RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 FAM177A1Q8N128 213 aaPredicted RBP23.29■■□□□ 1.32
SDHA-220ENST00000617470 CCDC148Q8NFR7 591 aa23.29■■□□□ 1.32
SDHA-220ENST00000617470 HOMER2Q9NSB8 354 aa23.29■■□□□ 1.32
SDHA-220ENST00000617470 USP25Q9UHP3 1055 aa23.29■■□□□ 1.32
SDHA-220ENST00000617470 CPA4Q9UI42 421 aa23.29■■□□□ 1.32
SDHA-220ENST00000617470 KCNH3Q9ULD8 1083 aa23.29■■□□□ 1.32
SDHA-220ENST00000617470 PCDHA6Q9UN73 950 aa23.29■■□□□ 1.32
SDHA-220ENST00000617470 PCDHA8Q9Y5H6 950 aa23.29■■□□□ 1.32
SDHA-220ENST00000617470 ALAS1P13196 640 aa23.28■■□□□ 1.32
SDHA-220ENST00000617470 STAT3P40763 770 aa23.28■■□□□ 1.32
SDHA-220ENST00000617470 TRAPPC10P48553 1259 aa23.28■■□□□ 1.32
SDHA-220ENST00000617470 GALNT17Q6IS24 598 aa23.28■■□□□ 1.32
SDHA-220ENST00000617470 LUZP1Q86V48 1076 aa23.28■■□□□ 1.32
SDHA-220ENST00000617470 TEX13BQ9BXU2 312 aa23.28■■□□□ 1.32
SDHA-220ENST00000617470 ZMYND12Q9H0C1 365 aa23.28■■□□□ 1.32
SDHA-220ENST00000617470 KIAA1468Q9P260 1216 aa23.28■■□□□ 1.32
SDHA-220ENST00000617470 ZNF214Q9UL59 606 aaPredicted RBP23.28■■□□□ 1.32
SDHA-220ENST00000617470 CNMDO75829 334 aa23.27■■□□□ 1.32
SDHA-220ENST00000617470 NAPAP54920 295 aa23.27■■□□□ 1.32
SDHA-220ENST00000617470 C11orf57Q6ZUT1 292 aaPredicted RBP23.27■■□□□ 1.32
SDHA-220ENST00000617470 USP49Q70CQ1 688 aa23.27■■□□□ 1.32
SDHA-220ENST00000617470 CSRNP2Q9H175 543 aa23.27■■□□□ 1.32
SDHA-220ENST00000617470 COL11A1P12107 1806 aaPredicted RBP23.27■■□□□ 1.32
SDHA-220ENST00000617470 CA12O43570 354 aa23.27■■□□□ 1.32
SDHA-220ENST00000617470 TRPA1O75762 1119 aa23.27■■□□□ 1.32
SDHA-220ENST00000617470 OAZ1P54368 228 aa23.27■■□□□ 1.32
SDHA-220ENST00000617470 LONRF3Q496Y0 759 aa23.27■■□□□ 1.32
SDHA-220ENST00000617470 SPATC1LQ9H0A9 340 aa23.27■■□□□ 1.32
SDHA-220ENST00000617470 ERVK-9P63128 1117 aa23.26■■□□□ 1.31
SDHA-220ENST00000617470 ERVK-24P63145 666 aa23.26■■□□□ 1.31
SDHA-220ENST00000617470 ATP2C1P98194 919 aaPredicted RBP23.26■■□□□ 1.31
SDHA-220ENST00000617470 STX1AQ16623 288 aa23.26■■□□□ 1.31
SDHA-220ENST00000617470 Q3C1V9 767 aa23.26■■□□□ 1.31
SDHA-220ENST00000617470 GPRC5AQ8NFJ5 357 aa23.26■■□□□ 1.31
SDHA-220ENST00000617470 TLR2O60603 784 aa23.25■■□□□ 1.31
SDHA-220ENST00000617470 BMP15O95972 392 aa23.25■■□□□ 1.31
SDHA-220ENST00000617470 ZNF165P49910 485 aa23.25■■□□□ 1.31
SDHA-220ENST00000617470 TRAF1Q13077 416 aa23.25■■□□□ 1.31
SDHA-220ENST00000617470 PTGDRQ13258 359 aa23.25■■□□□ 1.31
SDHA-220ENST00000617470 RIPK3Q9Y572 518 aa23.25■■□□□ 1.31
SDHA-220ENST00000617470 hCG_1984214I3L0E3 225 aa23.25■■□□□ 1.31
SDHA-220ENST00000617470 ATP2A1O14983 1001 aa23.25■■□□□ 1.31
SDHA-220ENST00000617470 TBC1D8O95759 1140 aa23.25■■□□□ 1.31
SDHA-220ENST00000617470 NCAPG2Q86XI2 1143 aa23.25■■□□□ 1.31
SDHA-220ENST00000617470 ZNF713Q8N859 430 aaPredicted RBP23.25■■□□□ 1.31
SDHA-220ENST00000617470 TRERF1Q96PN7 1200 aa23.25■■□□□ 1.31
SDHA-220ENST00000617470 PNMA2Q9UL42 364 aa23.25■■□□□ 1.31
SDHA-220ENST00000617470 WDR78Q5VTH9 848 aa23.24■■□□□ 1.31
SDHA-220ENST00000617470 KRBA2Q6ZNG9 492 aa23.24■■□□□ 1.31
SDHA-220ENST00000617470 C4orf32Q8N8J7 132 aa23.24■■□□□ 1.31
SDHA-220ENST00000617470 CCDC12Q8WUD4 166 aaPredicted RBP23.24■■□□□ 1.31
SDHA-220ENST00000617470 MOV10L1Q9BXT6 1211 aaKnown RBP23.24■■□□□ 1.31
SDHA-220ENST00000617470 RNF186Q9NXI6 227 aa23.24■■□□□ 1.31
SDHA-220ENST00000617470 A0A0G2JMZ2 1700 aa23.24■■□□□ 1.31
SDHA-220ENST00000617470 ECM2O94769 699 aaPredicted RBP23.23■■□□□ 1.31
SDHA-220ENST00000617470 IQCB1Q15051 598 aa23.23■■□□□ 1.31
SDHA-220ENST00000617470 FERMT2Q96AC1 680 aa23.23■■□□□ 1.31
SDHA-220ENST00000617470 RNF146Q9NTX7 359 aa23.23■■□□□ 1.31
SDHA-220ENST00000617470 MRPL11Q9Y3B7 192 aaKnown RBP23.23■■□□□ 1.31
SDHA-220ENST00000617470 ABCB11O95342 1321 aa23.23■■□□□ 1.31
SDHA-220ENST00000617470 SMCO2A6NFE2 343 aa23.23■■□□□ 1.31
SDHA-220ENST00000617470 CAVIN2O95810 425 aa23.23■■□□□ 1.31
SDHA-220ENST00000617470 MCM7P33993 719 aa23.23■■□□□ 1.31
SDHA-220ENST00000617470 CCNA1P78396 465 aa23.23■■□□□ 1.31
SDHA-220ENST00000617470 IL17AQ16552 155 aa23.23■■□□□ 1.31
SDHA-220ENST00000617470 FAM110CQ1W6H9 321 aa23.23■■□□□ 1.31
SDHA-220ENST00000617470 RIOX2Q8IUF8 465 aa23.23■■□□□ 1.31
SDHA-220ENST00000617470 R3HDMLQ9H3Y0 253 aa23.23■■□□□ 1.31
SDHA-220ENST00000617470 FAM13BQ9NYF5 915 aa23.23■■□□□ 1.31
SDHA-220ENST00000617470 MORF4L1Q9UBU8 362 aa23.23■■□□□ 1.31
SDHA-220ENST00000617470 ADGRA2Q96PE1 1338 aa23.23■■□□□ 1.31
SDHA-220ENST00000617470 PCNTO95613 3336 aa23.23■■□□□ 1.31
SDHA-220ENST00000617470 ADCY5O95622 1261 aa23.22■■□□□ 1.31
SDHA-220ENST00000617470 MDM2Q00987 491 aaPredicted RBP23.22■■□□□ 1.31
SDHA-220ENST00000617470 ANO10Q9NW15 660 aa23.22■■□□□ 1.31
SDHA-220ENST00000617470 CCDC194A0A1B0GVG4 234 aa23.21■■□□□ 1.31
SDHA-220ENST00000617470 ESYT2A0FGR8 921 aa23.21■■□□□ 1.31
SDHA-220ENST00000617470 ERCC3P19447 782 aa23.21■■□□□ 1.31
SDHA-220ENST00000617470 MUM1L1Q5H9M0 696 aa23.21■■□□□ 1.31
SDHA-220ENST00000617470 C17orf99Q6UX52 265 aa23.21■■□□□ 1.31
SDHA-220ENST00000617470 EPSTI1Q96J88 318 aa23.21■■□□□ 1.31
SDHA-220ENST00000617470 BEGAINQ9BUH8 593 aa23.21■■□□□ 1.31
SDHA-220ENST00000617470 TUBE1Q9UJT0 475 aa23.21■■□□□ 1.31
SDHA-220ENST00000617470 THSD7BQ9C0I4 1608 aa23.21■■□□□ 1.31
SDHA-220ENST00000617470 A0A087X0B3 334 aa23.21■■□□□ 1.31
SDHA-220ENST00000617470 FOXN1O15353 648 aa23.21■■□□□ 1.31
SDHA-220ENST00000617470 POLR2DO15514 142 aaKnown RBP23.21■■□□□ 1.31
SDHA-220ENST00000617470 BCRP11274 1271 aa23.21■■□□□ 1.31
SDHA-220ENST00000617470 MAP2K1Q02750 393 aaPredicted RBP23.21■■□□□ 1.31
SDHA-220ENST00000617470 PNOCQ13519 176 aa23.21■■□□□ 1.31
SDHA-220ENST00000617470 INF2Q27J81 1249 aa23.21■■□□□ 1.31
SDHA-220ENST00000617470 PPP1R18Q6NYC8 613 aa23.21■■□□□ 1.31
SDHA-220ENST00000617470 DNAJC5GQ8N7S2 189 aa23.21■■□□□ 1.31
SDHA-220ENST00000617470 TRIM44Q96DX7 344 aaPredicted RBP23.21■■□□□ 1.31
SDHA-220ENST00000617470 C6orf50Q9HD87 102 aa23.21■■□□□ 1.31
SDHA-220ENST00000617470 CEP350Q5VT06 3117 aa23.21■■□□□ 1.31
SDHA-220ENST00000617470 SMCHD1A6NHR9 2005 aa23.21■■□□□ 1.31
SDHA-220ENST00000617470 NFIBO00712 420 aa23.2■■□□□ 1.3
SDHA-220ENST00000617470 SLC25A27O95847 323 aa23.2■■□□□ 1.3
SDHA-220ENST00000617470 TKFCQ3LXA3 575 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms