RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 CCDC155Q8N6L0 562 aa17.69■□□□□ 0.42
SSBP4-214ENST00000607020 CHMP4CQ96CF2 233 aa17.69■□□□□ 0.42
SSBP4-214ENST00000607020 CTAGE1Q96RT6 745 aa17.69■□□□□ 0.42
SSBP4-214ENST00000607020 MPHOSPH6Q99547 160 aaKnown RBP17.69■□□□□ 0.42
SSBP4-214ENST00000607020 ANAPC4Q9UJX5 808 aa17.69■□□□□ 0.42
SSBP4-214ENST00000607020 TCF20Q9UGU0 1960 aaKnown RBP17.68■□□□□ 0.42
SSBP4-214ENST00000607020 PTPDC1A2A3K4 754 aa17.68■□□□□ 0.42
SSBP4-214ENST00000607020 CXCL10P02778 98 aa17.68■□□□□ 0.42
SSBP4-214ENST00000607020 SLC16A2P36021 539 aa17.68■□□□□ 0.42
SSBP4-214ENST00000607020 ERVK-21P61565 698 aa17.68■□□□□ 0.42
SSBP4-214ENST00000607020 PDE4DQ08499 809 aa17.68■□□□□ 0.42
SSBP4-214ENST00000607020 LEXMQ3ZCV2 418 aa17.68■□□□□ 0.42
SSBP4-214ENST00000607020 TTBK2Q6IQ55 1244 aa17.68■□□□□ 0.42
SSBP4-214ENST00000607020 RNF207Q6ZRF8 634 aa17.68■□□□□ 0.42
SSBP4-214ENST00000607020 RASGRP2Q7LDG7 609 aa17.68■□□□□ 0.42
SSBP4-214ENST00000607020 SPRED2Q7Z698 418 aa17.68■□□□□ 0.42
SSBP4-214ENST00000607020 RGS22Q8NE09 1264 aa17.68■□□□□ 0.42
SSBP4-214ENST00000607020 YTHDC1Q96MU7 727 aaKnown RBP17.68■□□□□ 0.42
SSBP4-214ENST00000607020 RAD9AQ99638 391 aa17.68■□□□□ 0.42
SSBP4-214ENST00000607020 MAF1Q9H063 256 aa17.68■□□□□ 0.42
SSBP4-214ENST00000607020 SUGCTQ9HAC7 445 aa17.68■□□□□ 0.42
SSBP4-214ENST00000607020 NOD1Q9Y239 953 aa17.68■□□□□ 0.42
SSBP4-214ENST00000607020 ABHD14A-ACY1A0A1B0GW23 586 aa17.67■□□□□ 0.42
SSBP4-214ENST00000607020 LCHNA4D1U4 455 aa17.67■□□□□ 0.42
SSBP4-214ENST00000607020 PRR33A8MZF0 331 aa17.67■□□□□ 0.42
SSBP4-214ENST00000607020 B4DLN1 442 aa17.67■□□□□ 0.42
SSBP4-214ENST00000607020 FOXP2O15409 715 aa17.67■□□□□ 0.42
SSBP4-214ENST00000607020 ORC4O43929 436 aa17.67■□□□□ 0.42
SSBP4-214ENST00000607020 TXNP10599 105 aaKnown RBP17.67■□□□□ 0.42
SSBP4-214ENST00000607020 SELPP16109 830 aa17.67■□□□□ 0.42
SSBP4-214ENST00000607020 MRPL12P52815 198 aaKnown RBP17.67■□□□□ 0.42
SSBP4-214ENST00000607020 RPS6P62753 249 aaKnown RBP17.67■□□□□ 0.42
SSBP4-214ENST00000607020 PTGISQ16647 500 aa17.67■□□□□ 0.42
SSBP4-214ENST00000607020 CCDC96Q2M329 555 aa17.67■□□□□ 0.42
SSBP4-214ENST00000607020 TSHZ3Q63HK5 1081 aa17.67■□□□□ 0.42
SSBP4-214ENST00000607020 CCDC62Q6P9F0 684 aa17.67■□□□□ 0.42
SSBP4-214ENST00000607020 CNKSR3Q6P9H4 555 aa17.67■□□□□ 0.42
SSBP4-214ENST00000607020 SLC30A10Q6XR72 485 aa17.67■□□□□ 0.42
SSBP4-214ENST00000607020 FAM178BQ8IXR5 827 aa17.67■□□□□ 0.42
SSBP4-214ENST00000607020 COPS5Q92905 334 aa17.67■□□□□ 0.42
SSBP4-214ENST00000607020 INCENPQ9NQS7 918 aa17.67■□□□□ 0.42
SSBP4-214ENST00000607020 EFCAB14O75071 495 aa17.66■□□□□ 0.42
SSBP4-214ENST00000607020 GJB5O95377 273 aa17.66■□□□□ 0.42
SSBP4-214ENST00000607020 CALML3P27482 149 aa17.66■□□□□ 0.42
SSBP4-214ENST00000607020 TGS1Q96RS0 853 aaKnown RBP17.66■□□□□ 0.42
SSBP4-214ENST00000607020 ZBED2Q9BTP6 218 aa17.66■□□□□ 0.42
SSBP4-214ENST00000607020 UBE2ZQ9H832 354 aaPredicted RBP17.66■□□□□ 0.42
SSBP4-214ENST00000607020 TCP11L1Q9NUJ3 509 aa17.66■□□□□ 0.42
SSBP4-214ENST00000607020 LRRC37A2A6NM11 1700 aa17.66■□□□□ 0.42
SSBP4-214ENST00000607020 TTC41PQ6P2S7 1318 aa17.66■□□□□ 0.42
SSBP4-214ENST00000607020 WDR19Q8NEZ3 1342 aa17.66■□□□□ 0.42
SSBP4-214ENST00000607020 MUC6Q6W4X9 2439 aa17.66■□□□□ 0.42
SSBP4-214ENST00000607020 GBF1Q92538 1859 aa17.65■□□□□ 0.42
SSBP4-214ENST00000607020 FAM86C2PA6NEL3 165 aa17.65■□□□□ 0.42
SSBP4-214ENST00000607020 RANBP6O60518 1105 aaKnown RBP17.65■□□□□ 0.42
SSBP4-214ENST00000607020 TOP1P11387 765 aaKnown RBP17.65■□□□□ 0.42
SSBP4-214ENST00000607020 CTDSPL2Q05D32 466 aa17.65■□□□□ 0.42
SSBP4-214ENST00000607020 GDF6Q6KF10 455 aaPredicted RBP17.65■□□□□ 0.42
SSBP4-214ENST00000607020 LRRC8DQ7L1W4 858 aa17.65■□□□□ 0.42
SSBP4-214ENST00000607020 GJD3Q8N144 294 aa17.65■□□□□ 0.42
SSBP4-214ENST00000607020 GDPD5Q8WTR4 605 aa17.65■□□□□ 0.42
SSBP4-214ENST00000607020 PPP1R13LQ8WUF5 828 aa17.65■□□□□ 0.42
SSBP4-214ENST00000607020 DHX38Q92620 1227 aaKnown RBP17.65■□□□□ 0.42
SSBP4-214ENST00000607020 KAT2BQ92831 832 aa17.65■□□□□ 0.42
SSBP4-214ENST00000607020 SCN10AQ9Y5Y9 1956 aa17.65■□□□□ 0.42
SSBP4-214ENST00000607020 LINC01553A4QN01 128 aa17.64■□□□□ 0.41
SSBP4-214ENST00000607020 NBNO60934 754 aa17.64■□□□□ 0.41
SSBP4-214ENST00000607020 ARIH2O95376 493 aa17.64■□□□□ 0.41
SSBP4-214ENST00000607020 DEFB103AP81534 67 aa17.64■□□□□ 0.41
SSBP4-214ENST00000607020 ALX1Q15699 326 aa17.64■□□□□ 0.41
SSBP4-214ENST00000607020 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.64■□□□□ 0.41
SSBP4-214ENST00000607020 PI4K2BQ8TCG2 481 aa17.64■□□□□ 0.41
SSBP4-214ENST00000607020 TMEM47Q9BQJ4 181 aa17.64■□□□□ 0.41
SSBP4-214ENST00000607020 MYH4Q9Y623 1939 aa17.63■□□□□ 0.41
SSBP4-214ENST00000607020 PDHBP11177 359 aa17.63■□□□□ 0.41
SSBP4-214ENST00000607020 CKBP12277 381 aa17.63■□□□□ 0.41
SSBP4-214ENST00000607020 ALADP13716 330 aa17.63■□□□□ 0.41
SSBP4-214ENST00000607020 PUS10Q3MIT2 529 aaKnown RBP17.63■□□□□ 0.41
SSBP4-214ENST00000607020 TMCO2Q7Z6W1 182 aaPredicted RBP17.63■□□□□ 0.41
SSBP4-214ENST00000607020 AFG1LQ8WV93 481 aa17.63■□□□□ 0.41
SSBP4-214ENST00000607020 MTMR7Q9Y216 660 aa17.63■□□□□ 0.41
SSBP4-214ENST00000607020 MYH7P12883 1935 aa17.62■□□□□ 0.41
SSBP4-214ENST00000607020 GH1P01241 217 aa17.62■□□□□ 0.41
SSBP4-214ENST00000607020 MMP3P08254 477 aa17.62■□□□□ 0.41
SSBP4-214ENST00000607020 SNHG28P0DPA3 235 aa17.62■□□□□ 0.41
SSBP4-214ENST00000607020 CASTP20810 708 aaKnown RBP17.62■□□□□ 0.41
SSBP4-214ENST00000607020 ZNF543Q08ER8 600 aa17.62■□□□□ 0.41
SSBP4-214ENST00000607020 IKBKEQ14164 716 aa17.62■□□□□ 0.41
SSBP4-214ENST00000607020 TTC14Q96N46 770 aa17.62■□□□□ 0.41
SSBP4-214ENST00000607020 FSD1Q9BTV5 496 aa17.62■□□□□ 0.41
SSBP4-214ENST00000607020 GPCPD1Q9NPB8 672 aa17.62■□□□□ 0.41
SSBP4-214ENST00000607020 GTF2IRD1Q9UHL9 959 aa17.62■□□□□ 0.41
SSBP4-214ENST00000607020 GRXCR2A6NFK2 248 aa17.61■□□□□ 0.41
SSBP4-214ENST00000607020 ARHGAP1Q07960 439 aa17.61■□□□□ 0.41
SSBP4-214ENST00000607020 PTK7Q13308 1070 aa17.61■□□□□ 0.41
SSBP4-214ENST00000607020 TCTN1Q2MV58 587 aa17.61■□□□□ 0.41
SSBP4-214ENST00000607020 TRIM71Q2Q1W2 868 aaKnown RBP17.61■□□□□ 0.41
SSBP4-214ENST00000607020 TRAF7Q6Q0C0 670 aa17.61■□□□□ 0.41
SSBP4-214ENST00000607020 ALYREFQ86V81 257 aaKnown RBP17.61■□□□□ 0.41
SSBP4-214ENST00000607020 NEK9Q8TD19 979 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms