RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 MCF2L2Q86YR7 1114 aa14.26□□□□□ -0.13
CTSA-210ENST00000606000 SRBD1Q8N5C6 995 aaKnown RBP14.26□□□□□ -0.13
CTSA-210ENST00000606000 OR6J1Q8NGC5 347 aa14.26□□□□□ -0.13
CTSA-210ENST00000606000 IL31RAQ8NI17 732 aa14.26□□□□□ -0.13
CTSA-210ENST00000606000 CTCFLQ8NI51 663 aaPredicted RBP14.26□□□□□ -0.13
CTSA-210ENST00000606000 PPP1R13LQ8WUF5 828 aa14.26□□□□□ -0.13
CTSA-210ENST00000606000 BADQ92934 168 aa14.26□□□□□ -0.13
CTSA-210ENST00000606000 VTI1AQ96AJ9 217 aa14.26□□□□□ -0.13
CTSA-210ENST00000606000 ZFP91Q96JP5 570 aaPredicted RBP14.26□□□□□ -0.13
CTSA-210ENST00000606000 RMDN3Q96TC7 470 aa14.26□□□□□ -0.13
CTSA-210ENST00000606000 MTA3Q9BTC8 594 aa14.26□□□□□ -0.13
CTSA-210ENST00000606000 DNAH12Q6ZR08 3092 aa14.26□□□□□ -0.13
CTSA-210ENST00000606000 GRIN2DO15399 1336 aa14.25□□□□□ -0.13
CTSA-210ENST00000606000 ELP1O95163 1332 aa14.25□□□□□ -0.13
CTSA-210ENST00000606000 PNMA6FA0A0J9YX94 578 aa14.25□□□□□ -0.13
CTSA-210ENST00000606000 A0A0U1RQG5 324 aaPredicted RBP14.25□□□□□ -0.13
CTSA-210ENST00000606000 A0A1W2PPC1 479 aa14.25□□□□□ -0.13
CTSA-210ENST00000606000 hCG_1642624A0A1W2PR95 340 aa14.25□□□□□ -0.13
CTSA-210ENST00000606000 GHRHRQ02643 423 aa14.25□□□□□ -0.13
CTSA-210ENST00000606000 PPP2R5BQ15173 497 aa14.25□□□□□ -0.13
CTSA-210ENST00000606000 ARHGEF16Q5VV41 709 aa14.25□□□□□ -0.13
CTSA-210ENST00000606000 SEPT14Q6ZU15 432 aa14.25□□□□□ -0.13
CTSA-210ENST00000606000 ANKRD33Q7Z3H0 272 aa14.25□□□□□ -0.13
CTSA-210ENST00000606000 MICU3Q86XE3 530 aa14.25□□□□□ -0.13
CTSA-210ENST00000606000 TDHQ8IZJ6 230 aa14.25□□□□□ -0.13
CTSA-210ENST00000606000 NSUN6Q8TEA1 469 aaKnown RBP14.25□□□□□ -0.13
CTSA-210ENST00000606000 LBHD1Q9BQE6 289 aaPredicted RBP14.25□□□□□ -0.13
CTSA-210ENST00000606000 SPZ1Q9BXG8 430 aa14.25□□□□□ -0.13
CTSA-210ENST00000606000 PXMP2Q9NR77 195 aa14.25□□□□□ -0.13
CTSA-210ENST00000606000 BRPF3Q9ULD4 1205 aa14.25□□□□□ -0.13
CTSA-210ENST00000606000 ARVCFO00192 962 aa14.24□□□□□ -0.13
CTSA-210ENST00000606000 TXNP10599 105 aaKnown RBP14.24□□□□□ -0.13
CTSA-210ENST00000606000 LIFRP42702 1097 aa14.24□□□□□ -0.13
CTSA-210ENST00000606000 CDK7P50613 346 aa14.24□□□□□ -0.13
CTSA-210ENST00000606000 EXOSC10Q01780 885 aaKnown RBP14.24□□□□□ -0.13
CTSA-210ENST00000606000 FCHSD1Q86WN1 690 aa14.24□□□□□ -0.13
CTSA-210ENST00000606000 FAM126BQ8IXS8 530 aa14.24□□□□□ -0.13
CTSA-210ENST00000606000 CCDC82Q8N4S0 544 aa14.24□□□□□ -0.13
CTSA-210ENST00000606000 SCFD2Q8WU76 684 aa14.24□□□□□ -0.13
CTSA-210ENST00000606000 MPHOSPH6Q99547 160 aaKnown RBP14.24□□□□□ -0.13
CTSA-210ENST00000606000 MAP3K14Q99558 947 aa14.24□□□□□ -0.13
CTSA-210ENST00000606000 Q9Y3F1 56 aa14.24□□□□□ -0.13
CTSA-210ENST00000606000 SLC12A7Q9Y666 1083 aa14.24□□□□□ -0.13
CTSA-210ENST00000606000 CEP290O15078 2479 aa14.24□□□□□ -0.13
CTSA-210ENST00000606000 NR3C2P08235 984 aa14.23□□□□□ -0.13
CTSA-210ENST00000606000 MYL3P08590 195 aa14.23□□□□□ -0.13
CTSA-210ENST00000606000 MYCLP12524 364 aaPredicted RBP14.23□□□□□ -0.13
CTSA-210ENST00000606000 KIF5BP33176 963 aa14.23□□□□□ -0.13
CTSA-210ENST00000606000 HSPA4P34932 840 aa14.23□□□□□ -0.13
CTSA-210ENST00000606000 EPHB4P54760 987 aa14.23□□□□□ -0.13
CTSA-210ENST00000606000 LY6KQ17RY6 165 aa14.23□□□□□ -0.13
CTSA-210ENST00000606000 TSGA10IPQ3SY00 556 aa14.23□□□□□ -0.13
CTSA-210ENST00000606000 C9orf50Q5SZB4 431 aa14.23□□□□□ -0.13
CTSA-210ENST00000606000 CCDC62Q6P9F0 684 aa14.23□□□□□ -0.13
CTSA-210ENST00000606000 APOA5Q6Q788 366 aa14.23□□□□□ -0.13
CTSA-210ENST00000606000 DHX32Q7L7V1 743 aaKnown RBP14.23□□□□□ -0.13
CTSA-210ENST00000606000 SGMS1Q86VZ5 419 aa14.23□□□□□ -0.13
CTSA-210ENST00000606000 TMTC2Q8N394 836 aa14.23□□□□□ -0.13
CTSA-210ENST00000606000 RRP36Q96EU6 259 aaKnown RBP14.23□□□□□ -0.13
CTSA-210ENST00000606000 PDCD2LQ9BRP1 358 aa14.23□□□□□ -0.13
CTSA-210ENST00000606000 TMEM39AQ9NV64 488 aa14.23□□□□□ -0.13
CTSA-210ENST00000606000 PPP4R2Q9NY27 417 aa14.23□□□□□ -0.13
CTSA-210ENST00000606000 TBX21Q9UL17 535 aa14.23□□□□□ -0.13
CTSA-210ENST00000606000 SNX14Q9Y5W7 946 aa14.23□□□□□ -0.13
CTSA-210ENST00000606000 DCDC2CA8MYV0 355 aa14.22□□□□□ -0.13
CTSA-210ENST00000606000 GCOM1H8Y6P7 765 aaPredicted RBP14.22□□□□□ -0.13
CTSA-210ENST00000606000 KIAA0355O15063 1070 aa14.22□□□□□ -0.13
CTSA-210ENST00000606000 SORBS3O60504 671 aa14.22□□□□□ -0.13
CTSA-210ENST00000606000 RGS20O76081 388 aa14.22□□□□□ -0.13
CTSA-210ENST00000606000 POLR2MP0CAP2 368 aa14.22□□□□□ -0.13
CTSA-210ENST00000606000 PURAQ00577 322 aaKnown RBP14.22□□□□□ -0.13
CTSA-210ENST00000606000 ITGA7Q13683 1181 aa14.22□□□□□ -0.13
CTSA-210ENST00000606000 TTLL4Q14679 1199 aa14.22□□□□□ -0.13
CTSA-210ENST00000606000 PGM5Q15124 567 aa14.22□□□□□ -0.13
CTSA-210ENST00000606000 STXBP2Q15833 593 aa14.22□□□□□ -0.13
CTSA-210ENST00000606000 TMTC3Q6ZXV5 915 aa14.22□□□□□ -0.13
CTSA-210ENST00000606000 FANCBQ8NB91 859 aa14.22□□□□□ -0.13
CTSA-210ENST00000606000 SLC43A3Q8NBI5 491 aa14.22□□□□□ -0.13
CTSA-210ENST00000606000 GPKOWQ92917 476 aaPredicted RBP eCLIP14.22□□□□□ -0.13
CTSA-210ENST00000606000 KCNB2Q92953 911 aa14.22□□□□□ -0.13
CTSA-210ENST00000606000 JAKMIP1Q96N16 626 aaKnown RBP14.22□□□□□ -0.13
CTSA-210ENST00000606000 TOX2Q96NM4 488 aa14.22□□□□□ -0.13
CTSA-210ENST00000606000 IWS1Q96ST2 819 aa14.22□□□□□ -0.13
CTSA-210ENST00000606000 PPP1R12CQ9BZL4 782 aa14.22□□□□□ -0.13
CTSA-210ENST00000606000 MAF1Q9H063 256 aa14.22□□□□□ -0.13
CTSA-210ENST00000606000 DOCK5Q9H7D0 1870 aa14.22□□□□□ -0.13
CTSA-210ENST00000606000 CNTNAP5Q8WYK1 1306 aa14.21□□□□□ -0.13
CTSA-210ENST00000606000 B4DLN1 442 aa14.21□□□□□ -0.13
CTSA-210ENST00000606000 ZEB2O60315 1214 aa14.21□□□□□ -0.13
CTSA-210ENST00000606000 CALM1P0DP23 149 aa14.21□□□□□ -0.13
CTSA-210ENST00000606000 CALM2P0DP24 149 aa14.21□□□□□ -0.13
CTSA-210ENST00000606000 CALM3P0DP25 149 aa14.21□□□□□ -0.13
CTSA-210ENST00000606000 RAG1P15918 1043 aa14.21□□□□□ -0.13
CTSA-210ENST00000606000 CPT1AP50416 773 aa14.21□□□□□ -0.13
CTSA-210ENST00000606000 MRPL12P52815 198 aaKnown RBP14.21□□□□□ -0.13
CTSA-210ENST00000606000 ARHGAP1Q07960 439 aa14.21□□□□□ -0.13
CTSA-210ENST00000606000 SHHQ15465 462 aa14.21□□□□□ -0.13
CTSA-210ENST00000606000 USP17L6PQ6QN14 398 aa14.21□□□□□ -0.13
CTSA-210ENST00000606000 SEC63Q9UGP8 760 aaKnown RBP14.21□□□□□ -0.13
CTSA-210ENST00000606000 TRIOBPQ9H2D6 2365 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms