RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 SOCS7O14512 581 aa13.89□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 MDM2Q00987 491 aaPredicted RBP13.89□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 POSTNQ15063 836 aa13.89□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 E2F4Q16254 413 aa13.89□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 LONRF3Q496Y0 759 aa13.89□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 TPRNQ4KMQ1 711 aa13.89□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 LDLRAD1Q5T700 205 aa13.89□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 CCDC174Q6PII3 467 aa13.89□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 NIPA1Q7RTP0 329 aa13.89□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 PRRT2Q7Z6L0 340 aaPredicted RBP13.89□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 POTEDQ86YR6 584 aa13.89□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 CKAP2LQ8IYA6 745 aa13.89□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 EPSTI1Q96J88 318 aa13.89□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 GTPBP4Q9BZE4 634 aaKnown RBP13.89□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 DISC1Q9NRI5 854 aa13.89□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 CTDP1Q9Y5B0 961 aaPredicted RBP13.89□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 RPTORQ8N122 1335 aa13.89□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 IRF6O14896 467 aa13.88□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 SMC2O95347 1197 aa13.88□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 TDP2O95551 362 aa13.88□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 UBA7P41226 1012 aa13.88□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 SETQ01105 290 aaPredicted RBP13.88□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 XRRA1Q6P2D8 792 aa13.88□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.88□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 CLEC4DQ8WXI8 215 aa13.88□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 STK17AQ9UEE5 414 aa13.88□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 KDM3AQ9Y4C1 1321 aa13.88□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 SLC37A4O43826 429 aa13.87□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 BCRP11274 1271 aa13.87□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 COPB2P35606 906 aa13.87□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 SARSP49591 514 aaKnown RBP13.87□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 NLRP12P59046 1061 aa13.87□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 SNAP25P60880 206 aa13.87□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 PABPC4Q13310 644 aaKnown RBP eCLIP13.87□□□□□ -0.195e-9■■■■□ 19.8
NEDD8-MDP1-203ENST00000604306 EAPPQ56P03 285 aaPredicted RBP13.87□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 HYIQ5T013 277 aa13.87□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 PDXDC2PQ6P474 469 aa13.87□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 USP49Q70CQ1 688 aa13.87□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 FASTKD5Q7L8L6 764 aaKnown RBP13.87□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 ETNPPLQ8TBG4 499 aa13.87□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 GTF3C2Q8WUA4 911 aaPredicted RBP13.87□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 GSDMAQ96QA5 445 aa13.87□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 TEX13BQ9BXU2 312 aa13.87□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 DCAF8L1A6NGE4 600 aa13.86□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 SPDYE16A6NNV3 312 aaPredicted RBP13.86□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 CFBP00751 764 aa13.86□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 ANO6Q4KMQ2 910 aa13.86□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 SPECC1Q5M775 1068 aa13.86□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 CABP7Q86V35 215 aa13.86□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 HAS1Q92839 578 aa13.86□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 CALML4Q96GE6 196 aa13.86□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 AGBL1Q96MI9 1066 aa13.86□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 P2RX7Q99572 595 aaKnown RBP13.86□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 NT5C3AQ9H0P0 336 aa13.86□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 LRWD1Q9UFC0 647 aa13.86□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 SERTAD1Q9UHV2 236 aa13.86□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 DACH1Q9UI36 760 aa13.86□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 ZNF214Q9UL59 606 aaPredicted RBP13.86□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 SLC45A1Q9Y2W3 748 aa13.86□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 LRRC37A2A6NM11 1700 aa13.86□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 ZNFX1Q9P2E3 1918 aaKnown RBP13.86□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 A0A087X0B3 334 aa13.85□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 GTPBP6O43824 516 aaPredicted RBP13.85□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 MUTP22033 750 aa13.85□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 STAT6P42226 847 aa13.85□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 ZNF165P49910 485 aa13.85□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 CCDC173Q0VFZ6 552 aa13.85□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 RRAGBQ5VZM2 374 aa13.85□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 HAUS3Q68CZ6 603 aa13.85□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 CNNM4Q6P4Q7 775 aa13.85□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 CHST13Q8NET6 341 aa13.85□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 SMARCE1Q969G3 411 aa13.85□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 LENG9Q96B70 501 aa13.85□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 DHX58Q96C10 678 aa13.85□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 ATG4CQ96DT6 458 aa13.85□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 PAGE5Q96GU1 130 aa13.85□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 LRRC27Q9C0I9 530 aa13.85□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 TTC12Q9H892 705 aaPredicted RBP13.85□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 KBTBD4Q9NVX7 518 aa13.85□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 FBXO40Q9UH90 709 aa13.85□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 PCDHA12Q9UN75 941 aa13.85□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 AGTPBP1Q9UPW5 1226 aa13.85□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 IGLV3-22A0A075B6J6 115 aa13.84□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 STAM2O75886 525 aa13.84□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 ALAS1P13196 640 aa13.84□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 HOXA13P31271 388 aaPredicted RBP13.84□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 TXKP42681 527 aa13.84□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 AMPD3Q01432 767 aa13.84□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 DPYDQ12882 1025 aa13.84□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 PNOCQ13519 176 aa13.84□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 TTLL12Q14166 644 aaPredicted RBP13.84□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 KRT79Q5XKE5 535 aa13.84□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 PCNX4Q63HM2 1172 aa13.84□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 PDILTQ8N807 584 aa13.84□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 MLKLQ8NB16 471 aa13.84□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 TRERF1Q96PN7 1200 aa13.84□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 PPP1R9BQ96SB3 815 aa13.84□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 ELP3Q9H9T3 547 aa13.84□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 RAVER2Q9HCJ3 691 aaKnown RBP13.84□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 RMND1Q9NWS8 449 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms