RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 CENPPQ6IPU0 288 aa21.49■■□□□ 1.03
PCDHGB3-202ENST00000618934 CCDC47Q96A33 483 aaKnown RBP21.49■■□□□ 1.03
PCDHGB3-202ENST00000618934 MMS19Q96T76 1030 aa21.49■■□□□ 1.03
PCDHGB3-202ENST00000618934 THSD7AQ9UPZ6 1657 aa21.48■■□□□ 1.03
PCDHGB3-202ENST00000618934 ADCY7P51828 1080 aa21.48■■□□□ 1.03
PCDHGB3-202ENST00000618934 ZBED6P86452 979 aa21.48■■□□□ 1.03
PCDHGB3-202ENST00000618934 AMPD3Q01432 767 aa21.48■■□□□ 1.03
PCDHGB3-202ENST00000618934 LRRC41Q15345 812 aa21.48■■□□□ 1.03
PCDHGB3-202ENST00000618934 KIAA1328Q86T90 577 aa21.48■■□□□ 1.03
PCDHGB3-202ENST00000618934 CERS3Q8IU89 383 aa21.48■■□□□ 1.03
PCDHGB3-202ENST00000618934 CERS5Q8N5B7 392 aa21.48■■□□□ 1.03
PCDHGB3-202ENST00000618934 JAKMIP2Q96AA8 810 aa21.48■■□□□ 1.03
PCDHGB3-202ENST00000618934 N4BP1O75113 896 aaKnown RBP21.48■■□□□ 1.03
PCDHGB3-202ENST00000618934 SLC16A2P36021 539 aa21.48■■□□□ 1.03
PCDHGB3-202ENST00000618934 DDR1Q08345 913 aa21.48■■□□□ 1.03
PCDHGB3-202ENST00000618934 CNNM4Q6P4Q7 775 aa21.48■■□□□ 1.03
PCDHGB3-202ENST00000618934 LARP4BQ92615 738 aaKnown RBP21.48■■□□□ 1.03
PCDHGB3-202ENST00000618934 CAPZA3Q96KX2 299 aa21.48■■□□□ 1.03
PCDHGB3-202ENST00000618934 ERGIC2Q96RQ1 377 aa21.48■■□□□ 1.03
PCDHGB3-202ENST00000618934 JMJD4Q9H9V9 463 aa21.48■■□□□ 1.03
PCDHGB3-202ENST00000618934 PDE11AQ9HCR9 933 aa21.48■■□□□ 1.03
PCDHGB3-202ENST00000618934 TNNI2P48788 182 aa21.47■■□□□ 1.03
PCDHGB3-202ENST00000618934 FXR2P51116 673 aaKnown RBP eCLIP21.47■■□□□ 1.03
PCDHGB3-202ENST00000618934 NEK11Q8NG66 645 aa21.47■■□□□ 1.03
PCDHGB3-202ENST00000618934 PODXL2Q9NZ53 605 aa21.47■■□□□ 1.03
PCDHGB3-202ENST00000618934 FOCADQ5VW36 1801 aa21.47■■□□□ 1.03
PCDHGB3-202ENST00000618934 IGKV6D-41A0A0C4DH26 115 aa21.47■■□□□ 1.03
PCDHGB3-202ENST00000618934 ATP2B2Q01814 1243 aa21.47■■□□□ 1.03
PCDHGB3-202ENST00000618934 ADGRF4Q8IZF3 695 aa21.47■■□□□ 1.03
PCDHGB3-202ENST00000618934 SMCR8Q8TEV9 937 aaPredicted RBP21.47■■□□□ 1.03
PCDHGB3-202ENST00000618934 NUP58Q9BVL2 599 aa21.47■■□□□ 1.03
PCDHGB3-202ENST00000618934 ZNF185O15231 689 aa21.46■■□□□ 1.03
PCDHGB3-202ENST00000618934 SNHG28P0DPA3 235 aa21.46■■□□□ 1.03
PCDHGB3-202ENST00000618934 SIK3Q9Y2K2 1263 aa21.46■■□□□ 1.03
PCDHGB3-202ENST00000618934 MACROD2A1Z1Q3 448 aa21.46■■□□□ 1.03
PCDHGB3-202ENST00000618934 EIF3CLB5ME19 914 aaKnown RBP21.46■■□□□ 1.03
PCDHGB3-202ENST00000618934 BBOX1O75936 387 aa21.46■■□□□ 1.03
PCDHGB3-202ENST00000618934 IDEP14735 1019 aa21.46■■□□□ 1.03
PCDHGB3-202ENST00000618934 KRT83P78385 493 aa21.46■■□□□ 1.03
PCDHGB3-202ENST00000618934 UNC13DQ70J99 1090 aa21.46■■□□□ 1.03
PCDHGB3-202ENST00000618934 FAM114A1Q8IWE2 563 aa21.46■■□□□ 1.03
PCDHGB3-202ENST00000618934 EIF3CQ99613 913 aaKnown RBP21.46■■□□□ 1.03
PCDHGB3-202ENST00000618934 FAM207AQ9NSI2 230 aaPredicted RBP21.46■■□□□ 1.03
PCDHGB3-202ENST00000618934 MYH7BA7E2Y1 1941 aa21.45■■□□□ 1.02
PCDHGB3-202ENST00000618934 POTEB2H3BUK9 544 aa21.45■■□□□ 1.02
PCDHGB3-202ENST00000618934 SCNN1DP51172 638 aa21.45■■□□□ 1.02
PCDHGB3-202ENST00000618934 COBLL1Q53SF7 1204 aa21.45■■□□□ 1.02
PCDHGB3-202ENST00000618934 PAPD7Q5XG87 772 aaKnown RBP21.45■■□□□ 1.02
PCDHGB3-202ENST00000618934 CCDC155Q8N6L0 562 aa21.45■■□□□ 1.02
PCDHGB3-202ENST00000618934 RETREG2Q8NC44 543 aa21.45■■□□□ 1.02
PCDHGB3-202ENST00000618934 SNX29Q8TEQ0 813 aa21.45■■□□□ 1.02
PCDHGB3-202ENST00000618934 TBC1D22AQ8WUA7 517 aa21.45■■□□□ 1.02
PCDHGB3-202ENST00000618934 RAD54LQ92698 747 aa21.45■■□□□ 1.02
PCDHGB3-202ENST00000618934 DDX12PQ92771 950 aa21.45■■□□□ 1.02
PCDHGB3-202ENST00000618934 HAS1Q92839 578 aa21.45■■□□□ 1.02
PCDHGB3-202ENST00000618934 ZNHIT6Q9NWK9 470 aaKnown RBP21.45■■□□□ 1.02
PCDHGB3-202ENST00000618934 SAR1BQ9Y6B6 198 aa21.45■■□□□ 1.02
PCDHGB3-202ENST00000618934 CYLC1P35663 651 aaPredicted RBP21.45■■□□□ 1.02
PCDHGB3-202ENST00000618934 VWA3BQ502W6 1294 aa21.45■■□□□ 1.02
PCDHGB3-202ENST00000618934 ASPRV1Q53RT3 343 aa21.45■■□□□ 1.02
PCDHGB3-202ENST00000618934 SLF2Q8IX21 1173 aa21.45■■□□□ 1.02
PCDHGB3-202ENST00000618934 ARHGAP20Q9P2F6 1191 aa21.45■■□□□ 1.02
PCDHGB3-202ENST00000618934 PLIN4Q96Q06 1357 aa21.44■■□□□ 1.02
PCDHGB3-202ENST00000618934 MYH10P35580 1976 aa21.44■■□□□ 1.02
PCDHGB3-202ENST00000618934 PDE2AO00408 941 aaPredicted RBP21.44■■□□□ 1.02
PCDHGB3-202ENST00000618934 FAM193AP78312 1265 aa21.44■■□□□ 1.02
PCDHGB3-202ENST00000618934 ZNF543Q08ER8 600 aa21.44■■□□□ 1.02
PCDHGB3-202ENST00000618934 SHROOM1Q2M3G4 852 aaPredicted RBP21.44■■□□□ 1.02
PCDHGB3-202ENST00000618934 KCTD1Q719H9 257 aa21.44■■□□□ 1.02
PCDHGB3-202ENST00000618934 HDXQ7Z353 690 aa21.44■■□□□ 1.02
PCDHGB3-202ENST00000618934 CDK5RAP3Q96JB5 506 aa21.44■■□□□ 1.02
PCDHGB3-202ENST00000618934 NDST4Q9H3R1 872 aa21.44■■□□□ 1.02
PCDHGB3-202ENST00000618934 UBR3Q6ZT12 1888 aa21.44■■□□□ 1.02
PCDHGB3-202ENST00000618934 ZNF662Q6ZS27 426 aa21.44■■□□□ 1.02
PCDHGB3-202ENST00000618934 FGFBP2Q9BYJ0 223 aa21.44■■□□□ 1.02
PCDHGB3-202ENST00000618934 STK17AQ9UEE5 414 aa21.44■■□□□ 1.02
PCDHGB3-202ENST00000618934 ADAMTSL1Q8N6G6 1762 aa21.43■■□□□ 1.02
PCDHGB3-202ENST00000618934 USP17L10C9JJH3 530 aa21.43■■□□□ 1.02
PCDHGB3-202ENST00000618934 KRT86O43790 486 aa21.43■■□□□ 1.02
PCDHGB3-202ENST00000618934 HOXA10P31260 410 aaPredicted RBP21.43■■□□□ 1.02
PCDHGB3-202ENST00000618934 SHMT1P34896 483 aa21.43■■□□□ 1.02
PCDHGB3-202ENST00000618934 FKBP15Q5T1M5 1219 aa21.43■■□□□ 1.02
PCDHGB3-202ENST00000618934 CCDC170Q8IYT3 715 aa21.43■■□□□ 1.02
PCDHGB3-202ENST00000618934 PVALEFA0A1B0GWK0 134 aa21.43■■□□□ 1.02
PCDHGB3-202ENST00000618934 A0A1W2PQJ5 194 aa21.43■■□□□ 1.02
PCDHGB3-202ENST00000618934 ORC2Q13416 577 aaPredicted RBP21.43■■□□□ 1.02
PCDHGB3-202ENST00000618934 TMEM266Q2M3C6 531 aa21.43■■□□□ 1.02
PCDHGB3-202ENST00000618934 LRRC55Q6ZSA7 311 aa21.43■■□□□ 1.02
PCDHGB3-202ENST00000618934 C2CD5Q86YS7 1000 aa21.43■■□□□ 1.02
PCDHGB3-202ENST00000618934 PURBQ96QR8 312 aaKnown RBP21.43■■□□□ 1.02
PCDHGB3-202ENST00000618934 RIC8AQ9NPQ8 531 aa21.43■■□□□ 1.02
PCDHGB3-202ENST00000618934 ADAM21Q9UKJ8 722 aa21.43■■□□□ 1.02
PCDHGB3-202ENST00000618934 PNMA6FA0A0J9YX94 578 aa21.42■■□□□ 1.02
PCDHGB3-202ENST00000618934 LRRIQ3A6PVS8 624 aaPredicted RBP21.42■■□□□ 1.02
PCDHGB3-202ENST00000618934 ZMYND10O75800 440 aa21.42■■□□□ 1.02
PCDHGB3-202ENST00000618934 TTLL1O95922 423 aa21.42■■□□□ 1.02
PCDHGB3-202ENST00000618934 CLK2P49760 499 aaKnown RBP21.42■■□□□ 1.02
PCDHGB3-202ENST00000618934 EHHADHQ08426 723 aa21.42■■□□□ 1.02
PCDHGB3-202ENST00000618934 PDIA5Q14554 519 aa21.42■■□□□ 1.02
PCDHGB3-202ENST00000618934 CASP8Q14790 479 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms