RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 PBX1P40424 430 aa14.11□□□□□ -0.15
PCDHGA4-202ENST00000612927 PAK1Q13153 545 aa14.11□□□□□ -0.15
PCDHGA4-202ENST00000612927 DNAJC21Q5F1R6 531 aaKnown RBP14.11□□□□□ -0.15
PCDHGA4-202ENST00000612927 MCTP2Q6DN12 878 aa14.11□□□□□ -0.15
PCDHGA4-202ENST00000612927 CCDC91Q7Z6B0 441 aa14.11□□□□□ -0.15
PCDHGA4-202ENST00000612927 TADA2BQ86TJ2 420 aa14.11□□□□□ -0.15
PCDHGA4-202ENST00000612927 CCDC102AQ96A19 550 aa14.11□□□□□ -0.15
PCDHGA4-202ENST00000612927 CEP89Q96ST8 783 aa14.11□□□□□ -0.15
PCDHGA4-202ENST00000612927 ZSWIM4Q9H7M6 989 aa14.11□□□□□ -0.15
PCDHGA4-202ENST00000612927 DNAJC18Q9H819 358 aa14.11□□□□□ -0.15
PCDHGA4-202ENST00000612927 GPCPD1Q9NPB8 672 aa14.11□□□□□ -0.15
PCDHGA4-202ENST00000612927 MYO3BQ8WXR4 1341 aa14.11□□□□□ -0.15
PCDHGA4-202ENST00000612927 LOC102724159A0A0B4J2E5 919 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 TRIM49BA6NDI0 452 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 TTLL1O95922 423 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 HLA-DOAP06340 250 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 PRCPP42785 496 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 AARSP49588 968 aaKnown RBP eCLIP14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 TCP10Q12799 353 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 PWP2Q15269 919 aaKnown RBP14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 AOC3Q16853 763 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 WHAMMP3Q1A5X7 153 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 LETM2Q2VYF4 491 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 ASPRV1Q53RT3 343 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 ZNF658Q5TYW1 1059 aaPredicted RBP14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 VPS16Q9H269 839 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 C6orf50Q9HD87 102 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 TAB2Q9NYJ8 693 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 PUF60Q9UHX1 559 aaKnown RBP14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 A0A0U1RQJ8 604 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 FAM196BA6NMK8 535 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 UBA7P41226 1012 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 EN1Q05925 392 aaPredicted RBP14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 KRT25Q7Z3Z0 450 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 PPFIBP1Q86W92 1011 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 C7orf43Q8WVR3 580 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 ATRIPQ8WXE1 791 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 PYM1Q9BRP8 204 aaKnown RBP14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 FAM204AQ9H8W3 233 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 RWDD2AQ9UIY3 292 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 SIPA1L1O43166 1804 aa14.1□□□□□ -0.15
PCDHGA4-202ENST00000612927 MPHOSPH10O00566 681 aaKnown RBP14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 CCNT1O60563 726 aaKnown RBP14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 GYPCP04921 128 aa14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 CASP14P31944 242 aa14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 SHROOM1Q2M3G4 852 aaPredicted RBP14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 SOGA3Q5TF21 947 aa14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 WDR93Q6P2C0 686 aa14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 RAD9BQ6WBX8 426 aa14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 ADGRG1Q9Y653 693 aa14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 C10orf71Q711Q0 1435 aa14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 GREB1LQ9C091 1923 aaPredicted RBP14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 CTAGE9A4FU28 777 aa14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 MFAP3LO75121 409 aa14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 GNA11P29992 359 aa14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 FXR1P51114 621 aaKnown RBP eCLIP14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 RBM5P52756 815 aaKnown RBP eCLIP14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 VSNL1P62760 191 aa14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 FKBP1AP62942 108 aaKnown RBP14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 ZNF543Q08ER8 600 aa14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 NONOQ15233 471 aaKnown RBP eCLIP14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 CNKSR1Q969H4 720 aa14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 COA7Q96BR5 231 aa14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 CTAGE1Q96RT6 745 aa14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 EHD4Q9H223 541 aa14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 TMEM260Q9NX78 707 aa14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 FAM198AQ9UFP1 575 aa14.09□□□□□ -0.15
PCDHGA4-202ENST00000612927 CTAGE15A4D2H0 777 aa14.08□□□□□ -0.15
PCDHGA4-202ENST00000612927 DDTLA6NHG4 134 aaPredicted RBP14.08□□□□□ -0.15
PCDHGA4-202ENST00000612927 N4BP3O15049 544 aa14.08□□□□□ -0.15
PCDHGA4-202ENST00000612927 CTAGE8P0CG41 777 aa14.08□□□□□ -0.15
PCDHGA4-202ENST00000612927 PMS1P54277 932 aaKnown RBP14.08□□□□□ -0.15
PCDHGA4-202ENST00000612927 ATP2B2Q01814 1243 aa14.08□□□□□ -0.15
PCDHGA4-202ENST00000612927 FILIP1LQ4L180 1135 aa14.08□□□□□ -0.15
PCDHGA4-202ENST00000612927 TTBK2Q6IQ55 1244 aa14.08□□□□□ -0.15
PCDHGA4-202ENST00000612927 SH3BP5LQ7L8J4 393 aa14.08□□□□□ -0.15
PCDHGA4-202ENST00000612927 CTAGE6Q86UF2 777 aa14.08□□□□□ -0.15
PCDHGA4-202ENST00000612927 CTAGE4Q8IX94 777 aa14.08□□□□□ -0.15
PCDHGA4-202ENST00000612927 AFAP1L1Q8TED9 768 aa14.08□□□□□ -0.15
PCDHGA4-202ENST00000612927 CAMKK2Q96RR4 588 aa14.08□□□□□ -0.15
PCDHGA4-202ENST00000612927 IRX2Q9BZI1 471 aaPredicted RBP14.08□□□□□ -0.15
PCDHGA4-202ENST00000612927 RMND1Q9NWS8 449 aa14.08□□□□□ -0.15
PCDHGA4-202ENST00000612927 BIN2Q9UBW5 565 aaPredicted RBP14.08□□□□□ -0.15
PCDHGA4-202ENST00000612927 ESYT2A0FGR8 921 aa14.08□□□□□ -0.16
PCDHGA4-202ENST00000612927 KCNJ18B7U540 433 aa14.08□□□□□ -0.16
PCDHGA4-202ENST00000612927 KCNJ12Q14500 433 aa14.08□□□□□ -0.16
PCDHGA4-202ENST00000612927 MRIQ9BWK5 157 aa14.08□□□□□ -0.16
PCDHGA4-202ENST00000612927 RGS17Q9UGC6 210 aaPredicted RBP14.08□□□□□ -0.16
PCDHGA4-202ENST00000612927 PLCG1P19174 1290 aa14.08□□□□□ -0.16
PCDHGA4-202ENST00000612927 COPB1P53618 953 aaKnown RBP14.08□□□□□ -0.16
PCDHGA4-202ENST00000612927 KIF4BQ2VIQ3 1234 aa14.08□□□□□ -0.16
PCDHGA4-202ENST00000612927 REXO1Q8N1G1 1221 aaKnown RBP14.08□□□□□ -0.16
PCDHGA4-202ENST00000612927 JMJD4Q9H9V9 463 aa14.08□□□□□ -0.16
PCDHGA4-202ENST00000612927 SUGCTQ9HAC7 445 aa14.08□□□□□ -0.16
PCDHGA4-202ENST00000612927 LZTFL1Q9NQ48 299 aa14.08□□□□□ -0.16
PCDHGA4-202ENST00000612927 STK32BQ9NY57 414 aa14.08□□□□□ -0.16
PCDHGA4-202ENST00000612927 LIMA1Q9UHB6 759 aaKnown RBP14.08□□□□□ -0.16
PCDHGA4-202ENST00000612927 RNF225M0QZC1 329 aaPredicted RBP14.07□□□□□ -0.16
PCDHGA4-202ENST00000612927 KLRC4O43908 158 aa14.07□□□□□ -0.16
PCDHGA4-202ENST00000612927 RNF40O75150 1001 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms