RNA–Protein interactions for RNA: ENST00000618865.4

SEMA3B-213, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SEMA3B, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-213ENST00000618865 DYMQ7RTS9 669 aa18.8■□□□□ 0.6
SEMA3B-213ENST00000618865 CNOT6LQ96LI5 555 aaKnown RBP18.8■□□□□ 0.6
SEMA3B-213ENST00000618865 MAGEC2Q9UBF1 373 aaPredicted RBP18.8■□□□□ 0.6
SEMA3B-213ENST00000618865 PNMA6AP0CW24 399 aaPredicted RBP18.8■□□□□ 0.6
SEMA3B-213ENST00000618865 CALML4Q96GE6 196 aa18.8■□□□□ 0.6
SEMA3B-213ENST00000618865 GREB1LQ9C091 1923 aaPredicted RBP18.8■□□□□ 0.6
SEMA3B-213ENST00000618865 A0A1W2PQC6 194 aa18.8■□□□□ 0.6
SEMA3B-213ENST00000618865 ECM1Q16610 540 aa18.8■□□□□ 0.6
SEMA3B-213ENST00000618865 DNAJC18Q9H819 358 aa18.8■□□□□ 0.6
SEMA3B-213ENST00000618865 ARFGEF1Q9Y6D6 1849 aa18.79■□□□□ 0.6
SEMA3B-213ENST00000618865 NDUFA10O95299 355 aa18.79■□□□□ 0.6
SEMA3B-213ENST00000618865 MIIPQ5JXC2 388 aa18.79■□□□□ 0.6
SEMA3B-213ENST00000618865 GLIS3Q8NEA6 775 aa18.79■□□□□ 0.6
SEMA3B-213ENST00000618865 OR8K1Q8NGG5 319 aa18.79■□□□□ 0.6
SEMA3B-213ENST00000618865 DNAJC7Q99615 494 aa18.79■□□□□ 0.6
SEMA3B-213ENST00000618865 CAPN11Q9UMQ6 739 aa18.79■□□□□ 0.6
SEMA3B-213ENST00000618865 LUC7L2Q9Y383 392 aaKnown RBP18.79■□□□□ 0.6
SEMA3B-213ENST00000618865 EPN1Q9Y6I3 576 aaPredicted RBP18.79■□□□□ 0.6
SEMA3B-213ENST00000618865 SIPA1L1O43166 1804 aa18.79■□□□□ 0.6
SEMA3B-213ENST00000618865 FXR2P51116 673 aaKnown RBP eCLIP18.79■□□□□ 0.6
SEMA3B-213ENST00000618865 COL23A1Q86Y22 540 aaPredicted RBP18.79■□□□□ 0.6
SEMA3B-213ENST00000618865 PARD6BQ9BYG5 372 aa18.79■□□□□ 0.6
SEMA3B-213ENST00000618865 TTYH3Q9C0H2 523 aa18.79■□□□□ 0.6
SEMA3B-213ENST00000618865 DBNDD1Q9H9R9 158 aa18.79■□□□□ 0.6
SEMA3B-213ENST00000618865 PNMA6FA0A0J9YX94 578 aa18.78■□□□□ 0.6
SEMA3B-213ENST00000618865 CCDC96Q2M329 555 aa18.78■□□□□ 0.6
SEMA3B-213ENST00000618865 KIF4BQ2VIQ3 1234 aa18.78■□□□□ 0.6
SEMA3B-213ENST00000618865 PLA2G4AP47712 749 aa18.78■□□□□ 0.6
SEMA3B-213ENST00000618865 DNM2P50570 870 aa18.78■□□□□ 0.6
SEMA3B-213ENST00000618865 TMCO3Q6UWJ1 677 aa18.78■□□□□ 0.6
SEMA3B-213ENST00000618865 SV2BQ7L1I2 683 aa18.78■□□□□ 0.6
SEMA3B-213ENST00000618865 RIC8AQ9NPQ8 531 aa18.78■□□□□ 0.6
SEMA3B-213ENST00000618865 CDC23Q9UJX2 597 aa18.78■□□□□ 0.6
SEMA3B-213ENST00000618865 hCG_1984214I3L0E3 225 aa18.77■□□□□ 0.6
SEMA3B-213ENST00000618865 CLK2P49760 499 aaKnown RBP18.77■□□□□ 0.6
SEMA3B-213ENST00000618865 HERVK_113P62684 666 aa18.77■□□□□ 0.6
SEMA3B-213ENST00000618865 TCP10Q12799 353 aa18.77■□□□□ 0.6
SEMA3B-213ENST00000618865 BMS1Q14692 1282 aaKnown RBP18.77■□□□□ 0.6
SEMA3B-213ENST00000618865 KRT27Q7Z3Y8 459 aa18.77■□□□□ 0.6
SEMA3B-213ENST00000618865 TMC4Q7Z404 712 aa18.77■□□□□ 0.6
SEMA3B-213ENST00000618865 ZNF713Q8N859 430 aaPredicted RBP18.77■□□□□ 0.6
SEMA3B-213ENST00000618865 HAS1Q92839 578 aa18.77■□□□□ 0.6
SEMA3B-213ENST00000618865 SUGT1Q9Y2Z0 365 aa18.77■□□□□ 0.6
SEMA3B-213ENST00000618865 RAD21O60216 631 aa18.77■□□□□ 0.6
SEMA3B-213ENST00000618865 SASH3O75995 380 aa18.77■□□□□ 0.6
SEMA3B-213ENST00000618865 TBC1D8BQ0IIM8 1120 aa18.77■□□□□ 0.6
SEMA3B-213ENST00000618865 GPR161Q8N6U8 529 aaKnown RBP18.77■□□□□ 0.6
SEMA3B-213ENST00000618865 SNX29Q8TEQ0 813 aa18.77■□□□□ 0.6
SEMA3B-213ENST00000618865 LARP4BQ92615 738 aaKnown RBP18.77■□□□□ 0.6
SEMA3B-213ENST00000618865 GOLGA1Q92805 767 aa18.77■□□□□ 0.6
SEMA3B-213ENST00000618865 CTAGE9A4FU28 777 aa18.77■□□□□ 0.59
SEMA3B-213ENST00000618865 ERCC3P19447 782 aa18.77■□□□□ 0.59
SEMA3B-213ENST00000618865 MTIF2P46199 727 aaKnown RBP18.77■□□□□ 0.59
SEMA3B-213ENST00000618865 AMPD3Q01432 767 aa18.77■□□□□ 0.59
SEMA3B-213ENST00000618865 SRGAP1Q7Z6B7 1085 aa18.77■□□□□ 0.59
SEMA3B-213ENST00000618865 NOC3LQ8WTT2 800 aaKnown RBP18.77■□□□□ 0.59
SEMA3B-213ENST00000618865 CCDC47Q96A33 483 aaKnown RBP18.77■□□□□ 0.59
SEMA3B-213ENST00000618865 ARGLU1Q9NWB6 273 aaPredicted RBP18.77■□□□□ 0.59
SEMA3B-213ENST00000618865 SWAP70Q9UH65 585 aa18.77■□□□□ 0.59
SEMA3B-213ENST00000618865 SCN9AQ15858 1988 aa18.76■□□□□ 0.59
SEMA3B-213ENST00000618865 BICDL2A1A5D9 508 aa18.76■□□□□ 0.59
SEMA3B-213ENST00000618865 CHMP4BP1P59074 171 aa18.76■□□□□ 0.59
SEMA3B-213ENST00000618865 ORC2Q13416 577 aaPredicted RBP18.76■□□□□ 0.59
SEMA3B-213ENST00000618865 CNNM4Q6P4Q7 775 aa18.76■□□□□ 0.59
SEMA3B-213ENST00000618865 RABGGTAQ92696 567 aa18.76■□□□□ 0.59
SEMA3B-213ENST00000618865 TEKT1Q969V4 418 aa18.76■□□□□ 0.59
SEMA3B-213ENST00000618865 NOC4LQ9BVI4 516 aaKnown RBP18.76■□□□□ 0.59
SEMA3B-213ENST00000618865 GUCA1BQ9UMX6 200 aa18.76■□□□□ 0.59
SEMA3B-213ENST00000618865 NPR1P16066 1061 aa18.76■□□□□ 0.59
SEMA3B-213ENST00000618865 CRKP46108 304 aa18.76■□□□□ 0.59
SEMA3B-213ENST00000618865 SEMA3FQ13275 785 aa18.76■□□□□ 0.59
SEMA3B-213ENST00000618865 LRRC41Q15345 812 aa18.76■□□□□ 0.59
SEMA3B-213ENST00000618865 CC2D1AQ6P1N0 951 aaPredicted RBP18.76■□□□□ 0.59
SEMA3B-213ENST00000618865 ZNF771Q7L3S4 317 aaPredicted RBP18.76■□□□□ 0.59
SEMA3B-213ENST00000618865 RAD54LQ92698 747 aa18.76■□□□□ 0.59
SEMA3B-213ENST00000618865 TMEM266Q2M3C6 531 aa18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 CENPPQ6IPU0 288 aa18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 KIAA0825Q8IV33 1275 aa18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 CDK5RAP3Q96JB5 506 aa18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 PRDM16Q9HAZ2 1276 aa18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 DDX25Q9UHL0 483 aaKnown RBP18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 DDTLA6NHG4 134 aaPredicted RBP18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 USP17L15C9J2P7 530 aa18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 USP17L13C9JLJ4 530 aa18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 USP17L11C9JVI0 530 aa18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 USP17L18D6R9N7 530 aa18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 USP17L22D6RA61 530 aa18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 USP17L17D6RBQ6 530 aa18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 USP17L19D6RCP7 530 aa18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 USP17L20D6RJB6 530 aa18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 TRIM21P19474 475 aaKnown RBP18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 IRX5P78411 483 aaPredicted RBP18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 USP17L24Q0WX57 530 aa18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 MSL1Q68DK7 614 aa18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 USP17L6PQ6QN14 398 aa18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 UNC13DQ70J99 1090 aa18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 GPIHBP1Q8IV16 184 aa18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 NAPGQ99747 312 aaPredicted RBP18.75■□□□□ 0.59
SEMA3B-213ENST00000618865 RCCD1A6NED2 376 aa18.74■□□□□ 0.59
SEMA3B-213ENST00000618865 ZBTB5O15062 677 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms