RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, human

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11B-205	ENST00000611150	POTEE	Q6S8J3	1075 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	SLC12A6	Q9UHW9	1150 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	NSD3	Q9BZ95	1437 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	SETD1A	O15047	1707 aa	Known RBP	18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	RAB11FIP3	O75154	756 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	ASL	P04424	464 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	KCNA2	P16389	499 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	PSMA5	P28066	241 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	TNFRSF8	P28908	595 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	TCF7	P36402	384 aa	Predicted RBP	18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	GPSM2	P81274	684 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	IMMT	Q16891	758 aa	Known RBP	18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	FAM133B	Q5BKY9	247 aa	Known RBP	18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	SCUBE1	Q8IWY4	988 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	DNAJC9	Q8WXX5	260 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	HAUS1	Q96CS2	278 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	IFT74	Q96LB3	600 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	SIKE1	Q9BRV8	207 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	PPP1R12C	Q9BZL4	782 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	PFDN4	Q9NQP4	134 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	PCDHA7	Q9UN72	937 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	PRELID1	Q9Y255	219 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	NEDD4	P46934	1319 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	ENC1	O14682	589 aa		18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	DRD4	P21917	467 aa		18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	SARS	P49591	514 aa	Known RBP	18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	VAV2	P52735	878 aa		18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	ZNF131	P52739	623 aa		18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	PDE1B	Q01064	536 aa		18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	RSPH3	Q86UC2	560 aa		18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	RNF10	Q8N5U6	811 aa	Known RBP	18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	RAPGEF5	Q92565	580 aa		18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	SPATA16	Q9BXB7	569 aa		18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	NRXN3	Q9Y4C0	1643 aa		18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	IGF2BP3	O00425	579 aa	Known RBP eCLIP	18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	ORC4	O43929	436 aa		18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	RAD21	O60216	631 aa		18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	SRGAP2	O75044	1071 aa		18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	NFKBIA	P25963	317 aa		18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	GUCY2D	Q02846	1103 aa		18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	LMNB2	Q03252	620 aa		18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	DUS1L	Q6P1R4	473 aa	Known RBP	18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	DAAM2	Q86T65	1068 aa		18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	WDR75	Q8IWA0	830 aa	Known RBP	18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	MAP7D3	Q8IWC1	876 aa		18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	STK11IP	Q8N1F8	1099 aa		18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	TSPYL6	Q8N831	410 aa		18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	ATP8B4	Q8TF62	1192 aa		18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	SYNC	Q9H7C4	482 aa		18.84	■□□□□ 0.61
CDK11B-205	ENST00000611150	MYPN	Q86TC9	1320 aa		18.83	■□□□□ 0.61
CDK11B-205	ENST00000611150	ACTN4	O43707	911 aa	Known RBP	18.83	■□□□□ 0.61
CDK11B-205	ENST00000611150	ITGA2B	P08514	1039 aa		18.83	■□□□□ 0.61
CDK11B-205	ENST00000611150	HSPA1L	P34931	641 aa		18.83	■□□□□ 0.61
CDK11B-205	ENST00000611150	CACNA2D1	P54289	1103 aa		18.83	■□□□□ 0.61
CDK11B-205	ENST00000611150	GEMIN4	P57678	1058 aa	Known RBP	18.83	■□□□□ 0.61
CDK11B-205	ENST00000611150	ATP8B2	P98198	1209 aa		18.83	■□□□□ 0.61
CDK11B-205	ENST00000611150	C2orf54	Q08AI8	447 aa		18.83	■□□□□ 0.61
CDK11B-205	ENST00000611150	WDR78	Q5VTH9	848 aa		18.83	■□□□□ 0.61
CDK11B-205	ENST00000611150	C3orf67	Q6ZVT6	689 aa		18.83	■□□□□ 0.61
CDK11B-205	ENST00000611150	TRPM8	Q7Z2W7	1104 aa		18.83	■□□□□ 0.61
CDK11B-205	ENST00000611150	TMTC1	Q8IUR5	882 aa		18.83	■□□□□ 0.61
CDK11B-205	ENST00000611150	ANKRD24	Q8TF21	1146 aa		18.83	■□□□□ 0.61
CDK11B-205	ENST00000611150	IRGQ	Q8WZA9	623 aa		18.83	■□□□□ 0.61
CDK11B-205	ENST00000611150	RNF25	Q96BH1	459 aa	Predicted RBP	18.83	■□□□□ 0.61
CDK11B-205	ENST00000611150	CCDC51	Q96ER9	411 aa		18.83	■□□□□ 0.61
CDK11B-205	ENST00000611150	AGBL1	Q96MI9	1066 aa		18.83	■□□□□ 0.61
CDK11B-205	ENST00000611150	BHMT2	Q9H2M3	363 aa		18.83	■□□□□ 0.61
CDK11B-205	ENST00000611150	INTU	Q9ULD6	942 aa		18.83	■□□□□ 0.61
CDK11B-205	ENST00000611150	CTDP1	Q9Y5B0	961 aa	Predicted RBP	18.83	■□□□□ 0.61
CDK11B-205	ENST00000611150	PHF20L1	A8MW92	1017 aa		18.83	■□□□□ 0.6
CDK11B-205	ENST00000611150	GNAI2	P04899	355 aa		18.83	■□□□□ 0.6
CDK11B-205	ENST00000611150	ATP1A1	P05023	1023 aa	Known RBP	18.83	■□□□□ 0.6
CDK11B-205	ENST00000611150	POR	P16435	677 aa	Predicted RBP	18.83	■□□□□ 0.6
CDK11B-205	ENST00000611150	CCT8	P50990	548 aa		18.83	■□□□□ 0.6
CDK11B-205	ENST00000611150	RAD23B	P54727	409 aa		18.83	■□□□□ 0.6
CDK11B-205	ENST00000611150	ANKRD13B	Q86YJ7	626 aa		18.83	■□□□□ 0.6
CDK11B-205	ENST00000611150	SLC43A3	Q8NBI5	491 aa		18.83	■□□□□ 0.6
CDK11B-205	ENST00000611150	FAM136A	Q96C01	138 aa		18.83	■□□□□ 0.6
CDK11B-205	ENST00000611150	CHMP6	Q96FZ7	201 aa		18.83	■□□□□ 0.6
CDK11B-205	ENST00000611150	DHTKD1	Q96HY7	919 aa	Predicted RBP	18.83	■□□□□ 0.6
CDK11B-205	ENST00000611150	CENPO	Q9BU64	300 aa		18.83	■□□□□ 0.6
CDK11B-205	ENST00000611150	USH1C	Q9Y6N9	552 aa		18.83	■□□□□ 0.6
CDK11B-205	ENST00000611150	AFF2	P51816	1311 aa		18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	TBC1D12	O60347	775 aa		18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	CALB2	P22676	271 aa		18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	SLC2A7	Q6PXP3	512 aa		18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	KRI1	Q8N9T8	703 aa	Known RBP	18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	AIDA	Q96BJ3	306 aa		18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	KLHL29	Q96CT2	875 aa		18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	IQCD	Q96DY2	449 aa		18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	SPG7	Q9UQ90	795 aa		18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	CARD8	Q9Y2G2	431 aa		18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	STK38L	Q9Y2H1	464 aa		18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	TIMM22	Q9Y584	194 aa		18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	CASP14	P31944	242 aa		18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	PDE6C	P51160	858 aa		18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	DDB1	Q16531	1140 aa		18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	CCDC129	Q6ZRS4	1044 aa		18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	PALB2	Q86YC2	1186 aa		18.82	■□□□□ 0.6
CDK11B-205	ENST00000611150	DQX1	Q8TE96	717 aa	Known RBP	18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 180.1 ms