RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 TSGA10Q9BZW7 698 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 KCNQ5Q9NR82 932 aa12.5□□□□□ -0.41
ATF3-211ENST00000613954 ATP1A1P05023 1023 aaKnown RBP12.49□□□□□ -0.41
ATF3-211ENST00000613954 PRCPP42785 496 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 SCNN1DP51172 638 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 HERVK_113P62684 666 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 HDLBPQ00341 1268 aaKnown RBP12.49□□□□□ -0.41
ATF3-211ENST00000613954 TFAP4Q01664 338 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 C16orf86Q6ZW13 317 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 CAGE1Q8TC20 777 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 ZNF507Q8TCN5 953 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 PSMD1Q99460 953 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 USP40Q9NVE5 1235 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 ENC1O14682 589 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 PSMA7O14818 248 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 PPIP5K2O43314 1243 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 NMT2O60551 498 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 SHOX2O60902 331 aaPredicted RBP12.49□□□□□ -0.41
ATF3-211ENST00000613954 ZBTB7AO95365 584 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 POLD1P28340 1107 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 STAT6P42226 847 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 ITIH3Q06033 890 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 TROAPQ12815 778 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 NPY5RQ15761 445 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 ZNF444Q8N0Y2 327 aaPredicted RBP12.49□□□□□ -0.41
ATF3-211ENST00000613954 FAM76AQ8TAV0 307 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 MTRQ99707 1265 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 TCP11L1Q9NUJ3 509 aa12.49□□□□□ -0.41
ATF3-211ENST00000613954 ZNF646O15015 1829 aaPredicted RBP12.48□□□□□ -0.41
ATF3-211ENST00000613954 MYH1P12882 1939 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 CNTNAP5Q8WYK1 1306 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 A6NNZ2 444 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 WNT7AO00755 349 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 PLEKHA8P1O95397 391 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 CALML3P27482 149 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 PPP1R2P41236 205 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 CRKP46108 304 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 CDK8P49336 464 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 NLRP5P59047 1200 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 TGFB2P61812 414 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 CDK17Q00537 523 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 TUBB8Q3ZCM7 444 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 SOGA3Q5TF21 947 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 APOBEC3HQ6NTF7 200 aaKnown RBP12.48□□□□□ -0.41
ATF3-211ENST00000613954 FOXR1Q6PIV2 292 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 WDR59Q6PJI9 974 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 CCNI2Q6ZMN8 369 aaPredicted RBP12.48□□□□□ -0.41
ATF3-211ENST00000613954 GBP6Q6ZN66 633 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 DGKHQ86XP1 1220 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 IRF2BP1Q8IU81 584 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 ANKS1AQ92625 1134 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 ZDHHC15Q96MV8 337 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 MTFR1LQ9H019 292 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 HDAC6Q9UBN7 1215 aa12.48□□□□□ -0.41
ATF3-211ENST00000613954 ZC3H4Q9UPT8 1303 aaKnown RBP12.47□□□□□ -0.41
ATF3-211ENST00000613954 SCN9AQ15858 1988 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 A0A087WUV0 522 aaPredicted RBP12.47□□□□□ -0.41
ATF3-211ENST00000613954 CPP00450 1065 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 TSPY3P0CV98 308 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 TSPY8P0CW00 308 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 SCG2P13521 617 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 RASA1P20936 1047 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 PICALMQ13492 652 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 ICE2Q659A1 982 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 RCSD1Q6JBY9 416 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 CDC42EP5Q6NZY7 148 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 PIK3AP1Q6ZUJ8 805 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 FAM114A1Q8IWE2 563 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 SLC44A5Q8NCS7 719 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 SELENOOQ9BVL4 669 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 DISC1Q9NRI5 854 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 EXOC1Q9NV70 894 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 TRIM10Q9UDY6 481 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 FAM184BQ9ULE4 1060 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 GDAQ9Y2T3 454 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 GOLGA6BA6NDN3 693 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 PES1O00541 588 aaKnown RBP12.47□□□□□ -0.41
ATF3-211ENST00000613954 COBLO75128 1261 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 MCM7P33993 719 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 GGCXP38435 758 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 ZBED6P86452 979 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 KIF5AQ12840 1032 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 PFKFB3Q16875 520 aaPredicted RBP12.47□□□□□ -0.41
ATF3-211ENST00000613954 KIAA0825Q8IV33 1275 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 MMGT1Q8N4V1 131 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 TRIM58Q8NG06 486 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 CCDC47Q96A33 483 aaKnown RBP12.47□□□□□ -0.41
ATF3-211ENST00000613954 DHTKD1Q96HY7 919 aaPredicted RBP12.47□□□□□ -0.41
ATF3-211ENST00000613954 TRIM47Q96LD4 638 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 PURBQ96QR8 312 aaKnown RBP12.47□□□□□ -0.41
ATF3-211ENST00000613954 VPS33BQ9H267 617 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 KAT14Q9H8E8 782 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 MAGEF1Q9HAY2 307 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 IL17RBQ9NRM6 502 aa12.47□□□□□ -0.41
ATF3-211ENST00000613954 ADAMTSL1Q8N6G6 1762 aa12.46□□□□□ -0.41
ATF3-211ENST00000613954 A0A1W2PQJ5 194 aa12.46□□□□□ -0.41
ATF3-211ENST00000613954 hCG_1642624A0A1W2PR95 340 aa12.46□□□□□ -0.41
ATF3-211ENST00000613954 BICDL2A1A5D9 508 aa12.46□□□□□ -0.41
ATF3-211ENST00000613954 GOLGA6CA6NDK9 693 aa12.46□□□□□ -0.41
ATF3-211ENST00000613954 GOLGA8KD6RF30 607 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms