSCAN29Q8IWY8 852 aaPredicted RBP33.52■■■□□ 2.96
KHSRP-213ENST00000619396 TXLNBQ8N3L3 684 aa33.52■■■□□ 2.96
KHSRP-213ENST00000619396 NEK11Q8NG66 645 aa33.52■■■□□ 2.96
KHSRP-213ENST00000619396 ZNF622Q969S3 477 aaKnown RBP eCLIP33.52■■■□□ 2.961e-12■□□□□ 8.3
KHSRP-213ENST00000619396 EEF2KMTQ96G04 330 aa33.52■■■□□ 2.96
KHSRP-213ENST00000619396 HDAC6Q9UBN7 1215 aa33.52■■■□□ 2.96
KHSRP-213ENST00000619396 SMARCA1P28370 1054 aa33.52■■■□□ 2.96
KHSRP-213ENST00000619396 PPP1R2P41236 205 aa33.52■■■□□ 2.96
KHSRP-213ENST00000619396 HNRNPH2P55795 449 aaKnown RBP33.52■■■□□ 2.96
KHSRP-213ENST00000619396 ASIC1P78348 528 aa33.52■■■□□ 2.96
KHSRP-213ENST00000619396 CDC42EP5Q6NZY7 148 aa33.52■■■□□ 2.96
KHSRP-213ENST00000619396 GBP3Q9H0R5 595 aa33.52■■■□□ 2.96
KHSRP-213ENST00000619396 ADAM21Q9UKJ8 722 aa33.52■■■□□ 2.96
KHSRP-213ENST00000619396 ENC1O14682 589 aa33.51■■■□□ 2.96
KHSRP-213ENST00000619396 ATP1A1P05023 1023 aaKnown RBP33.51■■■□□ 2.96
KHSRP-213ENST00000619396 GYS2P54840 703 aa33.51■■■□□ 2.96
KHSRP-213ENST00000619396 FAM114A1Q8IWE2 563 aa33.51■■■□□ 2.96
KHSRP-213ENST00000619396 TRIM21P19474 475 aaKnown RBP33.51■■■□□ 2.95
KHSRP-213ENST00000619396 TECP42680 631 aa33.51■■■□□ 2.95
KHSRP-213ENST00000619396 NFIAQ12857 509 aa33.51■■■□□ 2.95
KHSRP-213ENST00000619396 EXOC4Q96A65 974 aa33.51■■■□□ 2.95
KHSRP-213ENST00000619396 PSD3Q9NYI0 1048 aa33.51■■■□□ 2.95
KHSRP-213ENST00000619396 SEC63Q9UGP8 760 aaKnown RBP33.51■■■□□ 2.95
KHSRP-213ENST00000619396 QSER1Q2KHR3 1735 aa33.5■■■□□ 2.95
KHSRP-213ENST00000619396 RCCD1A6NED2 376 aa33.5■■■□□ 2.95
KHSRP-213ENST00000619396 G3V3G9 751 aa33.5■■■□□ 2.95
KHSRP-213ENST00000619396 ALDH1B1P30837 517 aa33.5■■■□□ 2.95
KHSRP-213ENST00000619396 CYLC1P35663 651 aaPredicted RBP33.5■■■□□ 2.95
KHSRP-213ENST00000619396 DCAF8Q5TAQ9 597 aa33.5■■■□□ 2.95
KHSRP-213ENST00000619396 CCDC170Q8IYT3 715 aa33.5■■■□□ 2.95
KHSRP-213ENST00000619396 ERGIC2Q96RQ1 377 aa33.5■■■□□ 2.95
KHSRP-213ENST00000619396 NHEJ1Q9H9Q4 299 aaPredicted RBP33.5■■■□□ 2.95
KHSRP-213ENST00000619396 TMEM260Q9NX78 707 aa33.5■■■□□ 2.95
KHSRP-213ENST00000619396 BIN2Q9UBW5 565 aaPredicted RBP33.5■■■□□ 2.95
KHSRP-213ENST00000619396 EIF3CLB5ME19 914 aaKnown RBP33.49■■■□□ 2.95
KHSRP-213ENST00000619396 GPS2Q13227 327 aa33.49■■■□□ 2.95
KHSRP-213ENST00000619396 FIGNQ5HY92 759 aa33.49■■■□□ 2.95
KHSRP-213ENST00000619396 ZFPM1Q8IX07 1006 aa33.49■■■□□ 2.95
KHSRP-213ENST00000619396 JAKMIP2Q96AA8 810 aa33.49■■■□□ 2.95
KHSRP-213ENST00000619396 EIF3CQ99613 913 aaKnown RBP33.49■■■□□ 2.95
KHSRP-213ENST00000619396 LACRTQ9GZZ8 138 aa33.49■■■□□ 2.95
KHSRP-213ENST00000619396 ZNF219Q9P2Y4 722 aaPredicted RBP33.49■■■□□ 2.95
KHSRP-213ENST00000619396 SUGT1Q9Y2Z0 365 aa33.49■■■□□ 2.95
KHSRP-213ENST00000619396 SAR1BQ9Y6B6 198 aa33.49■■■□□ 2.95
KHSRP-213ENST00000619396 PDE6BP35913 854 aa33.49■■■□□ 2.95
KHSRP-213ENST00000619396 AMPD3Q01432 767 aa33.49■■■□□ 2.95
KHSRP-213ENST00000619396 APOBEC3HQ6NTF7 200 aaKnown RBP33.49■■■□□ 2.95
KHSRP-213ENST00000619396 KIAA0895Q8NCT3 520 aa33.49■■■□□ 2.95
KHSRP-213ENST00000619396 TBCKQ8TEA7 893 aa33.49■■■□□ 2.95
KHSRP-213ENST00000619396 GPCPD1Q9NPB8 672 aa33.49■■■□□ 2.95
KHSRP-213ENST00000619396 NKRFO15226 690 aaKnown RBP eCLIP33.48■■■□□ 2.95
KHSRP-213ENST00000619396 CDK17Q00537 523 aa33.48■■■□□ 2.95
KHSRP-213ENST00000619396 ORC2Q13416 577 aaPredicted RBP33.48■■■□□ 2.95
KHSRP-213ENST00000619396 COA7Q96BR5 231 aa33.48■■■□□ 2.95
KHSRP-213ENST00000619396 MASTLQ96GX5 879 aa33.48■■■□□ 2.95
KHSRP-213ENST00000619396 SEMA6BQ9H3T3 888 aa33.48■■■□□ 2.95
KHSRP-213ENST00000619396 ZNHIT6Q9NWK9 470 aaKnown RBP33.48■■■□□ 2.95
KHSRP-213ENST00000619396 SERPINB13Q9UIV8 391 aa33.48■■■□□ 2.95
KHSRP-213ENST00000619396 A0A1W2PQJ5 194 aa33.48■■■□□ 2.95
KHSRP-213ENST00000619396 KRT86O43790 486 aa33.48■■■□□ 2.95
KHSRP-213ENST00000619396 MTIF2P46199 727 aaKnown RBP33.48■■■□□ 2.95
KHSRP-213ENST00000619396 CACNB3P54284 484 aa33.48■■■□□ 2.95
KHSRP-213ENST00000619396 CASP8Q14790 479 aa33.48■■■□□ 2.95
KHSRP-213ENST00000619396 KIAA1328Q86T90 577 aa33.48■■■□□ 2.95
KHSRP-213ENST00000619396 MMS19Q96T76 1030 aa33.48■■■□□ 2.95
KHSRP-213ENST00000619396 NOC4LQ9BVI4 516 aaKnown RBP33.48■■■□□ 2.95
KHSRP-213ENST00000619396 RIOX1Q9H6W3 641 aa33.48■■■□□ 2.95
KHSRP-213ENST00000619396 IGKV6D-41A0A0C4DH26 115 aa33.47■■■□□ 2.95
KHSRP-213ENST00000619396 PLSCR1O15162 318 aa33.47■■■□□ 2.95
KHSRP-213ENST00000619396 USP14P54578 494 aa33.47■■■□□ 2.95
KHSRP-213ENST00000619396 EHBP1Q8NDI1 1231 aa33.47■■■□□ 2.95
KHSRP-213ENST00000619396 PLIN4Q96Q06 1357 aa33.47■■■□□ 2.95
KHSRP-213ENST00000619396 ESYT2A0FGR8 921 aa33.47■■■□□ 2.95
KHSRP-213ENST00000619396 SHMT1P34896 483 aa33.47■■■□□ 2.95
KHSRP-213ENST00000619396 SOGA3Q5TF21 947 aa33.47■■■□□ 2.95
KHSRP-213ENST00000619396 CNNM4Q6P4Q7 775 aa33.47■■■□□ 2.95
KHSRP-213ENST00000619396 PURBQ96QR8 312 aaKnown RBP33.47■■■□□ 2.95
KHSRP-213ENST00000619396 EIF3JO75822 258 aaKnown RBP33.46■■■□□ 2.95
KHSRP-213ENST00000619396 CENPPQ6IPU0 288 aa33.46■■■□□ 2.95
KHSRP-213ENST00000619396 POTEDQ86YR6 584 aa33.46■■■□□ 2.95
KHSRP-213ENST00000619396 MTMR9Q96QG7 549 aa33.46■■■□□ 2.95
KHSRP-213ENST00000619396 GRB10Q13322 594 aa33.45■■■□□ 2.95
KHSRP-213ENST00000619396 HPS3Q969F9 1004 aa33.45■■■□□ 2.95
KHSRP-213ENST00000619396 BLOC1S4Q9NUP1 217 aa33.45■■■□□ 2.95
KHSRP-213ENST00000619396 SRGAP2O75044 1071 aa33.45■■■□□ 2.95
KHSRP-213ENST00000619396 TEKT1Q969V4 418 aa33.45■■■□□ 2.95
KHSRP-213ENST00000619396 CALML4Q96GE6 196 aa33.45■■■□□ 2.95
KHSRP-213ENST00000619396 N4BP1O75113 896 aaKnown RBP33.44■■■□□ 2.94
KHSRP-213ENST00000619396 KIAA0825Q8IV33 1275 aa33.44■■■□□ 2.94
KHSRP-213ENST00000619396 FAM196BA6NMK8 535 aa33.44■■■□□ 2.94
KHSRP-213ENST00000619396 SHROOM1Q2M3G4 852 aaPredicted RBP33.44■■■□□ 2.94
KHSRP-213ENST00000619396 TTBK2Q6IQ55 1244 aa33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms