RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 KLHDC7AQ5VTJ3 777 aa17.26■□□□□ 0.35
GPN1-212ENST00000616939 PDXDC1Q6P996 788 aa17.26■□□□□ 0.35
GPN1-212ENST00000616939 RASSF8Q8NHQ8 419 aa17.26■□□□□ 0.35
GPN1-212ENST00000616939 PIGBQ92521 554 aa17.26■□□□□ 0.35
GPN1-212ENST00000616939 DDX17Q92841 729 aaKnown RBP17.26■□□□□ 0.35
GPN1-212ENST00000616939 RBM12Q9NTZ6 932 aaKnown RBP17.26■□□□□ 0.35
GPN1-212ENST00000616939 ASAP1Q9ULH1 1129 aa17.26■□□□□ 0.35
GPN1-212ENST00000616939 SAMM50Q9Y512 469 aa17.26■□□□□ 0.35
GPN1-212ENST00000616939 AKR1B10O60218 316 aa17.25■□□□□ 0.35
GPN1-212ENST00000616939 PLEKP08567 350 aaPredicted RBP17.25■□□□□ 0.35
GPN1-212ENST00000616939 NR1D1P20393 614 aa17.25■□□□□ 0.35
GPN1-212ENST00000616939 IGHMBP2P38935 993 aaKnown RBP17.25■□□□□ 0.35
GPN1-212ENST00000616939 IL6STP40189 918 aaPredicted RBP17.25■□□□□ 0.35
GPN1-212ENST00000616939 AMPD3Q01432 767 aa17.25■□□□□ 0.35
GPN1-212ENST00000616939 SLC7A5Q01650 507 aa17.25■□□□□ 0.35
GPN1-212ENST00000616939 ORC2Q13416 577 aaPredicted RBP17.25■□□□□ 0.35
GPN1-212ENST00000616939 TYW1BQ6NUM6 668 aa17.25■□□□□ 0.35
GPN1-212ENST00000616939 C2CD5Q86YS7 1000 aa17.25■□□□□ 0.35
GPN1-212ENST00000616939 ARFGAP2Q8N6H7 521 aa17.25■□□□□ 0.35
GPN1-212ENST00000616939 ZNF473Q8WTR7 871 aaKnown RBP17.25■□□□□ 0.35
GPN1-212ENST00000616939 SYN2Q92777 582 aaPredicted RBP17.25■□□□□ 0.35
GPN1-212ENST00000616939 ATP6V1G3Q96LB4 118 aa17.25■□□□□ 0.35
GPN1-212ENST00000616939 CCDC43Q96MW1 224 aaKnown RBP17.25■□□□□ 0.35
GPN1-212ENST00000616939 NUCKS1Q9H1E3 243 aaKnown RBP17.25■□□□□ 0.35
GPN1-212ENST00000616939 TMEM60Q9H2L4 133 aa17.25■□□□□ 0.35
GPN1-212ENST00000616939 VCPKMTQ9H867 229 aa17.25■□□□□ 0.35
GPN1-212ENST00000616939 BAZ2BQ9UIF8 2168 aaKnown RBP17.25■□□□□ 0.35
GPN1-212ENST00000616939 ZNF233A6NK53 670 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 CES2O00748 559 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 ADAMTS3O15072 1205 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 MAP2K2P36507 400 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 HSPA9P38646 679 aaKnown RBP17.24■□□□□ 0.35
GPN1-212ENST00000616939 GNAQP50148 359 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 MMP14P50281 582 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 CCDC152Q4G0S7 254 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 SBK1Q52WX2 424 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 CABP7Q86V35 215 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 LRRC15Q8TF66 581 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 PIK3R5Q8WYR1 880 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 BAP1Q92560 729 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 ANKS1AQ92625 1134 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 RNPC3Q96LT9 517 aaKnown RBP17.24■□□□□ 0.35
GPN1-212ENST00000616939 PRDM11Q9NQV5 511 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 SMIM22K7EJ46 135 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 MYBP10242 640 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 PLCG1P19174 1290 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 ATP6V1AP38606 617 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 MDH1P40925 334 aaKnown RBP17.24■□□□□ 0.35
GPN1-212ENST00000616939 SMTNP53814 917 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 ACTN3Q08043 901 aaPredicted RBP17.24■□□□□ 0.35
GPN1-212ENST00000616939 NDST4Q9H3R1 872 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 CXorf56Q9H5V9 222 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 ACTR5Q9H9F9 607 aaPredicted RBP17.24■□□□□ 0.35
GPN1-212ENST00000616939 LUC7LQ9NQ29 371 aaKnown RBP17.24■□□□□ 0.35
GPN1-212ENST00000616939 PCDHA6Q9UN73 950 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 PCDHA8Q9Y5H6 950 aa17.24■□□□□ 0.35
GPN1-212ENST00000616939 PP2D1A8MPX8 630 aa17.23■□□□□ 0.35
GPN1-212ENST00000616939 HEXIM1O94992 359 aaKnown RBP17.23■□□□□ 0.35
GPN1-212ENST00000616939 FAM107AO95990 144 aa17.23■□□□□ 0.35
GPN1-212ENST00000616939 ASIC1P78348 528 aa17.23■□□□□ 0.35
GPN1-212ENST00000616939 STK4Q13043 487 aa17.23■□□□□ 0.35
GPN1-212ENST00000616939 GRM4Q14833 912 aa17.23■□□□□ 0.35
GPN1-212ENST00000616939 SKIDA1Q1XH10 827 aa17.23■□□□□ 0.35
GPN1-212ENST00000616939 C6orf89Q6UWU4 347 aa17.23■□□□□ 0.35
GPN1-212ENST00000616939 NLRP14Q86W24 1093 aa17.23■□□□□ 0.35
GPN1-212ENST00000616939 MYCBPAPQ8TBZ2 947 aa17.23■□□□□ 0.35
GPN1-212ENST00000616939 PLCB1Q9NQ66 1216 aa17.23■□□□□ 0.35
GPN1-212ENST00000616939 TCP11L1Q9NUJ3 509 aa17.23■□□□□ 0.35
GPN1-212ENST00000616939 CYP2D7A0A087X1C5 515 aa17.22■□□□□ 0.35
GPN1-212ENST00000616939 LOC102724159A0A0B4J2E5 919 aa17.22■□□□□ 0.35
GPN1-212ENST00000616939 SNAP23O00161 211 aa17.22■□□□□ 0.35
GPN1-212ENST00000616939 BCL9O00512 1426 aa17.22■□□□□ 0.35
GPN1-212ENST00000616939 CHUKO15111 745 aa17.22■□□□□ 0.35
GPN1-212ENST00000616939 PWP2Q15269 919 aaKnown RBP17.22■□□□□ 0.35
GPN1-212ENST00000616939 CCDC178Q5BJE1 867 aa17.22■□□□□ 0.35
GPN1-212ENST00000616939 DZIP3Q86Y13 1208 aaKnown RBP17.22■□□□□ 0.35
GPN1-212ENST00000616939 SH2D3CQ8N5H7 860 aa17.22■□□□□ 0.35
GPN1-212ENST00000616939 SEMA6BQ9H3T3 888 aa17.22■□□□□ 0.35
GPN1-212ENST00000616939 ZBTB1Q9Y2K1 713 aa17.22■□□□□ 0.35
GPN1-212ENST00000616939 PVALEFA0A1B0GWK0 134 aa17.21■□□□□ 0.35
GPN1-212ENST00000616939 LRRC53A6NM62 1247 aa17.21■□□□□ 0.35
GPN1-212ENST00000616939 BHMG1C9JSJ3 638 aaPredicted RBP17.21■□□□□ 0.35
GPN1-212ENST00000616939 H0YHG0 523 aa17.21■□□□□ 0.35
GPN1-212ENST00000616939 C21orf2O43822 256 aa17.21■□□□□ 0.35
GPN1-212ENST00000616939 GLI1P08151 1106 aa17.21■□□□□ 0.35
GPN1-212ENST00000616939 MATR3P43243 847 aaKnown RBP eCLIP17.21■□□□□ 0.35
GPN1-212ENST00000616939 CARSP49589 748 aaKnown RBP17.21■□□□□ 0.35
GPN1-212ENST00000616939 DYNLL1P63167 89 aaKnown RBP17.21■□□□□ 0.35
GPN1-212ENST00000616939 LRRC63Q05C16 580 aa17.21■□□□□ 0.35
GPN1-212ENST00000616939 CHRNDQ07001 517 aa17.21■□□□□ 0.35
GPN1-212ENST00000616939 RCSD1Q6JBY9 416 aa17.21■□□□□ 0.35
GPN1-212ENST00000616939 CADPS2Q86UW7 1296 aa17.21■□□□□ 0.35
GPN1-212ENST00000616939 KIAA0895Q8NCT3 520 aa17.21■□□□□ 0.35
GPN1-212ENST00000616939 MTMR8Q96EF0 704 aa17.21■□□□□ 0.35
GPN1-212ENST00000616939 TMBIM4Q9HC24 238 aa17.21■□□□□ 0.35
GPN1-212ENST00000616939 ARPP21Q9UBL0 812 aaPredicted RBP17.21■□□□□ 0.35
GPN1-212ENST00000616939 EPHB6O15197 1021 aa17.21■□□□□ 0.35
GPN1-212ENST00000616939 NCK2O43639 380 aa17.21■□□□□ 0.35
GPN1-212ENST00000616939 OR52Z1P0C646 297 aa17.21■□□□□ 0.35
GPN1-212ENST00000616939 CHRM1P11229 460 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms