RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 GGNQ86UU5 652 aa8.25□□□□□ -1.09
LINC00458-206ENST00000607494 FERMT3Q86UX7 667 aa8.25□□□□□ -1.09
LINC00458-206ENST00000607494 SMARCC2Q8TAQ2 1214 aa8.25□□□□□ -1.09
LINC00458-206ENST00000607494 RASGRP4Q8TDF6 673 aa8.25□□□□□ -1.09
LINC00458-206ENST00000607494 SYT3Q9BQG1 590 aa8.25□□□□□ -1.09
LINC00458-206ENST00000607494 LGR4Q9BXB1 951 aa8.25□□□□□ -1.09
LINC00458-206ENST00000607494 CAPN10Q9HC96 672 aa8.25□□□□□ -1.09
LINC00458-206ENST00000607494 PPM1BO75688 479 aa8.24□□□□□ -1.09
LINC00458-206ENST00000607494 B3GNT8Q7Z7M8 397 aa8.24□□□□□ -1.09
LINC00458-206ENST00000607494 CABP7Q86V35 215 aa8.24□□□□□ -1.09
LINC00458-206ENST00000607494 ARHGEF39Q8N4T4 335 aa8.24□□□□□ -1.09
LINC00458-206ENST00000607494 FAM169BQ8N8A8 192 aa8.24□□□□□ -1.09
LINC00458-206ENST00000607494 ZNF513Q8N8E2 541 aaPredicted RBP8.24□□□□□ -1.09
LINC00458-206ENST00000607494 C19orf47Q8N9M1 422 aaKnown RBP8.24□□□□□ -1.09
LINC00458-206ENST00000607494 OR6P1Q8NGX9 317 aa8.24□□□□□ -1.09
LINC00458-206ENST00000607494 TSPAN17Q96FV3 270 aa8.24□□□□□ -1.09
LINC00458-206ENST00000607494 SHDQ96IW2 340 aa8.24□□□□□ -1.09
LINC00458-206ENST00000607494 SMARCA5O60264 1052 aaPredicted RBP8.23□□□□□ -1.09
LINC00458-206ENST00000607494 PLP2Q04941 152 aa8.23□□□□□ -1.09
LINC00458-206ENST00000607494 GNL2Q13823 731 aaKnown RBP8.23□□□□□ -1.09
LINC00458-206ENST00000607494 KIAA1211LQ6NV74 962 aa8.23□□□□□ -1.09
LINC00458-206ENST00000607494 ACBD3Q9H3P7 528 aa8.23□□□□□ -1.09
LINC00458-206ENST00000607494 USP40Q9NVE5 1235 aa8.23□□□□□ -1.09
LINC00458-206ENST00000607494 CLEC1BQ9P126 229 aa8.23□□□□□ -1.09
LINC00458-206ENST00000607494 DUSP10Q9Y6W6 482 aa8.23□□□□□ -1.09
LINC00458-206ENST00000607494 NPHP3-ACAD11A0A0J9YXS1 232 aa8.22□□□□□ -1.09
LINC00458-206ENST00000607494 C7orf72A4D263 438 aa8.22□□□□□ -1.09
LINC00458-206ENST00000607494 SH3D21A4FU49 640 aa8.22□□□□□ -1.09
LINC00458-206ENST00000607494 PAMP19021 973 aa8.22□□□□□ -1.09
LINC00458-206ENST00000607494 WWC2Q6AWC2 1192 aa8.22□□□□□ -1.09
LINC00458-206ENST00000607494 NETO2Q8NC67 525 aa8.22□□□□□ -1.09
LINC00458-206ENST00000607494 INPP5FQ9Y2H2 1132 aa8.22□□□□□ -1.09
LINC00458-206ENST00000607494 KCNH1O95259 989 aa8.21□□□□□ -1.1
LINC00458-206ENST00000607494 NTRK1P04629 796 aa8.21□□□□□ -1.1
LINC00458-206ENST00000607494 ATP2B1P20020 1258 aa8.21□□□□□ -1.1
LINC00458-206ENST00000607494 GJA8P48165 433 aa8.21□□□□□ -1.1
LINC00458-206ENST00000607494 GRB10Q13322 594 aa8.21□□□□□ -1.1
LINC00458-206ENST00000607494 VHLLQ6RSH7 139 aa8.21□□□□□ -1.1
LINC00458-206ENST00000607494 DPH6Q7L8W6 267 aa8.21□□□□□ -1.1
LINC00458-206ENST00000607494 CARFQ8N187 725 aa8.21□□□□□ -1.1
LINC00458-206ENST00000607494 DDX1Q92499 740 aaKnown RBP8.21□□□□□ -1.1
LINC00458-206ENST00000607494 ANAPC16Q96DE5 110 aa8.21□□□□□ -1.1
LINC00458-206ENST00000607494 DDX11Q96FC9 970 aa8.21□□□□□ -1.1
LINC00458-206ENST00000607494 RCC1LQ96I51 464 aaKnown RBP8.21□□□□□ -1.1
LINC00458-206ENST00000607494 GMLQ99445 158 aa8.21□□□□□ -1.1
LINC00458-206ENST00000607494 GPRC5CQ9NQ84 441 aa8.21□□□□□ -1.1
LINC00458-206ENST00000607494 SPATA6Q9NWH7 488 aaPredicted RBP8.21□□□□□ -1.1
LINC00458-206ENST00000607494 FUCA1P04066 466 aa8.2□□□□□ -1.1
LINC00458-206ENST00000607494 ADRB1P08588 477 aa8.2□□□□□ -1.1
LINC00458-206ENST00000607494 PLS3P13797 630 aa8.2□□□□□ -1.1
LINC00458-206ENST00000607494 SCRN1Q12765 414 aa8.2□□□□□ -1.1
LINC00458-206ENST00000607494 EFEMP1Q12805 493 aa8.2□□□□□ -1.1
LINC00458-206ENST00000607494 SMAD4Q13485 552 aaKnown RBP8.2□□□□□ -1.1
LINC00458-206ENST00000607494 UBXN11Q5T124 520 aa8.2□□□□□ -1.1
LINC00458-206ENST00000607494 ERICH6BQ5W0A0 696 aa8.2□□□□□ -1.1
LINC00458-206ENST00000607494 USP33Q8TEY7 942 aa8.2□□□□□ -1.1
LINC00458-206ENST00000607494 ARMC5Q96C12 935 aa8.2□□□□□ -1.1
LINC00458-206ENST00000607494 PEX11GQ96HA9 241 aa8.2□□□□□ -1.1
LINC00458-206ENST00000607494 AKT3Q9Y243 479 aa8.2□□□□□ -1.1
LINC00458-206ENST00000607494 CADPSQ9ULU8 1353 aa8.2□□□□□ -1.1
LINC00458-206ENST00000607494 C8BP07358 591 aa8.19□□□□□ -1.1
LINC00458-206ENST00000607494 CNR2P34972 360 aa8.19□□□□□ -1.1
LINC00458-206ENST00000607494 DBX2Q6ZNG2 339 aa8.19□□□□□ -1.1
LINC00458-206ENST00000607494 DPF3Q92784 378 aa8.19□□□□□ -1.1
LINC00458-206ENST00000607494 ZBTB8AQ96BR9 441 aa8.19□□□□□ -1.1
LINC00458-206ENST00000607494 BTG4Q9NY30 223 aa8.19□□□□□ -1.1
LINC00458-206ENST00000607494 MARCH2Q9P0N8 246 aa8.19□□□□□ -1.1
LINC00458-206ENST00000607494 NUDT5Q9UKK9 219 aa8.19□□□□□ -1.1
LINC00458-206ENST00000607494 NOBOXO60393 691 aa8.18□□□□□ -1.1
LINC00458-206ENST00000607494 CACNB2Q08289 660 aaPredicted RBP8.18□□□□□ -1.1
LINC00458-206ENST00000607494 TEX2Q8IWB9 1127 aa8.18□□□□□ -1.1
LINC00458-206ENST00000607494 PPP1R14AQ96A00 147 aa8.18□□□□□ -1.1
LINC00458-206ENST00000607494 SEC16BQ96JE7 1060 aa8.18□□□□□ -1.1
LINC00458-206ENST00000607494 DNAJC2Q99543 621 aaKnown RBP8.18□□□□□ -1.1
LINC00458-206ENST00000607494 ANKRD34BA5PLL1 514 aa8.17□□□□□ -1.1
LINC00458-206ENST00000607494 NPHS1O60500 1241 aa8.17□□□□□ -1.1
LINC00458-206ENST00000607494 THBDP07204 575 aa8.17□□□□□ -1.1
LINC00458-206ENST00000607494 CDK11BP21127 795 aaKnown RBP8.17□□□□□ -1.1
LINC00458-206ENST00000607494 CYP4F3Q08477 520 aa8.17□□□□□ -1.1
LINC00458-206ENST00000607494 INF2Q27J81 1249 aa8.17□□□□□ -1.1
LINC00458-206ENST00000607494 ZFYVE27Q5T4F4 411 aa8.17□□□□□ -1.1
LINC00458-206ENST00000607494 FAM26EQ8N5C1 309 aa8.17□□□□□ -1.1
LINC00458-206ENST00000607494 PLEKHO2Q8TD55 490 aa8.17□□□□□ -1.1
LINC00458-206ENST00000607494 CPA5Q8WXQ8 436 aa8.17□□□□□ -1.1
LINC00458-206ENST00000607494 COPS5Q92905 334 aa8.17□□□□□ -1.1
LINC00458-206ENST00000607494 GORASP1Q9BQQ3 440 aa8.17□□□□□ -1.1
LINC00458-206ENST00000607494 CDK11AQ9UQ88 783 aaPredicted RBP8.17□□□□□ -1.1
LINC00458-206ENST00000607494 EMC9Q9Y3B6 208 aa8.17□□□□□ -1.1
LINC00458-206ENST00000607494 DNAJA1P31689 397 aaKnown RBP8.16□□□□□ -1.1
LINC00458-206ENST00000607494 GTF2F1P35269 517 aaKnown RBP eCLIP8.16□□□□□ -1.1
LINC00458-206ENST00000607494 CASP7P55210 303 aa8.16□□□□□ -1.1
LINC00458-206ENST00000607494 ARID5AQ03989 594 aa8.16□□□□□ -1.1
LINC00458-206ENST00000607494 SLC9A5Q14940 896 aa8.16□□□□□ -1.1
LINC00458-206ENST00000607494 STK32CQ86UX6 486 aa8.16□□□□□ -1.1
LINC00458-206ENST00000607494 APBA2Q99767 749 aa8.16□□□□□ -1.1
LINC00458-206ENST00000607494 LNPKQ9C0E8 428 aa8.16□□□□□ -1.1
LINC00458-206ENST00000607494 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.16□□□□□ -1.1
LINC00458-206ENST00000607494 FPR2P25090 351 aa8.15□□□□□ -1.1
LINC00458-206ENST00000607494 SPATS1Q496A3 300 aa8.15□□□□□ -1.1
LINC00458-206ENST00000607494 GIMAP6Q6P9H5 292 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms