RNA–Protein interactions for RNA: ENST00000614484.4

SRRT-215, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-215ENST00000614484 CCDC174Q6PII3 467 aa13.48□□□□□ -0.25
SRRT-215ENST00000614484 ANKRD13AQ8IZ07 590 aa13.48□□□□□ -0.25
SRRT-215ENST00000614484 NEK11Q8NG66 645 aa13.48□□□□□ -0.25
SRRT-215ENST00000614484 TNMDQ9H2S6 317 aa13.48□□□□□ -0.25
SRRT-215ENST00000614484 HOMER2Q9NSB8 354 aa13.48□□□□□ -0.25
SRRT-215ENST00000614484 TRMT1Q9NXH9 659 aaKnown RBP13.48□□□□□ -0.25
SRRT-215ENST00000614484 BIN2Q9UBW5 565 aaPredicted RBP13.48□□□□□ -0.25
SRRT-215ENST00000614484 MAD2L2Q9UI95 211 aa13.48□□□□□ -0.25
SRRT-215ENST00000614484 USP17L10C9JJH3 530 aa13.48□□□□□ -0.25
SRRT-215ENST00000614484 POLR3GO15318 223 aaPredicted RBP13.48□□□□□ -0.25
SRRT-215ENST00000614484 CYTH3O43739 400 aa13.48□□□□□ -0.25
SRRT-215ENST00000614484 CAPN15O75808 1086 aa13.48□□□□□ -0.25
SRRT-215ENST00000614484 PARP1P09874 1014 aaKnown RBP13.48□□□□□ -0.25
SRRT-215ENST00000614484 PCP11498 1178 aaKnown RBP13.48□□□□□ -0.25
SRRT-215ENST00000614484 CCDC144BQ3MJ40 725 aa13.48□□□□□ -0.25
SRRT-215ENST00000614484 ZNF280CQ8ND82 737 aa13.48□□□□□ -0.25
SRRT-215ENST00000614484 STK24Q9Y6E0 443 aa13.48□□□□□ -0.25
SRRT-215ENST00000614484 RPS6KA3P51812 740 aa13.47□□□□□ -0.25
SRRT-215ENST00000614484 FAM173BQ6P4H8 233 aa13.47□□□□□ -0.25
SRRT-215ENST00000614484 SGMS1Q86VZ5 419 aa13.47□□□□□ -0.25
SRRT-215ENST00000614484 AGXT2Q9BYV1 514 aa13.47□□□□□ -0.25
SRRT-215ENST00000614484 EMILIN3Q9NT22 766 aa13.47□□□□□ -0.25
SRRT-215ENST00000614484 KCNJ14Q9UNX9 436 aa13.47□□□□□ -0.25
SRRT-215ENST00000614484 PPP2R3BQ9Y5P8 575 aa13.47□□□□□ -0.25
SRRT-215ENST00000614484 SYNRGQ9UMZ2 1314 aa13.47□□□□□ -0.25
SRRT-215ENST00000614484 WDR90Q96KV7 1748 aa13.47□□□□□ -0.25
SRRT-215ENST00000614484 PFKFB2O60825 505 aa13.47□□□□□ -0.25
SRRT-215ENST00000614484 CDKL5O76039 1030 aa13.47□□□□□ -0.25
SRRT-215ENST00000614484 CYP4F22Q6NT55 531 aa13.47□□□□□ -0.25
SRRT-215ENST00000614484 NCAPG2Q86XI2 1143 aa13.47□□□□□ -0.25
SRRT-215ENST00000614484 NSUN7Q8NE18 718 aaKnown RBP13.47□□□□□ -0.25
SRRT-215ENST00000614484 PPM1EQ8WY54 764 aa13.47□□□□□ -0.25
SRRT-215ENST00000614484 ORC3Q9UBD5 711 aaPredicted RBP13.47□□□□□ -0.25
SRRT-215ENST00000614484 SCN4AP35499 1836 aa13.47□□□□□ -0.25
SRRT-215ENST00000614484 FLOT1O75955 427 aa13.47□□□□□ -0.25
SRRT-215ENST00000614484 KIF4AO95239 1232 aa13.47□□□□□ -0.25
SRRT-215ENST00000614484 TBC1D8BQ0IIM8 1120 aa13.47□□□□□ -0.25
SRRT-215ENST00000614484 C16orf87Q6PH81 154 aa13.47□□□□□ -0.25
SRRT-215ENST00000614484 MYLK4Q86YV6 388 aaPredicted RBP13.47□□□□□ -0.25
SRRT-215ENST00000614484 PIGSQ96S52 555 aa13.47□□□□□ -0.25
SRRT-215ENST00000614484 VPS54Q9P1Q0 977 aa13.47□□□□□ -0.25
SRRT-215ENST00000614484 GOLGA6L4A6NEF3 574 aa13.46□□□□□ -0.25
SRRT-215ENST00000614484 IPO5O00410 1097 aaKnown RBP13.46□□□□□ -0.25
SRRT-215ENST00000614484 ADAMTS3O15072 1205 aa13.46□□□□□ -0.25
SRRT-215ENST00000614484 TOMM70O94826 608 aa13.46□□□□□ -0.25
SRRT-215ENST00000614484 PLS1Q14651 629 aa13.46□□□□□ -0.25
SRRT-215ENST00000614484 ERCC6LQ2NKX8 1250 aa13.46□□□□□ -0.25
SRRT-215ENST00000614484 LRRC8AQ8IWT6 810 aa13.46□□□□□ -0.25
SRRT-215ENST00000614484 PHC3Q8NDX5 983 aa13.46□□□□□ -0.25
SRRT-215ENST00000614484 COA7Q96BR5 231 aa13.46□□□□□ -0.25
SRRT-215ENST00000614484 ZNF274Q96GC6 653 aaPredicted RBP13.46□□□□□ -0.25
SRRT-215ENST00000614484 UIMC1Q96RL1 719 aa13.46□□□□□ -0.25
SRRT-215ENST00000614484 RPAP3Q9H6T3 665 aaPredicted RBP13.46□□□□□ -0.25
SRRT-215ENST00000614484 PPME1Q9Y570 386 aa13.46□□□□□ -0.25
SRRT-215ENST00000614484 MYH8P13535 1937 aa13.46□□□□□ -0.25
SRRT-215ENST00000614484 FDPSP14324 419 aaKnown RBP13.46□□□□□ -0.26
SRRT-215ENST00000614484 VCAM1P19320 739 aa13.46□□□□□ -0.26
SRRT-215ENST00000614484 TPM4P67936 248 aa13.46□□□□□ -0.26
SRRT-215ENST00000614484 MCM6Q14566 821 aa13.46□□□□□ -0.26
SRRT-215ENST00000614484 NYAP1Q6ZVC0 841 aa13.46□□□□□ -0.26
SRRT-215ENST00000614484 HEATR3Q7Z4Q2 680 aa13.46□□□□□ -0.26
SRRT-215ENST00000614484 DRAXINQ8NBI3 349 aaPredicted RBP13.46□□□□□ -0.26
SRRT-215ENST00000614484 NEMFO60524 1076 aa13.45□□□□□ -0.26
SRRT-215ENST00000614484 CYP2C8P10632 490 aa13.45□□□□□ -0.26
SRRT-215ENST00000614484 ZNF165P49910 485 aa13.45□□□□□ -0.26
SRRT-215ENST00000614484 BACE1P56817 501 aa13.45□□□□□ -0.26
SRRT-215ENST00000614484 MAP3K10Q02779 954 aa13.45□□□□□ -0.26
SRRT-215ENST00000614484 RBBP5Q15291 538 aaKnown RBP13.45□□□□□ -0.26
SRRT-215ENST00000614484 SLC5A9Q2M3M2 681 aa13.45□□□□□ -0.26
SRRT-215ENST00000614484 EFCAB13Q8IY85 973 aa13.45□□□□□ -0.26
SRRT-215ENST00000614484 SMC1BQ8NDV3 1235 aa13.45□□□□□ -0.26
SRRT-215ENST00000614484 IQCGQ9H095 443 aaKnown RBP13.45□□□□□ -0.26
SRRT-215ENST00000614484 ZNF112Q9UJU3 913 aa13.45□□□□□ -0.26
SRRT-215ENST00000614484 TMX2Q9Y320 296 aa13.45□□□□□ -0.26
SRRT-215ENST00000614484 FHOD1Q9Y613 1164 aa13.45□□□□□ -0.26
SRRT-215ENST00000614484 MARCH6O60337 910 aa13.45□□□□□ -0.26
SRRT-215ENST00000614484 PNMA6AP0CW24 399 aaPredicted RBP13.45□□□□□ -0.26
SRRT-215ENST00000614484 BMP3P12645 472 aa13.45□□□□□ -0.26
SRRT-215ENST00000614484 ARID5BQ14865 1188 aa13.45□□□□□ -0.26
SRRT-215ENST00000614484 HOOK2Q96ED9 719 aa13.45□□□□□ -0.26
SRRT-215ENST00000614484 IL17RAQ96F46 866 aa13.45□□□□□ -0.26
SRRT-215ENST00000614484 CRACR2AQ9BSW2 395 aa13.45□□□□□ -0.26
SRRT-215ENST00000614484 TCP11L1Q9NUJ3 509 aa13.45□□□□□ -0.26
SRRT-215ENST00000614484 SPATS2LQ9NUQ6 558 aaKnown RBP13.45□□□□□ -0.26
SRRT-215ENST00000614484 NYAP2Q9P242 653 aa13.45□□□□□ -0.26
SRRT-215ENST00000614484 IMPDH2P12268 514 aa13.44□□□□□ -0.26
SRRT-215ENST00000614484 H2AFXP16104 143 aaPredicted RBP13.44□□□□□ -0.26
SRRT-215ENST00000614484 CLCN6P51797 869 aa13.44□□□□□ -0.26
SRRT-215ENST00000614484 LARP1BQ659C4 914 aaKnown RBP13.44□□□□□ -0.26
SRRT-215ENST00000614484 SAPCD2Q86UD0 394 aa13.44□□□□□ -0.26
SRRT-215ENST00000614484 ADGRF4Q8IZF3 695 aa13.44□□□□□ -0.26
SRRT-215ENST00000614484 ZSCAN31Q96LW9 406 aaPredicted RBP13.44□□□□□ -0.26
SRRT-215ENST00000614484 MTMR6Q9Y217 621 aa13.44□□□□□ -0.26
SRRT-215ENST00000614484 AFG3L2Q9Y4W6 797 aa13.44□□□□□ -0.26
SRRT-215ENST00000614484 PLA2G4AP47712 749 aa13.44□□□□□ -0.26
SRRT-215ENST00000614484 AKAP17AQ02040 695 aaKnown RBP13.44□□□□□ -0.26
SRRT-215ENST00000614484 NTRK3Q16288 839 aa13.44□□□□□ -0.26
SRRT-215ENST00000614484 GIMAP7Q8NHV1 300 aa13.44□□□□□ -0.26
SRRT-215ENST00000614484 PAGR1Q9BTK6 254 aa13.44□□□□□ -0.26
SRRT-215ENST00000614484 DNAJC25Q9H1X3 360 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms