RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 SV2BQ7L1I2 683 aa16.9■□□□□ 0.3
CCDC12-211ENST00000604367 LARP4BQ92615 738 aaKnown RBP16.9■□□□□ 0.3
CCDC12-211ENST00000604367 CTAGE1Q96RT6 745 aa16.9■□□□□ 0.3
CCDC12-211ENST00000604367 C7orf25Q9BPX7 421 aa16.9■□□□□ 0.3
CCDC12-211ENST00000604367 EXOC1Q9NV70 894 aa16.9■□□□□ 0.3
CCDC12-211ENST00000604367 FCER1AP12319 257 aa16.9■□□□□ 0.3
CCDC12-211ENST00000604367 STK4Q13043 487 aa16.9■□□□□ 0.3
CCDC12-211ENST00000604367 KRT31Q15323 416 aa16.9■□□□□ 0.3
CCDC12-211ENST00000604367 PTPN14Q15678 1187 aa16.9■□□□□ 0.3
CCDC12-211ENST00000604367 FILIP1LQ4L180 1135 aa16.9■□□□□ 0.3
CCDC12-211ENST00000604367 DYMQ7RTS9 669 aa16.9■□□□□ 0.3
CCDC12-211ENST00000604367 GLIS2Q9BZE0 524 aaPredicted RBP16.9■□□□□ 0.3
CCDC12-211ENST00000604367 VPS16Q9H269 839 aa16.9■□□□□ 0.3
CCDC12-211ENST00000604367 GOPCQ9HD26 462 aa16.9■□□□□ 0.3
CCDC12-211ENST00000604367 SMCHD1A6NHR9 2005 aa16.9■□□□□ 0.3
CCDC12-211ENST00000604367 SPDYE3A6NKU9 549 aa16.89■□□□□ 0.29
CCDC12-211ENST00000604367 EGFRP00533 1210 aa16.89■□□□□ 0.29
CCDC12-211ENST00000604367 STIM1Q13586 685 aa16.89■□□□□ 0.29
CCDC12-211ENST00000604367 BTNL9Q6UXG8 535 aa16.89■□□□□ 0.29
CCDC12-211ENST00000604367 KCNK18Q7Z418 384 aa16.89■□□□□ 0.29
CCDC12-211ENST00000604367 FAM83AQ86UY5 434 aa16.89■□□□□ 0.29
CCDC12-211ENST00000604367 MTMR14Q8NCE2 650 aa16.89■□□□□ 0.29
CCDC12-211ENST00000604367 MYRIPQ8NFW9 859 aa16.89■□□□□ 0.29
CCDC12-211ENST00000604367 CCDC47Q96A33 483 aaKnown RBP16.89■□□□□ 0.29
CCDC12-211ENST00000604367 EEF2KMTQ96G04 330 aa16.89■□□□□ 0.29
CCDC12-211ENST00000604367 TAB2Q9NYJ8 693 aa16.89■□□□□ 0.29
CCDC12-211ENST00000604367 BCS1LQ9Y276 419 aa16.89■□□□□ 0.29
CCDC12-211ENST00000604367 NFKBIEO00221 500 aa16.89■□□□□ 0.29
CCDC12-211ENST00000604367 PSMA7O14818 248 aa16.89■□□□□ 0.29
CCDC12-211ENST00000604367 ARHGAP4P98171 946 aa16.89■□□□□ 0.29
CCDC12-211ENST00000604367 ECM1Q16610 540 aa16.89■□□□□ 0.29
CCDC12-211ENST00000604367 FKBP1CQ5VVH2 108 aa16.89■□□□□ 0.29
CCDC12-211ENST00000604367 TC2NQ8N9U0 490 aa16.89■□□□□ 0.29
CCDC12-211ENST00000604367 CCDC112Q8NEF3 446 aa16.89■□□□□ 0.29
CCDC12-211ENST00000604367 CPLX3Q8WVH0 158 aa16.89■□□□□ 0.29
CCDC12-211ENST00000604367 KIFC2Q96AC6 838 aa16.89■□□□□ 0.29
CCDC12-211ENST00000604367 KCNJ18B7U540 433 aa16.88■□□□□ 0.29
CCDC12-211ENST00000604367 RIOK3O14730 519 aaKnown RBP16.88■□□□□ 0.29
CCDC12-211ENST00000604367 N4BP3O15049 544 aa16.88■□□□□ 0.29
CCDC12-211ENST00000604367 CAP2P40123 477 aa16.88■□□□□ 0.29
CCDC12-211ENST00000604367 USP11P51784 963 aa16.88■□□□□ 0.29
CCDC12-211ENST00000604367 AP3B2Q13367 1082 aa16.88■□□□□ 0.29
CCDC12-211ENST00000604367 KCNJ12Q14500 433 aa16.88■□□□□ 0.29
CCDC12-211ENST00000604367 PRR16Q569H4 304 aa16.88■□□□□ 0.29
CCDC12-211ENST00000604367 TCP11X2Q5H9J9 407 aa16.88■□□□□ 0.29
CCDC12-211ENST00000604367 CEP135Q66GS9 1140 aa16.88■□□□□ 0.29
CCDC12-211ENST00000604367 CCDC174Q6PII3 467 aa16.88■□□□□ 0.29
CCDC12-211ENST00000604367 TRIM47Q96LD4 638 aa16.88■□□□□ 0.29
CCDC12-211ENST00000604367 MTFR1LQ9H019 292 aa16.88■□□□□ 0.29
CCDC12-211ENST00000604367 TMX1Q9H3N1 280 aa16.88■□□□□ 0.29
CCDC12-211ENST00000604367 STK17AQ9UEE5 414 aa16.88■□□□□ 0.29
CCDC12-211ENST00000604367 MYMKA6NI61 221 aa16.88■□□□□ 0.29
CCDC12-211ENST00000604367 OPLAHO14841 1288 aa16.88■□□□□ 0.29
CCDC12-211ENST00000604367 NYAP1Q6ZVC0 841 aa16.88■□□□□ 0.29
CCDC12-211ENST00000604367 ANKRD20A12PQ8NF67 263 aa16.88■□□□□ 0.29
CCDC12-211ENST00000604367 ZBED3Q96IU2 234 aaPredicted RBP16.88■□□□□ 0.29
CCDC12-211ENST00000604367 PPP1R13BQ96KQ4 1090 aa16.88■□□□□ 0.29
CCDC12-211ENST00000604367 BAG1Q99933 345 aaPredicted RBP16.88■□□□□ 0.29
CCDC12-211ENST00000604367 H7C1D1 291 aa16.87■□□□□ 0.29
CCDC12-211ENST00000604367 TBC1D12O60347 775 aa16.87■□□□□ 0.29
CCDC12-211ENST00000604367 RASA3Q14644 834 aa16.87■□□□□ 0.29
CCDC12-211ENST00000604367 FCHSD1Q86WN1 690 aa16.87■□□□□ 0.29
CCDC12-211ENST00000604367 TSC1Q92574 1164 aa16.87■□□□□ 0.29
CCDC12-211ENST00000604367 RAD54LQ92698 747 aa16.87■□□□□ 0.29
CCDC12-211ENST00000604367 NAP1L4Q99733 375 aaKnown RBP16.87■□□□□ 0.29
CCDC12-211ENST00000604367 SLC39A2Q9NP94 309 aa16.87■□□□□ 0.29
CCDC12-211ENST00000604367 LIMA1Q9UHB6 759 aaKnown RBP16.87■□□□□ 0.29
CCDC12-211ENST00000604367 SYNPO2Q9UMS6 1093 aa16.87■□□□□ 0.29
CCDC12-211ENST00000604367 STAT3P40763 770 aa16.87■□□□□ 0.29
CCDC12-211ENST00000604367 COPB1P53618 953 aaKnown RBP16.87■□□□□ 0.29
CCDC12-211ENST00000604367 SPAG1Q07617 926 aa16.87■□□□□ 0.29
CCDC12-211ENST00000604367 RBL2Q08999 1139 aa16.87■□□□□ 0.29
CCDC12-211ENST00000604367 TMEM139Q8IV31 216 aa16.87■□□□□ 0.29
CCDC12-211ENST00000604367 SRRTQ9BXP5 876 aaKnown RBP16.87■□□□□ 0.29
CCDC12-211ENST00000604367 IDEP14735 1019 aa16.86■□□□□ 0.29
CCDC12-211ENST00000604367 R3HDM1Q15032 1099 aaKnown RBP16.86■□□□□ 0.29
CCDC12-211ENST00000604367 IRF2BP1Q8IU81 584 aa16.86■□□□□ 0.29
CCDC12-211ENST00000604367 KIAA0895Q8NCT3 520 aa16.86■□□□□ 0.29
CCDC12-211ENST00000604367 VCPKMTQ9H867 229 aa16.86■□□□□ 0.29
CCDC12-211ENST00000604367 KCNMB3Q9NPA1 279 aa16.86■□□□□ 0.29
CCDC12-211ENST00000604367 KCND1Q9NSA2 647 aa16.86■□□□□ 0.29
CCDC12-211ENST00000604367 PGAP2Q9UHJ9 254 aa16.86■□□□□ 0.29
CCDC12-211ENST00000604367 FAM86B1E9PN63 330 aa16.86■□□□□ 0.29
CCDC12-211ENST00000604367 CFBP00751 764 aa16.86■□□□□ 0.29
CCDC12-211ENST00000604367 SSBP05455 408 aaKnown RBP eCLIP16.86■□□□□ 0.29
CCDC12-211ENST00000604367 FAM86B2P0C5J1 330 aa16.86■□□□□ 0.29
CCDC12-211ENST00000604367 PBX1P40424 430 aa16.86■□□□□ 0.29
CCDC12-211ENST00000604367 TNIP1Q15025 636 aa16.86■□□□□ 0.29
CCDC12-211ENST00000604367 TMEM119Q4V9L6 283 aa16.86■□□□□ 0.29
CCDC12-211ENST00000604367 CNNM4Q6P4Q7 775 aa16.86■□□□□ 0.29
CCDC12-211ENST00000604367 PPFIBP1Q86W92 1011 aa16.86■□□□□ 0.29
CCDC12-211ENST00000604367 CRYGNQ8WXF5 182 aa16.86■□□□□ 0.29
CCDC12-211ENST00000604367 TBC1D5Q92609 795 aa16.86■□□□□ 0.29
CCDC12-211ENST00000604367 FBXO28Q9NVF7 368 aa16.86■□□□□ 0.29
CCDC12-211ENST00000604367 CYP3A7-CYP3A51PA0A087WV96 503 aa16.85■□□□□ 0.29
CCDC12-211ENST00000604367 PSDA5PKW4 1024 aaPredicted RBP16.85■□□□□ 0.29
CCDC12-211ENST00000604367 LRRC10BA6NIK2 292 aa16.85■□□□□ 0.29
CCDC12-211ENST00000604367 AKR1B15C9JRZ8 316 aaPredicted RBP16.85■□□□□ 0.29
CCDC12-211ENST00000604367 PES1O00541 588 aaKnown RBP16.85■□□□□ 0.29
CCDC12-211ENST00000604367 CYP3A7P24462 503 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms