RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 BTNL10A8MVZ5 291 aa8.83□□□□□ -1
CHD7-212ENST00000618450 PRDX5P30044 214 aa8.83□□□□□ -1
CHD7-212ENST00000618450 STAT6P42226 847 aa8.83□□□□□ -1
CHD7-212ENST00000618450 PPFIA1Q13136 1202 aa8.83□□□□□ -1
CHD7-212ENST00000618450 TRADDQ15628 312 aa8.83□□□□□ -1
CHD7-212ENST00000618450 GRIK5Q16478 980 aa8.83□□□□□ -1
CHD7-212ENST00000618450 TMEM119Q4V9L6 283 aa8.83□□□□□ -1
CHD7-212ENST00000618450 VWA3BQ502W6 1294 aa8.83□□□□□ -1
CHD7-212ENST00000618450 TRIM58Q8NG06 486 aa8.83□□□□□ -1
CHD7-212ENST00000618450 ZIM3Q96PE6 472 aa8.83□□□□□ -1
CHD7-212ENST00000618450 SRRM3A6NNA2 597 aaPredicted RBP8.83□□□□□ -1
CHD7-212ENST00000618450 KIF11P52732 1056 aa8.83□□□□□ -1
CHD7-212ENST00000618450 IQCA1Q86XH1 822 aa8.83□□□□□ -1
CHD7-212ENST00000618450 EHBP1Q8NDI1 1231 aa8.83□□□□□ -1
CHD7-212ENST00000618450 SYN2Q92777 582 aaPredicted RBP8.83□□□□□ -1
CHD7-212ENST00000618450 CELF1Q92879 486 aaKnown RBP8.83□□□□□ -1
CHD7-212ENST00000618450 GDAP1L1Q96MZ0 367 aa8.83□□□□□ -1
CHD7-212ENST00000618450 SPZ1Q9BXG8 430 aa8.83□□□□□ -1
CHD7-212ENST00000618450 CCDC87Q9NVE4 849 aa8.83□□□□□ -1
CHD7-212ENST00000618450 A0A087WUV0 522 aaPredicted RBP8.83□□□□□ -1
CHD7-212ENST00000618450 SSU72P8A0A1W2PR75 194 aa8.83□□□□□ -1
CHD7-212ENST00000618450 MYMKA6NI61 221 aa8.83□□□□□ -1
CHD7-212ENST00000618450 CALML3P27482 149 aa8.83□□□□□ -1
CHD7-212ENST00000618450 CKAP4Q07065 602 aaKnown RBP8.83□□□□□ -1
CHD7-212ENST00000618450 MEI1Q5TIA1 1274 aa8.83□□□□□ -1
CHD7-212ENST00000618450 ALS2CLQ60I27 953 aa8.83□□□□□ -1
CHD7-212ENST00000618450 EMBQ6PCB8 327 aa8.83□□□□□ -1
CHD7-212ENST00000618450 KDM7AQ6ZMT4 941 aa8.83□□□□□ -1
CHD7-212ENST00000618450 KCNK18Q7Z418 384 aa8.83□□□□□ -1
CHD7-212ENST00000618450 EIF1ADQ8N9N8 165 aaKnown RBP8.83□□□□□ -1
CHD7-212ENST00000618450 IQCDQ96DY2 449 aa8.83□□□□□ -1
CHD7-212ENST00000618450 FGFBP2Q9BYJ0 223 aa8.83□□□□□ -1
CHD7-212ENST00000618450 STIM2Q9P246 746 aa8.83□□□□□ -1
CHD7-212ENST00000618450 ARPP21Q9UBL0 812 aaPredicted RBP8.83□□□□□ -1
CHD7-212ENST00000618450 PLIN4Q96Q06 1357 aa8.83□□□□□ -1
CHD7-212ENST00000618450 ATP8B3O60423 1300 aa8.82□□□□□ -1
CHD7-212ENST00000618450 MOCS3O95396 460 aa8.82□□□□□ -1
CHD7-212ENST00000618450 FXR2P51116 673 aaKnown RBP eCLIP8.82□□□□□ -12e-7■■■□□ 17.6
CHD7-212ENST00000618450 ITGB3BPQ13352 177 aaPredicted RBP8.82□□□□□ -1
CHD7-212ENST00000618450 UAP1Q16222 522 aaPredicted RBP8.82□□□□□ -1
CHD7-212ENST00000618450 HYIQ5T013 277 aa8.82□□□□□ -1
CHD7-212ENST00000618450 LEKR1Q6ZMV7 388 aa8.82□□□□□ -1
CHD7-212ENST00000618450 CSGALNACT2Q8N6G5 542 aa8.82□□□□□ -1
CHD7-212ENST00000618450 PPM1EQ8WY54 764 aa8.82□□□□□ -1
CHD7-212ENST00000618450 CCDC102AQ96A19 550 aa8.82□□□□□ -1
CHD7-212ENST00000618450 EEF2KMTQ96G04 330 aa8.82□□□□□ -1
CHD7-212ENST00000618450 CAPZA3Q96KX2 299 aa8.82□□□□□ -1
CHD7-212ENST00000618450 TXLNGYQ9BZA5 131 aa8.82□□□□□ -1
CHD7-212ENST00000618450 EDEM3Q9BZQ6 932 aa8.82□□□□□ -1
CHD7-212ENST00000618450 LRRC4CQ9HCJ2 640 aa8.82□□□□□ -1
CHD7-212ENST00000618450 SLC12A6Q9UHW9 1150 aa8.82□□□□□ -1
CHD7-212ENST00000618450 ZSCAN5CA6NGD5 496 aaPredicted RBP8.82□□□□□ -1
CHD7-212ENST00000618450 FSBPO95073 299 aa8.82□□□□□ -1
CHD7-212ENST00000618450 SMARCA1P28370 1054 aa8.82□□□□□ -1
CHD7-212ENST00000618450 POU5F1Q01860 360 aaKnown RBP8.82□□□□□ -1
CHD7-212ENST00000618450 INF2Q27J81 1249 aa8.82□□□□□ -1
CHD7-212ENST00000618450 ERFEQ4G0M1 354 aa8.82□□□□□ -1
CHD7-212ENST00000618450 GLE1Q53GS7 698 aaKnown RBP8.82□□□□□ -1
CHD7-212ENST00000618450 CLEC4GQ6UXB4 293 aa8.82□□□□□ -1
CHD7-212ENST00000618450 DTHD1Q6ZMT9 781 aa8.82□□□□□ -1
CHD7-212ENST00000618450 LRRC57Q8N9N7 239 aa8.82□□□□□ -1
CHD7-212ENST00000618450 SECISBP2LQ93073 1101 aaKnown RBP8.82□□□□□ -1
CHD7-212ENST00000618450 NUDT12Q9BQG2 462 aa8.82□□□□□ -1
CHD7-212ENST00000618450 GGA2Q9UJY4 613 aa8.82□□□□□ -1
CHD7-212ENST00000618450 BTAF1O14981 1849 aa8.82□□□□□ -1
CHD7-212ENST00000618450 FRMD3A2A2Y4 597 aa8.82□□□□□ -1
CHD7-212ENST00000618450 CES2O00748 559 aa8.82□□□□□ -1
CHD7-212ENST00000618450 NLRP5P59047 1200 aa8.82□□□□□ -1
CHD7-212ENST00000618450 ORC2Q13416 577 aaPredicted RBP8.82□□□□□ -1
CHD7-212ENST00000618450 PDXDC1Q6P996 788 aa8.82□□□□□ -1
CHD7-212ENST00000618450 GBP6Q6ZN66 633 aa8.82□□□□□ -1
CHD7-212ENST00000618450 RNF10Q8N5U6 811 aaKnown RBP8.82□□□□□ -1
CHD7-212ENST00000618450 TSGA10Q9BZW7 698 aa8.82□□□□□ -1
CHD7-212ENST00000618450 NDST4Q9H3R1 872 aa8.82□□□□□ -1
CHD7-212ENST00000618450 NRXN2Q9P2S2 1712 aa8.82□□□□□ -1
CHD7-212ENST00000618450 LRRC53A6NM62 1247 aa8.81□□□□□ -1
CHD7-212ENST00000618450 USP17L8P0C7I0 530 aa8.81□□□□□ -1
CHD7-212ENST00000618450 IDEP14735 1019 aa8.81□□□□□ -1
CHD7-212ENST00000618450 RASA1P20936 1047 aa8.81□□□□□ -1
CHD7-212ENST00000618450 EIF4A3P38919 411 aaKnown RBP8.81□□□□□ -1
CHD7-212ENST00000618450 EPHB4P54760 987 aa8.81□□□□□ -1
CHD7-212ENST00000618450 PPP4CP60510 307 aa8.81□□□□□ -1
CHD7-212ENST00000618450 DDR1Q08345 913 aa8.81□□□□□ -1
CHD7-212ENST00000618450 DNAJC21Q5F1R6 531 aaKnown RBP8.81□□□□□ -1
CHD7-212ENST00000618450 CCDC155Q8N6L0 562 aa8.81□□□□□ -1
CHD7-212ENST00000618450 PNMA1Q8ND90 353 aa8.81□□□□□ -1
CHD7-212ENST00000618450 SCFD2Q8WU76 684 aa8.81□□□□□ -1
CHD7-212ENST00000618450 BRMS1Q9HCU9 246 aa8.81□□□□□ -1
CHD7-212ENST00000618450 ZNF330Q9Y3S2 320 aaPredicted RBP8.81□□□□□ -1
CHD7-212ENST00000618450 FAM169AQ9Y6X4 670 aa8.81□□□□□ -1
CHD7-212ENST00000618450 PVALEFA0A1B0GWK0 134 aa8.81□□□□□ -1
CHD7-212ENST00000618450 GOLGA6BA6NDN3 693 aa8.81□□□□□ -1
CHD7-212ENST00000618450 GOLGA8KD6RF30 607 aa8.81□□□□□ -1
CHD7-212ENST00000618450 NCK2O43639 380 aa8.81□□□□□ -1
CHD7-212ENST00000618450 SNHG28P0DPA3 235 aa8.81□□□□□ -1
CHD7-212ENST00000618450 CYLC1P35663 651 aaPredicted RBP8.81□□□□□ -1
CHD7-212ENST00000618450 CARSP49589 748 aaKnown RBP8.81□□□□□ -1
CHD7-212ENST00000618450 SLC7A5Q01650 507 aa8.81□□□□□ -1
CHD7-212ENST00000618450 TBC1D8BQ0IIM8 1120 aa8.81□□□□□ -1
CHD7-212ENST00000618450 SPRED3Q2MJR0 410 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms