RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.52■□□□□ 0.56
BRCA1-228ENST00000618469 CFBP00751 764 aa18.52■□□□□ 0.56
BRCA1-228ENST00000618469 HMGB1P09429 215 aaKnown RBP18.52■□□□□ 0.56
BRCA1-228ENST00000618469 CPA1P15085 419 aa18.52■□□□□ 0.56
BRCA1-228ENST00000618469 EXOSC10Q01780 885 aaKnown RBP18.52■□□□□ 0.56
BRCA1-228ENST00000618469 PDE4DQ08499 809 aa18.52■□□□□ 0.56
BRCA1-228ENST00000618469 PWP2Q15269 919 aaKnown RBP18.52■□□□□ 0.56
BRCA1-228ENST00000618469 NOL8Q76FK4 1167 aaKnown RBP18.52■□□□□ 0.56
BRCA1-228ENST00000618469 DNERQ8NFT8 737 aa18.52■□□□□ 0.56
BRCA1-228ENST00000618469 SYTL5Q8TDW5 730 aaPredicted RBP18.52■□□□□ 0.56
BRCA1-228ENST00000618469 TBC1D5Q92609 795 aa18.52■□□□□ 0.56
BRCA1-228ENST00000618469 KCNB2Q92953 911 aa18.52■□□□□ 0.56
BRCA1-228ENST00000618469 SPZ1Q9BXG8 430 aa18.52■□□□□ 0.56
BRCA1-228ENST00000618469 PNMA6FA0A0J9YX94 578 aa18.51■□□□□ 0.55
BRCA1-228ENST00000618469 MYADML2A6NDP7 307 aa18.51■□□□□ 0.55
BRCA1-228ENST00000618469 OPLAHO14841 1288 aa18.51■□□□□ 0.55
BRCA1-228ENST00000618469 C6orf222P0C671 652 aaPredicted RBP18.51■□□□□ 0.55
BRCA1-228ENST00000618469 GNAQP50148 359 aa18.51■□□□□ 0.55
BRCA1-228ENST00000618469 FGD1P98174 961 aa18.51■□□□□ 0.55
BRCA1-228ENST00000618469 TNFAIP2Q03169 654 aa18.51■□□□□ 0.55
BRCA1-228ENST00000618469 APOA5Q6Q788 366 aa18.51■□□□□ 0.55
BRCA1-228ENST00000618469 SYNE3Q6ZMZ3 975 aa18.51■□□□□ 0.55
BRCA1-228ENST00000618469 CMTR1Q8N1G2 835 aaKnown RBP18.51■□□□□ 0.55
BRCA1-228ENST00000618469 RRP36Q96EU6 259 aaKnown RBP18.51■□□□□ 0.55
BRCA1-228ENST00000618469 SPC25Q9HBM1 224 aa18.51■□□□□ 0.55
BRCA1-228ENST00000618469 PDGFCQ9NRA1 345 aa18.51■□□□□ 0.55
BRCA1-228ENST00000618469 COL20A1Q9P218 1284 aa18.51■□□□□ 0.55
BRCA1-228ENST00000618469 SEC63Q9UGP8 760 aaKnown RBP18.51■□□□□ 0.55
BRCA1-228ENST00000618469 PHF24Q9UPV7 400 aa18.51■□□□□ 0.55
BRCA1-228ENST00000618469 MYO9BQ13459 2157 aa18.51■□□□□ 0.55
BRCA1-228ENST00000618469 EDNRBP24530 442 aa18.5■□□□□ 0.55
BRCA1-228ENST00000618469 IRX5P78411 483 aaPredicted RBP18.5■□□□□ 0.55
BRCA1-228ENST00000618469 TRAF1Q13077 416 aa18.5■□□□□ 0.55
BRCA1-228ENST00000618469 SNX17Q15036 470 aa18.5■□□□□ 0.55
BRCA1-228ENST00000618469 TAPT1Q6NXT6 567 aa18.5■□□□□ 0.55
BRCA1-228ENST00000618469 BLOC1S2Q6QNY1 142 aa18.5■□□□□ 0.55
BRCA1-228ENST00000618469 TMTC3Q6ZXV5 915 aa18.5■□□□□ 0.55
BRCA1-228ENST00000618469 TLK2Q86UE8 772 aa18.5■□□□□ 0.55
BRCA1-228ENST00000618469 SRBD1Q8N5C6 995 aaKnown RBP18.5■□□□□ 0.55
BRCA1-228ENST00000618469 SYMPKQ92797 1274 aaKnown RBP18.5■□□□□ 0.55
BRCA1-228ENST00000618469 TAAR1Q96RJ0 339 aa18.5■□□□□ 0.55
BRCA1-228ENST00000618469 LZTS2Q9BRK4 669 aa18.5■□□□□ 0.55
BRCA1-228ENST00000618469 MAF1Q9H063 256 aa18.5■□□□□ 0.55
BRCA1-228ENST00000618469 UPF3AQ9H1J1 476 aaKnown RBP18.5■□□□□ 0.55
BRCA1-228ENST00000618469 TTC28Q96AY4 2481 aa18.5■□□□□ 0.55
BRCA1-228ENST00000618469 KLF18A0A0U1RQI7 1052 aa18.49■□□□□ 0.55
BRCA1-228ENST00000618469 A0A1W2PQ45 241 aaPredicted RBP18.49■□□□□ 0.55
BRCA1-228ENST00000618469 A0A1W2PQY0 241 aa18.49■□□□□ 0.55
BRCA1-228ENST00000618469 B4DLN1 442 aa18.49■□□□□ 0.55
BRCA1-228ENST00000618469 ZBTB43O43298 467 aa18.49■□□□□ 0.55
BRCA1-228ENST00000618469 EPB41L2O43491 1005 aaKnown RBP18.49■□□□□ 0.55
BRCA1-228ENST00000618469 PQBP1O60828 265 aaKnown RBP18.49■□□□□ 0.55
BRCA1-228ENST00000618469 SMPD1P17405 629 aa18.49■□□□□ 0.55
BRCA1-228ENST00000618469 PTGS1P23219 599 aa18.49■□□□□ 0.55
BRCA1-228ENST00000618469 HSD17B4P51659 736 aa18.49■□□□□ 0.55
BRCA1-228ENST00000618469 MRPL12P52815 198 aaKnown RBP18.49■□□□□ 0.55
BRCA1-228ENST00000618469 GJA9P57773 515 aa18.49■□□□□ 0.55
BRCA1-228ENST00000618469 FANCBQ8NB91 859 aa18.49■□□□□ 0.55
BRCA1-228ENST00000618469 RMDN3Q96TC7 470 aa18.49■□□□□ 0.55
BRCA1-228ENST00000618469 BRPF3Q9ULD4 1205 aa18.49■□□□□ 0.55
BRCA1-228ENST00000618469 NAP1L2Q9ULW6 460 aaPredicted RBP18.49■□□□□ 0.55
BRCA1-228ENST00000618469 GOLGA8AA7E2F4 631 aa18.48■□□□□ 0.55
BRCA1-228ENST00000618469 GOLGA8BA8MQT2 603 aa18.48■□□□□ 0.55
BRCA1-228ENST00000618469 EIF2AK2P19525 551 aaKnown RBP18.48■□□□□ 0.55
BRCA1-228ENST00000618469 CASTP20810 708 aaKnown RBP18.48■□□□□ 0.55
BRCA1-228ENST00000618469 CST5P28325 142 aaPredicted RBP18.48■□□□□ 0.55
BRCA1-228ENST00000618469 SMARCA1P28370 1054 aa18.48■□□□□ 0.55
BRCA1-228ENST00000618469 HOXA13P31271 388 aaPredicted RBP18.48■□□□□ 0.55
BRCA1-228ENST00000618469 ACLYP53396 1101 aa18.48■□□□□ 0.55
BRCA1-228ENST00000618469 GHRHRQ02643 423 aa18.48■□□□□ 0.55
BRCA1-228ENST00000618469 RTN1Q16799 776 aa18.48■□□□□ 0.55
BRCA1-228ENST00000618469 KLHDC9Q8NEP7 349 aa18.48■□□□□ 0.55
BRCA1-228ENST00000618469 NSUN6Q8TEA1 469 aaKnown RBP18.48■□□□□ 0.55
BRCA1-228ENST00000618469 GNEQ9Y223 722 aaKnown RBP18.48■□□□□ 0.55
BRCA1-228ENST00000618469 CNTNAP5Q8WYK1 1306 aa18.48■□□□□ 0.55
BRCA1-228ENST00000618469 MOXD2PA6NHM9 499 aa18.47■□□□□ 0.55
BRCA1-228ENST00000618469 CLTBP09497 229 aa18.47■□□□□ 0.55
BRCA1-228ENST00000618469 RAG1P15918 1043 aa18.47■□□□□ 0.55
BRCA1-228ENST00000618469 RPS6KB1P23443 525 aa18.47■□□□□ 0.55
BRCA1-228ENST00000618469 BEX3Q00994 111 aa18.47■□□□□ 0.55
BRCA1-228ENST00000618469 TJAP1Q5JTD0 557 aa18.47■□□□□ 0.55
BRCA1-228ENST00000618469 TMEM63BQ5T3F8 832 aa18.47■□□□□ 0.55
BRCA1-228ENST00000618469 ARHGEF16Q5VV41 709 aa18.47■□□□□ 0.55
BRCA1-228ENST00000618469 IQSEC1Q6DN90 963 aa18.47■□□□□ 0.55
BRCA1-228ENST00000618469 Q6ZUG5 572 aa18.47■□□□□ 0.55
BRCA1-228ENST00000618469 CCDC82Q8N4S0 544 aa18.47■□□□□ 0.55
BRCA1-228ENST00000618469 BRF1Q92994 677 aa18.47■□□□□ 0.55
BRCA1-228ENST00000618469 TSEN34Q9BSV6 310 aaKnown RBP18.47■□□□□ 0.55
BRCA1-228ENST00000618469 AP5M1Q9H0R1 490 aa18.47■□□□□ 0.55
BRCA1-228ENST00000618469 PXMP2Q9NR77 195 aa18.47■□□□□ 0.55
BRCA1-228ENST00000618469 RBM28Q9NW13 759 aaKnown RBP18.47■□□□□ 0.55
BRCA1-228ENST00000618469 KIAA1217Q5T5P2 1943 aa18.47■□□□□ 0.55
BRCA1-228ENST00000618469 hCG_1642624A0A1W2PR95 340 aa18.46■□□□□ 0.55
BRCA1-228ENST00000618469 GCOM1H8Y6P7 765 aaPredicted RBP18.46■□□□□ 0.55
BRCA1-228ENST00000618469 TNFRSF10AO00220 468 aa18.46■□□□□ 0.55
BRCA1-228ENST00000618469 POLR2MP0CAP2 368 aa18.46■□□□□ 0.55
BRCA1-228ENST00000618469 DNAJB2P25686 324 aa18.46■□□□□ 0.55
BRCA1-228ENST00000618469 PSMA5P28066 241 aa18.46■□□□□ 0.55
BRCA1-228ENST00000618469 APOBRQ0VD83 1088 aa18.46■□□□□ 0.55
BRCA1-228ENST00000618469 PPP2R5BQ15173 497 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms