RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 PHLPP1O60346 1717 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 SPATA31A6Q5VVP1 1343 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 GOLGA6L7A0A1B0GV03 622 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 USP17L15C9J2P7 530 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 USP17L13C9JLJ4 530 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 USP17L11C9JVI0 530 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 USP17L18D6R9N7 530 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 USP17L22D6RA61 530 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 USP17L17D6RBQ6 530 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 USP17L19D6RCP7 530 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 USP17L20D6RJB6 530 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 HEXIM1O94992 359 aaKnown RBP7.17□□□□□ -1.26
RPF2-204ENST00000607388 KRT13P13646 458 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 RXRBP28702 533 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 CARSP49589 748 aaKnown RBP7.17□□□□□ -1.26
RPF2-204ENST00000607388 KIF11P52732 1056 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 USP17L24Q0WX57 530 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 TBX2Q13207 712 aaPredicted RBP7.17□□□□□ -1.26
RPF2-204ENST00000607388 USP17L6PQ6QN14 398 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 LRRC31Q6UY01 552 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 EXOC4Q96A65 974 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 GJD4Q96KN9 370 aaPredicted RBP7.17□□□□□ -1.26
RPF2-204ENST00000607388 EYA3Q99504 573 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 CAPS2Q9BXY5 557 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 IKZF4Q9H2S9 585 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 MINPP1Q9UNW1 487 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 E9PMD0 336 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 IVLP07476 585 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 VAV2P52735 878 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 HERVK_113P62684 666 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 PABPC4Q13310 644 aaKnown RBP eCLIP7.17□□□□□ -1.265e-6■□□□□ 10.8
RPF2-204ENST00000607388 DOK7Q18PE1 504 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 WHAMMP3Q1A5X7 153 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 CT47A1Q5JQC4 288 aaPredicted RBP7.17□□□□□ -1.26
RPF2-204ENST00000607388 TTBK2Q6IQ55 1244 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 NUDT12Q9BQG2 462 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 PACSIN1Q9BY11 444 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 HAUS4Q9H6D7 363 aa7.17□□□□□ -1.26
RPF2-204ENST00000607388 USP17L5A8MUK1 530 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 POTEB2H3BUK9 544 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 H7C1D1 291 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 ERLIN2O94905 339 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 RPSAP08865 295 aaKnown RBP7.16□□□□□ -1.26
RPF2-204ENST00000607388 INPP5BP32019 993 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 ARHGAP25P42331 645 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 ITPK1Q13572 414 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 CALCRLQ16602 461 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 KRT79Q5XKE5 535 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 CAPN12Q6ZSI9 719 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 TRIML1Q8N9V2 468 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 CTNNBL1Q8WYA6 563 aaPredicted RBP7.16□□□□□ -1.26
RPF2-204ENST00000607388 P2RX5Q93086 422 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 PHF20Q9BVI0 1012 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 DDX47Q9H0S4 455 aaKnown RBP7.16□□□□□ -1.26
RPF2-204ENST00000607388 RBM12Q9NTZ6 932 aaKnown RBP7.16□□□□□ -1.26
RPF2-204ENST00000607388 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.16□□□□□ -1.267e-7■■■■□ 23.9
RPF2-204ENST00000607388 KIAA1024Q9UPX6 916 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 REXO2Q9Y3B8 237 aaKnown RBP7.16□□□□□ -1.26
RPF2-204ENST00000607388 LRP6O75581 1613 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 MYO1FO00160 1098 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 PRPF3O43395 683 aaKnown RBP7.16□□□□□ -1.26
RPF2-204ENST00000607388 LRRN2O75325 713 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 TMOD1P28289 359 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 DNM2P50570 870 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 GTF2IP78347 998 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 KLHL30Q0D2K2 578 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 NFIXQ14938 502 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 PAIP2Q9BPZ3 127 aaKnown RBP7.16□□□□□ -1.26
RPF2-204ENST00000607388 JPH2Q9BR39 696 aaPredicted RBP7.16□□□□□ -1.26
RPF2-204ENST00000607388 RGS17Q9UGC6 210 aaPredicted RBP7.16□□□□□ -1.26
RPF2-204ENST00000607388 RWDD2AQ9UIY3 292 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.16□□□□□ -1.26
RPF2-204ENST00000607388 PCDHA13Q9Y5I0 950 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 PDE4DIPQ5VU43 2346 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 LOC102724159A0A0B4J2E5 919 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 UFL1O94874 794 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 FAM153BP0C7A2 387 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 CALML3P27482 149 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 USP14P54578 494 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 CKAP4Q07065 602 aaKnown RBP7.16□□□□□ -1.26
RPF2-204ENST00000607388 ZNF211Q13398 564 aaPredicted RBP7.16□□□□□ -1.26
RPF2-204ENST00000607388 NONOQ15233 471 aaKnown RBP eCLIP7.16□□□□□ -1.26
RPF2-204ENST00000607388 PWP2Q15269 919 aaKnown RBP7.16□□□□□ -1.26
RPF2-204ENST00000607388 TMEM266Q2M3C6 531 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 FAM153CQ494X1 144 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 TBC1D9BQ66K14 1250 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 PACS2Q86VP3 889 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 REXO1Q8N1G1 1221 aaKnown RBP7.16□□□□□ -1.26
RPF2-204ENST00000607388 FAM71BQ8TC56 605 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 TBC1D31Q96DN5 1066 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 TMEM47Q9BQJ4 181 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 BCAS3Q9H6U6 928 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 FAM153AQ9UHL3 310 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 JRKLQ9Y4A0 524 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 MON2Q7Z3U7 1717 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 NCAPD2Q15021 1401 aa7.16□□□□□ -1.26
RPF2-204ENST00000607388 PALMO75781 387 aa7.15□□□□□ -1.26
RPF2-204ENST00000607388 OR52Z1P0C646 297 aa7.15□□□□□ -1.26
RPF2-204ENST00000607388 RDXP35241 583 aaKnown RBP7.15□□□□□ -1.26
RPF2-204ENST00000607388 SARSP49591 514 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms