RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 ATP6V0A4Q9HBG4 840 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 SEPT11Q9NVA2 429 aaKnown RBP6.17□□□□□ -1.42
CCL16-206ENST00000613642 FKBP14Q9NWM8 211 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 IL1RAPL1Q9NZN1 696 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 CIDEBQ9UHD4 219 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 FBXL5Q9UKA1 691 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 CCPG1Q9ULG6 757 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 C2CD2Q9Y426 696 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 ATXN2Q99700 1313 aaKnown RBP6.17□□□□□ -1.42
CCL16-206ENST00000613642 ZMYM3Q14202 1370 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 DCDC2BA2VCK2 349 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 KHNYNO15037 678 aaKnown RBP6.16□□□□□ -1.42
CCL16-206ENST00000613642 LSM1O15116 133 aaKnown RBP6.16□□□□□ -1.42
CCL16-206ENST00000613642 RNF8O76064 485 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 FAM157BP0CG42 384 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 CCDC166P0CW27 439 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 EZRP15311 586 aaKnown RBP6.16□□□□□ -1.42
CCL16-206ENST00000613642 CD33P20138 364 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 PMS2P54278 862 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 GJA9P57773 515 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 BPIFB3P59826 476 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 POLR2FP61218 127 aaKnown RBP6.16□□□□□ -1.42
CCL16-206ENST00000613642 DPYSQ14117 519 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 KLHL40Q2TBA0 621 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 ARSJQ5FYB0 599 aaPredicted RBP6.16□□□□□ -1.42
CCL16-206ENST00000613642 C10orf62Q5T681 223 aaPredicted RBP6.16□□□□□ -1.42
CCL16-206ENST00000613642 PCNX4Q63HM2 1172 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 NCCRP1Q6ZVX7 275 aaPredicted RBP6.16□□□□□ -1.42
CCL16-206ENST00000613642 RASGRP2Q7LDG7 609 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 NLRP9Q7RTR0 991 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 NPAS4Q8IUM7 802 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 TRIML2Q8N7C3 387 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 SYT2Q8N9I0 419 aaPredicted RBP6.16□□□□□ -1.42
CCL16-206ENST00000613642 SPATA18Q8TC71 538 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 RSAD2Q8WXG1 361 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 DPF3Q92784 378 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 GTF3C6Q969F1 213 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 SPDL1Q96EA4 605 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 SLC39A13Q96H72 371 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 CLMNQ96JQ2 1002 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 CGREF1Q99674 301 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 JPH2Q9BR39 696 aaPredicted RBP6.16□□□□□ -1.42
CCL16-206ENST00000613642 RTFDC1Q9BY42 306 aaPredicted RBP6.16□□□□□ -1.42
CCL16-206ENST00000613642 PARD6BQ9BYG5 372 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 GDPD2Q9HCC8 539 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 RIC8AQ9NPQ8 531 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 STAP2Q9UGK3 403 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 PPP1R9AQ9ULJ8 1098 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 TRIM17Q9Y577 477 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.16□□□□□ -1.42
CCL16-206ENST00000613642 USP3Q9Y6I4 520 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 YEATS2Q9ULM3 1422 aa6.16□□□□□ -1.42
CCL16-206ENST00000613642 FOXD2O60548 495 aaPredicted RBP6.15□□□□□ -1.42
CCL16-206ENST00000613642 NMT2O60551 498 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 TADA3O75528 432 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 TMCC1O94876 653 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 MYL3P08590 195 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 VIMP08670 466 aaKnown RBP6.15□□□□□ -1.42
CCL16-206ENST00000613642 PDGFRBP09619 1106 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 NCAM1P13591 858 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 TATP17735 454 aaPredicted RBP6.15□□□□□ -1.42
CCL16-206ENST00000613642 POLR2EP19388 210 aaKnown RBP6.15□□□□□ -1.42
CCL16-206ENST00000613642 CSTF2P33240 577 aaKnown RBP eCLIP6.15□□□□□ -1.42
CCL16-206ENST00000613642 PDE6BP35913 854 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 SKIV2L2P42285 1042 aaKnown RBP6.15□□□□□ -1.42
CCL16-206ENST00000613642 EPS15P42566 896 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 CTCFP49711 727 aaPredicted RBP6.15□□□□□ -1.42
CCL16-206ENST00000613642 OXCT1P55809 520 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 CDK17Q00537 523 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 KIF5AQ12840 1032 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 KIF22Q14807 665 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 WASHC4Q2M389 1173 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 CCDC153Q494R4 210 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 TNNI3KQ59H18 835 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 ZC3H12BQ5HYM0 836 aaKnown RBP6.15□□□□□ -1.42
CCL16-206ENST00000613642 CFAP157Q5JU67 520 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 WDR45BQ5MNZ6 344 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 SYCP2LQ5T4T6 812 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 SAMD5Q5TGI4 173 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 ZNF468Q5VIY5 522 aaPredicted RBP6.15□□□□□ -1.42
CCL16-206ENST00000613642 KIAA1614Q5VZ46 1190 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 CYP26C1Q6V0L0 522 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 DSTYKQ6XUX3 929 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 DGLUCYQ7Z3D6 616 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 CRACR2BQ8N4Y2 399 aaPredicted RBP6.15□□□□□ -1.42
CCL16-206ENST00000613642 SPERTQ8NA61 448 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 EXOC6Q8TAG9 804 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 SGCDQ92629 289 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 SH3KBP1Q96B97 665 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 HVCN1Q96D96 273 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 CLIP3Q96DZ5 547 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 POM121Q96HA1 1249 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 ERO1AQ96HE7 468 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 SERINC2Q96SA4 455 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.15□□□□□ -1.42
CCL16-206ENST00000613642 PIF1Q9H611 641 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 ZWILCHQ9H900 591 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 CLK4Q9HAZ1 481 aaKnown RBP6.15□□□□□ -1.42
CCL16-206ENST00000613642 CYP4F11Q9HBI6 524 aa6.15□□□□□ -1.42
CCL16-206ENST00000613642 SH3GLB2Q9NR46 395 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms