RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 NCOA5Q9HCD5 579 aaKnown RBP13.09□□□□□ -0.31
CCL3L3-201ENST00000612839 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.09□□□□□ -0.31
CCL3L3-201ENST00000612839 COL20A1Q9P218 1284 aa13.09□□□□□ -0.31
CCL3L3-201ENST00000612839 CFBP00751 764 aa13.08□□□□□ -0.32
CCL3L3-201ENST00000612839 ZNF865P0CJ78 1059 aaPredicted RBP13.08□□□□□ -0.32
CCL3L3-201ENST00000612839 CNGA1P29973 690 aa13.08□□□□□ -0.32
CCL3L3-201ENST00000612839 ALDH5A1P51649 535 aaPredicted RBP13.08□□□□□ -0.32
CCL3L3-201ENST00000612839 HSD17B4P51659 736 aa13.08□□□□□ -0.32
CCL3L3-201ENST00000612839 PDCD7Q8N8D1 485 aaKnown RBP13.08□□□□□ -0.32
CCL3L3-201ENST00000612839 SYTL5Q8TDW5 730 aaPredicted RBP13.08□□□□□ -0.32
CCL3L3-201ENST00000612839 MORC4Q8TE76 937 aa13.08□□□□□ -0.32
CCL3L3-201ENST00000612839 KATNBL1Q9H079 304 aa13.08□□□□□ -0.32
CCL3L3-201ENST00000612839 CRISPLD2Q9H0B8 497 aa13.08□□□□□ -0.32
CCL3L3-201ENST00000612839 ADD3Q9UEY8 706 aaKnown RBP13.08□□□□□ -0.32
CCL3L3-201ENST00000612839 NRBP1Q9UHY1 535 aa13.08□□□□□ -0.32
CCL3L3-201ENST00000612839 TPCN1Q9ULQ1 816 aa13.08□□□□□ -0.32
CCL3L3-201ENST00000612839 V9GY48 417 aaPredicted RBP13.08□□□□□ -0.32
CCL3L3-201ENST00000612839 ASB14A6NK59 587 aa13.07□□□□□ -0.32
CCL3L3-201ENST00000612839 SEPT4O43236 478 aa13.07□□□□□ -0.32
CCL3L3-201ENST00000612839 HOXA13P31271 388 aaPredicted RBP13.07□□□□□ -0.32
CCL3L3-201ENST00000612839 RGS19P49795 217 aa13.07□□□□□ -0.32
CCL3L3-201ENST00000612839 STK3Q13188 491 aa13.07□□□□□ -0.32
CCL3L3-201ENST00000612839 ANKRD1Q15327 319 aa13.07□□□□□ -0.32
CCL3L3-201ENST00000612839 SAMD3Q8N6K7 520 aa13.07□□□□□ -0.32
CCL3L3-201ENST00000612839 DNERQ8NFT8 737 aa13.07□□□□□ -0.32
CCL3L3-201ENST00000612839 GPKOWQ92917 476 aaPredicted RBP eCLIP13.07□□□□□ -0.32
CCL3L3-201ENST00000612839 TAAR1Q96RJ0 339 aa13.07□□□□□ -0.32
CCL3L3-201ENST00000612839 BACH2Q9BYV9 841 aa13.07□□□□□ -0.32
CCL3L3-201ENST00000612839 ABHD16BQ9H3Z7 469 aa13.07□□□□□ -0.32
CCL3L3-201ENST00000612839 MAP3K20Q9NYL2 800 aaKnown RBP13.07□□□□□ -0.32
CCL3L3-201ENST00000612839 DDX20Q9UHI6 824 aaKnown RBP13.07□□□□□ -0.32
CCL3L3-201ENST00000612839 CNPY2Q9Y2B0 182 aa13.07□□□□□ -0.32
CCL3L3-201ENST00000612839 LOC102724159A0A0B4J2E5 919 aa13.06□□□□□ -0.32
CCL3L3-201ENST00000612839 PPFIA3O75145 1194 aa13.06□□□□□ -0.32
CCL3L3-201ENST00000612839 IFNAR1P17181 557 aa13.06□□□□□ -0.32
CCL3L3-201ENST00000612839 EDNRBP24530 442 aa13.06□□□□□ -0.32
CCL3L3-201ENST00000612839 SCRN1Q12765 414 aa13.06□□□□□ -0.32
CCL3L3-201ENST00000612839 ACVR2BQ13705 512 aa13.06□□□□□ -0.32
CCL3L3-201ENST00000612839 PWP2Q15269 919 aaKnown RBP13.06□□□□□ -0.32
CCL3L3-201ENST00000612839 WWC2Q6AWC2 1192 aa13.06□□□□□ -0.32
CCL3L3-201ENST00000612839 TYW1BQ6NUM6 668 aa13.06□□□□□ -0.32
CCL3L3-201ENST00000612839 HEATR3Q7Z4Q2 680 aa13.06□□□□□ -0.32
CCL3L3-201ENST00000612839 PHKBQ93100 1093 aa13.06□□□□□ -0.32
CCL3L3-201ENST00000612839 UPF2Q9HAU5 1272 aaKnown RBP13.06□□□□□ -0.32
CCL3L3-201ENST00000612839 GCOM1H8Y6P7 765 aaPredicted RBP13.05□□□□□ -0.32
CCL3L3-201ENST00000612839 SNPHO15079 494 aa13.05□□□□□ -0.32
CCL3L3-201ENST00000612839 PRPF3O43395 683 aaKnown RBP13.05□□□□□ -0.32
CCL3L3-201ENST00000612839 MSCO60682 206 aa13.05□□□□□ -0.32
CCL3L3-201ENST00000612839 TFRCP02786 760 aaKnown RBP13.05□□□□□ -0.32
CCL3L3-201ENST00000612839 POLR2MP0CAP2 368 aa13.05□□□□□ -0.32
CCL3L3-201ENST00000612839 PKN1Q16512 942 aa13.05□□□□□ -0.32
CCL3L3-201ENST00000612839 PFKFB3Q16875 520 aaPredicted RBP13.05□□□□□ -0.32
CCL3L3-201ENST00000612839 ANO1Q5XXA6 986 aa13.05□□□□□ -0.32
CCL3L3-201ENST00000612839 EEPD1Q7L9B9 569 aa13.05□□□□□ -0.32
CCL3L3-201ENST00000612839 RNF26Q9BY78 433 aaPredicted RBP13.05□□□□□ -0.32
CCL3L3-201ENST00000612839 ZHX1Q9UKY1 873 aaPredicted RBP13.05□□□□□ -0.32
CCL3L3-201ENST00000612839 OGDHLQ9ULD0 1010 aa13.05□□□□□ -0.32
CCL3L3-201ENST00000612839 STXBP3O00186 592 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 PIK3CDO00329 1044 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 MEIS2O14770 477 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 ADCY6O43306 1168 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 PFKFB2O60825 505 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 LARGE1O95461 756 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 SCG2P13521 617 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 AKR1A1P14550 325 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 ME3Q16798 604 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 CCDC144BQ3MJ40 725 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 USP17L6PQ6QN14 398 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 NOL8Q76FK4 1167 aaKnown RBP13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 FBXO16Q8IX29 292 aaPredicted RBP13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 NSUN6Q8TEA1 469 aaKnown RBP13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 TBC1D32Q96NH3 1257 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 RMDN3Q96TC7 470 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 TMEM121BQ9BXQ6 578 aaPredicted RBP13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 SLKQ9H2G2 1235 aaPredicted RBP13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 PXMP2Q9NR77 195 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 BARHL2Q9NY43 387 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 KIAA1217Q5T5P2 1943 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 hCG_1984214I3L0E3 225 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 PSEN1P49768 467 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 TAPT1Q6NXT6 567 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 UBE2Q1Q7Z7E8 422 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 FCHSD1Q86WN1 690 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 ZNF713Q8N859 430 aaPredicted RBP13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 LENG1Q96BZ8 264 aaPredicted RBP13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 SLC26A6Q9BXS9 759 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 PSTPIP2Q9H939 334 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 PDGFCQ9NRA1 345 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 RBM27Q9P2N5 1060 aaKnown RBP13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 FAM184BQ9ULE4 1060 aa13.04□□□□□ -0.32
CCL3L3-201ENST00000612839 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.03□□□□□ -0.32
CCL3L3-201ENST00000612839 CPLX1O14810 134 aa13.03□□□□□ -0.32
CCL3L3-201ENST00000612839 CAPN2P17655 700 aa13.03□□□□□ -0.32
CCL3L3-201ENST00000612839 EIF2AK2P19525 551 aaKnown RBP13.03□□□□□ -0.32
CCL3L3-201ENST00000612839 ADCYAP1R1P41586 468 aa13.03□□□□□ -0.32
CCL3L3-201ENST00000612839 NAPAP54920 295 aa13.03□□□□□ -0.32
CCL3L3-201ENST00000612839 PDE4DQ08499 809 aa13.03□□□□□ -0.32
CCL3L3-201ENST00000612839 ARHGEF16Q5VV41 709 aa13.03□□□□□ -0.32
CCL3L3-201ENST00000612839 PPP1R18Q6NYC8 613 aa13.03□□□□□ -0.32
CCL3L3-201ENST00000612839 NECAB1Q8N987 351 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms