RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 M0R2N6 131 aa25.26■■□□□ 1.63
UBE3C-209ENST00000611269 CNMDO75829 334 aa25.26■■□□□ 1.63
UBE3C-209ENST00000611269 PTPREP23469 700 aa25.26■■□□□ 1.63
UBE3C-209ENST00000611269 ZNF165P49910 485 aa25.26■■□□□ 1.63
UBE3C-209ENST00000611269 HTRA3P83110 453 aa25.26■■□□□ 1.63
UBE3C-209ENST00000611269 NOGQ13253 232 aa25.26■■□□□ 1.63
UBE3C-209ENST00000611269 ZSCAN30Q86W11 494 aa25.26■■□□□ 1.63
UBE3C-209ENST00000611269 PARK7Q99497 189 aaKnown RBP25.26■■□□□ 1.63
UBE3C-209ENST00000611269 AOC2O75106 756 aa25.26■■□□□ 1.63
UBE3C-209ENST00000611269 MRPL12P52815 198 aaKnown RBP25.26■■□□□ 1.63
UBE3C-209ENST00000611269 UBE2SQ16763 222 aa25.26■■□□□ 1.63
UBE3C-209ENST00000611269 REXO1Q8N1G1 1221 aaKnown RBP25.26■■□□□ 1.63
UBE3C-209ENST00000611269 TRERF1Q96PN7 1200 aa25.26■■□□□ 1.63
UBE3C-209ENST00000611269 DNAJC25Q9H1X3 360 aa25.26■■□□□ 1.63
UBE3C-209ENST00000611269 PCDHA6Q9UN73 950 aa25.26■■□□□ 1.63
UBE3C-209ENST00000611269 RABGAP1Q9Y3P9 1069 aa25.26■■□□□ 1.63
UBE3C-209ENST00000611269 PCDHB6Q9Y5E3 794 aa25.26■■□□□ 1.63
UBE3C-209ENST00000611269 PCDHA8Q9Y5H6 950 aa25.26■■□□□ 1.63
UBE3C-209ENST00000611269 SYKP43405 635 aa25.25■■□□□ 1.63
UBE3C-209ENST00000611269 NOM1Q5C9Z4 860 aaKnown RBP25.25■■□□□ 1.63
UBE3C-209ENST00000611269 MUM1L1Q5H9M0 696 aa25.25■■□□□ 1.63
UBE3C-209ENST00000611269 USP17L6PQ6QN14 398 aa25.25■■□□□ 1.63
UBE3C-209ENST00000611269 ZNF579Q8NAF0 562 aaKnown RBP25.25■■□□□ 1.63
UBE3C-209ENST00000611269 CLEC4DQ8WXI8 215 aa25.25■■□□□ 1.63
UBE3C-209ENST00000611269 SPATC1LQ9H0A9 340 aa25.25■■□□□ 1.63
UBE3C-209ENST00000611269 ANO10Q9NW15 660 aa25.25■■□□□ 1.63
UBE3C-209ENST00000611269 KIAA1468Q9P260 1216 aa25.25■■□□□ 1.63
UBE3C-209ENST00000611269 BIN2Q9UBW5 565 aaPredicted RBP25.25■■□□□ 1.63
UBE3C-209ENST00000611269 NFIBO00712 420 aa25.24■■□□□ 1.63
UBE3C-209ENST00000611269 EARS2Q5JPH6 523 aaKnown RBP25.24■■□□□ 1.63
UBE3C-209ENST00000611269 LUZP1Q86V48 1076 aa25.24■■□□□ 1.63
UBE3C-209ENST00000611269 GTF3C2Q8WUA4 911 aaPredicted RBP25.24■■□□□ 1.63
UBE3C-209ENST00000611269 CLIC6Q96NY7 704 aa25.24■■□□□ 1.63
UBE3C-209ENST00000611269 GLT8D2Q9H1C3 349 aa25.24■■□□□ 1.63
UBE3C-209ENST00000611269 ZCCHC17Q9NP64 241 aaKnown RBP25.24■■□□□ 1.63
UBE3C-209ENST00000611269 RNF146Q9NTX7 359 aa25.24■■□□□ 1.63
UBE3C-209ENST00000611269 TMEM260Q9NX78 707 aa25.24■■□□□ 1.63
UBE3C-209ENST00000611269 FBXO2Q9UK22 296 aaPredicted RBP25.24■■□□□ 1.63
UBE3C-209ENST00000611269 MEIS2O14770 477 aa25.23■■□□□ 1.63
UBE3C-209ENST00000611269 TM4SF4P48230 202 aa25.23■■□□□ 1.63
UBE3C-209ENST00000611269 TBC1D5Q92609 795 aa25.23■■□□□ 1.63
UBE3C-209ENST00000611269 NOL7Q9UMY1 257 aaKnown RBP25.23■■□□□ 1.63
UBE3C-209ENST00000611269 RBBP6Q7Z6E9 1792 aaKnown RBP25.23■■□□□ 1.63
UBE3C-209ENST00000611269 FAM205CA6NFA0 338 aa25.23■■□□□ 1.63
UBE3C-209ENST00000611269 JAKMIP3Q5VZ66 844 aa25.23■■□□□ 1.63
UBE3C-209ENST00000611269 SRPRBQ9Y5M8 271 aaKnown RBP25.23■■□□□ 1.63
UBE3C-209ENST00000611269 AP5Z1O43299 807 aa25.22■■□□□ 1.63
UBE3C-209ENST00000611269 CFBP00751 764 aa25.22■■□□□ 1.63
UBE3C-209ENST00000611269 HOXA13P31271 388 aaPredicted RBP25.22■■□□□ 1.63
UBE3C-209ENST00000611269 CLCN1P35523 988 aa25.22■■□□□ 1.63
UBE3C-209ENST00000611269 CLK2P49760 499 aaKnown RBP25.22■■□□□ 1.63
UBE3C-209ENST00000611269 Q3C1V9 767 aa25.22■■□□□ 1.63
UBE3C-209ENST00000611269 PIK3AP1Q6ZUJ8 805 aa25.22■■□□□ 1.63
UBE3C-209ENST00000611269 RIOX2Q8IUF8 465 aa25.22■■□□□ 1.63
UBE3C-209ENST00000611269 ELOA2Q8IYF1 753 aaPredicted RBP25.22■■□□□ 1.63
UBE3C-209ENST00000611269 ANKRD13CQ8N6S4 541 aa25.22■■□□□ 1.63
UBE3C-209ENST00000611269 BMP15O95972 392 aa25.21■■□□□ 1.63
UBE3C-209ENST00000611269 GCLCP48506 637 aaPredicted RBP25.21■■□□□ 1.63
UBE3C-209ENST00000611269 ERVK-9P63128 1117 aa25.21■■□□□ 1.63
UBE3C-209ENST00000611269 ERVK-24P63145 666 aa25.21■■□□□ 1.63
UBE3C-209ENST00000611269 IQCB1Q15051 598 aa25.21■■□□□ 1.63
UBE3C-209ENST00000611269 TAF1CQ15572 869 aaPredicted RBP25.21■■□□□ 1.63
UBE3C-209ENST00000611269 MOV10L1Q9BXT6 1211 aaKnown RBP25.21■■□□□ 1.63
UBE3C-209ENST00000611269 PIK3CDO00329 1044 aa25.21■■□□□ 1.63
UBE3C-209ENST00000611269 TKFCQ3LXA3 575 aa25.21■■□□□ 1.63
UBE3C-209ENST00000611269 KCNH3Q9ULD8 1083 aa25.21■■□□□ 1.63
UBE3C-209ENST00000611269 CCDC194A0A1B0GVG4 234 aa25.2■■□□□ 1.62
UBE3C-209ENST00000611269 GCOM1H8Y6P7 765 aaPredicted RBP25.2■■□□□ 1.62
UBE3C-209ENST00000611269 POLR2MP0CAP2 368 aa25.2■■□□□ 1.62
UBE3C-209ENST00000611269 MCF2L2Q86YR7 1114 aa25.2■■□□□ 1.62
UBE3C-209ENST00000611269 TRAPPC10P48553 1259 aa25.19■■□□□ 1.62
UBE3C-209ENST00000611269 C11orf57Q6ZUT1 292 aaPredicted RBP25.19■■□□□ 1.62
UBE3C-209ENST00000611269 KRT25Q7Z3Z0 450 aa25.19■■□□□ 1.62
UBE3C-209ENST00000611269 GPRC5AQ8NFJ5 357 aa25.19■■□□□ 1.62
UBE3C-209ENST00000611269 ACAD9Q9H845 621 aa25.19■■□□□ 1.62
UBE3C-209ENST00000611269 VEGFBP49765 207 aa25.19■■□□□ 1.62
UBE3C-209ENST00000611269 NCAPG2Q86XI2 1143 aa25.19■■□□□ 1.62
UBE3C-209ENST00000611269 FAM13BQ9NYF5 915 aa25.19■■□□□ 1.62
UBE3C-209ENST00000611269 ERCC3P19447 782 aa25.18■■□□□ 1.62
UBE3C-209ENST00000611269 HSD17B4P51659 736 aa25.18■■□□□ 1.62
UBE3C-209ENST00000611269 NSMFQ6X4W1 530 aa25.18■■□□□ 1.62
UBE3C-209ENST00000611269 CHST13Q8NET6 341 aa25.18■■□□□ 1.62
UBE3C-209ENST00000611269 NAT10Q9H0A0 1025 aaKnown RBP25.18■■□□□ 1.62
UBE3C-209ENST00000611269 R3HDMLQ9H3Y0 253 aa25.18■■□□□ 1.62
UBE3C-209ENST00000611269 MORF4L1Q9UBU8 362 aa25.18■■□□□ 1.62
UBE3C-209ENST00000611269 ADGRA2Q96PE1 1338 aa25.18■■□□□ 1.62
UBE3C-209ENST00000611269 PCNTO95613 3336 aa25.18■■□□□ 1.62
UBE3C-209ENST00000611269 FCHSD1Q86WN1 690 aa25.17■■□□□ 1.62
UBE3C-209ENST00000611269 TEX2Q8IWB9 1127 aa25.17■■□□□ 1.62
UBE3C-209ENST00000611269 SLC25A27O95847 323 aa25.17■■□□□ 1.62
UBE3C-209ENST00000611269 PTMAP06454 111 aaKnown RBP25.17■■□□□ 1.62
UBE3C-209ENST00000611269 ATP2B1P20020 1258 aa25.17■■□□□ 1.62
UBE3C-209ENST00000611269 PLCB2Q00722 1185 aa25.17■■□□□ 1.62
UBE3C-209ENST00000611269 GHRHRQ02643 423 aa25.17■■□□□ 1.62
UBE3C-209ENST00000611269 AP3B2Q13367 1082 aa25.17■■□□□ 1.62
UBE3C-209ENST00000611269 NONOQ15233 471 aaKnown RBP eCLIP25.17■■□□□ 1.625e-7■■■■□ 19.9
UBE3C-209ENST00000611269 INF2Q27J81 1249 aa25.17■■□□□ 1.62
UBE3C-209ENST00000611269 RNF207Q6ZRF8 634 aa25.17■■□□□ 1.62
UBE3C-209ENST00000611269 CEP57L1Q8IYX8 460 aa25.17■■□□□ 1.62
UBE3C-209ENST00000611269 ERCC4Q92889 916 aaPredicted RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms