RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 PBKQ96KB5 322 aa16.25■□□□□ 0.19
COL5A1-208ENST00000618395 STK24Q9Y6E0 443 aa16.25■□□□□ 0.19
COL5A1-208ENST00000618395 RASSF9O75901 435 aa16.25■□□□□ 0.19
COL5A1-208ENST00000618395 VCPP55072 806 aaKnown RBP16.25■□□□□ 0.19
COL5A1-208ENST00000618395 PROCA1Q8NCQ7 364 aaPredicted RBP16.25■□□□□ 0.19
COL5A1-208ENST00000618395 U2AF1L4Q8WU68 220 aaKnown RBP16.25■□□□□ 0.19
COL5A1-208ENST00000618395 NLRC4Q9NPP4 1024 aa16.25■□□□□ 0.19
COL5A1-208ENST00000618395 BIN2Q9UBW5 565 aaPredicted RBP16.25■□□□□ 0.19
COL5A1-208ENST00000618395 YWHAGP61981 247 aaKnown RBP eCLIP16.25■□□□□ 0.19
COL5A1-208ENST00000618395 SRRM1Q8IYB3 904 aaKnown RBP16.25■□□□□ 0.19
COL5A1-208ENST00000618395 KLHL31Q9H511 634 aa16.25■□□□□ 0.19
COL5A1-208ENST00000618395 COG4Q9H9E3 785 aa16.25■□□□□ 0.19
COL5A1-208ENST00000618395 ZNF483Q8TF39 744 aaPredicted RBP16.25■□□□□ 0.19
COL5A1-208ENST00000618395 XRCC5P13010 732 aaKnown RBP16.25■□□□□ 0.19
COL5A1-208ENST00000618395 PLTPP55058 493 aa16.25■□□□□ 0.19
COL5A1-208ENST00000618395 TBL3Q12788 808 aaKnown RBP16.25■□□□□ 0.19
COL5A1-208ENST00000618395 KIAA0825Q8IV33 1275 aa16.25■□□□□ 0.19
COL5A1-208ENST00000618395 PPARGC1AQ9UBK2 798 aaKnown RBP16.25■□□□□ 0.19
COL5A1-208ENST00000618395 CCPG1Q9ULG6 757 aa16.25■□□□□ 0.19
COL5A1-208ENST00000618395 HAUS3Q68CZ6 603 aa16.24■□□□□ 0.19
COL5A1-208ENST00000618395 QKIQ96PU8 341 aaKnown RBP eCLIP16.24■□□□□ 0.19
COL5A1-208ENST00000618395 TEX12Q9BXU0 123 aa16.24■□□□□ 0.19
COL5A1-208ENST00000618395 DLGAP2Q9P1A6 1054 aa16.24■□□□□ 0.19
COL5A1-208ENST00000618395 NRBP1Q9UHY1 535 aa16.24■□□□□ 0.19
COL5A1-208ENST00000618395 PLAAQ9Y263 795 aa16.24■□□□□ 0.19
COL5A1-208ENST00000618395 NCAPD3P42695 1498 aa16.24■□□□□ 0.19
COL5A1-208ENST00000618395 EIF2B2P49770 351 aaKnown RBP16.24■□□□□ 0.19
COL5A1-208ENST00000618395 ADALQ6DHV7 355 aa16.24■□□□□ 0.19
COL5A1-208ENST00000618395 C6orf203Q9P0P8 240 aaPredicted RBP16.24■□□□□ 0.19
COL5A1-208ENST00000618395 DBF4Q9UBU7 674 aaPredicted RBP16.24■□□□□ 0.19
COL5A1-208ENST00000618395 SLCO1A2P46721 670 aa16.24■□□□□ 0.19
COL5A1-208ENST00000618395 CC2D1AQ6P1N0 951 aaPredicted RBP16.24■□□□□ 0.19
COL5A1-208ENST00000618395 FAM161BQ96MY7 647 aa16.24■□□□□ 0.19
COL5A1-208ENST00000618395 THUMPD2Q9BTF0 503 aaKnown RBP16.24■□□□□ 0.19
COL5A1-208ENST00000618395 APOBEC2Q9Y235 224 aaKnown RBP16.24■□□□□ 0.19
COL5A1-208ENST00000618395 SFSWAPQ12872 951 aaKnown RBP16.24■□□□□ 0.19
COL5A1-208ENST00000618395 CDC37L1Q7L3B6 337 aa16.24■□□□□ 0.19
COL5A1-208ENST00000618395 TEKT4Q8WW24 435 aa16.24■□□□□ 0.19
COL5A1-208ENST00000618395 IPO5O00410 1097 aaKnown RBP16.24■□□□□ 0.19
COL5A1-208ENST00000618395 PLEKHM2Q8IWE5 1019 aa16.24■□□□□ 0.19
COL5A1-208ENST00000618395 MT-ND3P03897 115 aa16.24■□□□□ 0.19
COL5A1-208ENST00000618395 CHMLP26374 656 aa16.24■□□□□ 0.19
COL5A1-208ENST00000618395 PLEKHM3Q6ZWE6 761 aa16.24■□□□□ 0.19
COL5A1-208ENST00000618395 PPP1R14BQ96C90 147 aa16.24■□□□□ 0.19
COL5A1-208ENST00000618395 WDR91A4D1P6 747 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 ADCY1Q08828 1119 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 OCRLQ01968 901 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 PRKG1Q13976 671 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 CYTH1Q15438 398 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 CCDC144BQ3MJ40 725 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 PARP3Q9Y6F1 533 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 SGK1O00141 431 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 KRT6AP02538 564 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 KRT6BP04259 564 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 MLH1P40692 756 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 KRT6CP48668 564 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 PYGMP11217 842 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 PPP2R2AP63151 447 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 SLC7A5Q01650 507 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 KMT5BQ4FZB7 885 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 SMAPO00193 183 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 ABCD1P33897 745 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 KPNA2P52292 529 aaKnown RBP16.23■□□□□ 0.19
COL5A1-208ENST00000618395 TJAP1Q5JTD0 557 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 LONP2Q86WA8 852 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 FAM96AQ9H5X1 160 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 ZNF277Q9NRM2 450 aaPredicted RBP16.23■□□□□ 0.19
COL5A1-208ENST00000618395 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.23■□□□□ 0.19
COL5A1-208ENST00000618395 DEXIO95424 95 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 PARP1P09874 1014 aaKnown RBP16.23■□□□□ 0.19
COL5A1-208ENST00000618395 CA4P22748 312 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 EPN3Q9H201 632 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 EXOC7Q9UPT5 735 aa16.23■□□□□ 0.19
COL5A1-208ENST00000618395 H7C1D1 291 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 DLGAP3O95886 979 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 EPM2AIP1Q7L775 607 aaPredicted RBP16.22■□□□□ 0.19
COL5A1-208ENST00000618395 CATSPER2Q96P56 530 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 IL1RAPL1Q9NZN1 696 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 RTEL1-TNFRSF6BF6WH68 1400 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 GRAMD1AQ96CP6 724 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 NT5C3AQ9H0P0 336 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 TMEM245Q9H330 911 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 RASSF7Q02833 373 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 BFSP1Q12934 665 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 NR1H3Q13133 447 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 ITGB3BPQ13352 177 aaPredicted RBP16.22■□□□□ 0.19
COL5A1-208ENST00000618395 DNAJC9Q8WXX5 260 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 RUSC2Q8N2Y8 1516 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 RSPH10B2B2RC85 870 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 RSPH10BP0C881 870 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 SLC26A7Q8TE54 656 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 GAS2L3Q86XJ1 694 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 SYTL2Q9HCH5 934 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 CCDC87Q9NVE4 849 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 MAP3K2Q9Y2U5 619 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 IQANK1A0A1B0GTG1 560 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 GOLGA8CPA6NN73 597 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 NOP56O00567 594 aaKnown RBP16.22■□□□□ 0.19
COL5A1-208ENST00000618395 ORC4O43929 436 aa16.22■□□□□ 0.19
COL5A1-208ENST00000618395 PLS1Q14651 629 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms