RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 FAM153AQ9UHL3 310 aa15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 UFL1O94874 794 aa15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 TMOD1P28289 359 aa15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 TRADDQ15628 312 aa15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 GPKOWQ92917 476 aaPredicted RBP eCLIP15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 TACO1Q9BSH4 297 aaKnown RBP15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 FOXP1Q9H334 677 aaPredicted RBP15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 GOPCQ9HD26 462 aa15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 STK32BQ9NY57 414 aa15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 NR1D1P20393 614 aa15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 DDR1Q08345 913 aa15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 RBM12Q9NTZ6 932 aaKnown RBP15.19■□□□□ 0.02
CNTNAP3B-215ENST00000619138 TNKSO95271 1327 aa15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 XDHP47989 1333 aa15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 TMCO5BA8MYB1 307 aa15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 MEFVO15553 781 aaPredicted RBP15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 CPLX4Q7Z7G2 160 aa15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 DNAAF5Q86Y56 855 aa15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 SUGP1Q8IWZ8 645 aaKnown RBP15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 NLGN1Q8N2Q7 840 aa15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 ZHX3Q9H4I2 956 aa15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 VIPAS39Q9H9C1 493 aa15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 PDE4DQ08499 809 aa15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 CATIPQ7Z7H3 387 aa15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 LCORLQ8N3X6 602 aa15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 KRT23Q9C075 422 aa15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 ANKRD2Q9GZV1 360 aa15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 HAUS2Q9NVX0 235 aa15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 ZNF804BA4D1E1 1349 aa15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 LSP1P33241 339 aa15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 FAM47AQ5JRC9 791 aa15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 SLC10A5Q5PT55 438 aa15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 RBM17Q96I25 401 aaKnown RBP15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 GOLPH3Q9H4A6 298 aa15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 RGS17Q9UGC6 210 aaPredicted RBP15.18■□□□□ 0.02
CNTNAP3B-215ENST00000619138 EIF4A3P38919 411 aaKnown RBP15.17■□□□□ 0.02
CNTNAP3B-215ENST00000619138 VEZTQ9HBM0 779 aa15.17■□□□□ 0.02
CNTNAP3B-215ENST00000619138 KLC4Q9NSK0 619 aa15.17■□□□□ 0.02
CNTNAP3B-215ENST00000619138 GGT7Q9UJ14 662 aa15.17■□□□□ 0.02
CNTNAP3B-215ENST00000619138 EHHADHQ08426 723 aa15.17■□□□□ 0.02
CNTNAP3B-215ENST00000619138 UBE4AQ14139 1066 aa15.17■□□□□ 0.02
CNTNAP3B-215ENST00000619138 NAA35Q5VZE5 725 aa15.17■□□□□ 0.02
CNTNAP3B-215ENST00000619138 DYMQ7RTS9 669 aa15.17■□□□□ 0.02
CNTNAP3B-215ENST00000619138 ADAT2Q7Z6V5 191 aaKnown RBP15.17■□□□□ 0.02
CNTNAP3B-215ENST00000619138 AMOTL1Q8IY63 956 aa15.17■□□□□ 0.02
CNTNAP3B-215ENST00000619138 STRBPQ96SI9 672 aaKnown RBP15.17■□□□□ 0.02
CNTNAP3B-215ENST00000619138 EPB41L4AQ9HCS5 686 aaPredicted RBP15.17■□□□□ 0.02
CNTNAP3B-215ENST00000619138 STIM2Q9P246 746 aa15.17■□□□□ 0.02
CNTNAP3B-215ENST00000619138 PSMD14O00487 310 aa15.17■□□□□ 0.02
CNTNAP3B-215ENST00000619138 FGFR2P21802 821 aa15.17■□□□□ 0.02
CNTNAP3B-215ENST00000619138 AARSP49588 968 aaKnown RBP eCLIP15.17■□□□□ 0.02
CNTNAP3B-215ENST00000619138 TRIM14Q14142 442 aa15.17■□□□□ 0.02
CNTNAP3B-215ENST00000619138 DDX42Q86XP3 938 aaKnown RBP eCLIP15.17■□□□□ 0.02
CNTNAP3B-215ENST00000619138 ZNF473Q8WTR7 871 aaKnown RBP15.17■□□□□ 0.02
CNTNAP3B-215ENST00000619138 CCT8L2Q96SF2 557 aa15.17■□□□□ 0.02
CNTNAP3B-215ENST00000619138 EXOC1Q9NV70 894 aa15.17■□□□□ 0.02
CNTNAP3B-215ENST00000619138 NMT2O60551 498 aa15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 PAX7P23759 505 aa15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 IFFO1Q0D2I5 559 aa15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 GRAPQ13588 217 aa15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 TXNRD3Q86VQ6 643 aa15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 GRAPLQ8TC17 118 aaPredicted RBP15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 TCP11Q8WWU5 503 aa15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 SLC39A2Q9NP94 309 aa15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 AATFQ9NY61 560 aaKnown RBP eCLIP15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 THSD7AQ9UPZ6 1657 aa15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 CLTAP09496 248 aa15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 EZRP15311 586 aaKnown RBP15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 EPHB4P54760 987 aa15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 NEDD9Q14511 834 aa15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 CNOT6LQ96LI5 555 aaKnown RBP15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 OSBPL9Q96SU4 736 aa15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 RWDD2AQ9UIY3 292 aa15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 VEGFAP15692 232 aaPredicted RBP15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 PBX1P40424 430 aa15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 PRPF4BQ13523 1007 aaKnown RBP15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 WDR59Q6PJI9 974 aa15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 IQCA1Q86XH1 822 aa15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 CCDC47Q96A33 483 aaKnown RBP15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 FAM84BQ96KN1 310 aaPredicted RBP15.16■□□□□ 0.02
CNTNAP3B-215ENST00000619138 GFPT1Q06210 699 aaPredicted RBP15.15■□□□□ 0.02
CNTNAP3B-215ENST00000619138 PPP1R7Q15435 360 aa15.15■□□□□ 0.02
CNTNAP3B-215ENST00000619138 SELENOSQ9BQE4 189 aa15.15■□□□□ 0.02
CNTNAP3B-215ENST00000619138 VAT1LQ9HCJ6 419 aa15.15■□□□□ 0.02
CNTNAP3B-215ENST00000619138 F8W031 263 aaPredicted RBP15.15■□□□□ 0.02
CNTNAP3B-215ENST00000619138 NLRP14Q86W24 1093 aa15.15■□□□□ 0.02
CNTNAP3B-215ENST00000619138 DZIP1Q86YF9 867 aaKnown RBP15.15■□□□□ 0.02
CNTNAP3B-215ENST00000619138 CCDC155Q8N6L0 562 aa15.15■□□□□ 0.02
CNTNAP3B-215ENST00000619138 PRPF38AQ8NAV1 312 aaKnown RBP15.15■□□□□ 0.02
CNTNAP3B-215ENST00000619138 FBXO41Q8TF61 875 aa15.15■□□□□ 0.02
CNTNAP3B-215ENST00000619138 LIMA1Q9UHB6 759 aaKnown RBP15.15■□□□□ 0.02
CNTNAP3B-215ENST00000619138 CCDC194A0A1B0GVG4 234 aa15.15■□□□□ 0.02
CNTNAP3B-215ENST00000619138 OPLAHO14841 1288 aa15.15■□□□□ 0.02
CNTNAP3B-215ENST00000619138 GTPBP6O43824 516 aaPredicted RBP15.15■□□□□ 0.02
CNTNAP3B-215ENST00000619138 BAG6P46379 1132 aa15.15■□□□□ 0.02
CNTNAP3B-215ENST00000619138 CCDC13Q8IYE1 715 aa15.15■□□□□ 0.02
CNTNAP3B-215ENST00000619138 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.15■□□□□ 0.02
CNTNAP3B-215ENST00000619138 RMND1Q9NWS8 449 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms