RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 HIBCHQ6NVY1 386 aaPredicted RBP13.23□□□□□ -0.29
SHANK2-218ENST00000601538 GRAMD1AQ96CP6 724 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 RGL1Q9NZL6 768 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 SUCLA2Q9P2R7 463 aaPredicted RBP13.23□□□□□ -0.29
SHANK2-218ENST00000601538 SPATA31E1Q6ZUB1 1445 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 KCTD16Q68DU8 428 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 RAPH1Q70E73 1250 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 PGRMC1O00264 195 aaKnown RBP13.23□□□□□ -0.29
SHANK2-218ENST00000601538 GYG2O15488 501 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 STAT2P52630 851 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 ADKP55263 362 aaKnown RBP13.23□□□□□ -0.29
SHANK2-218ENST00000601538 BFSP1Q12934 665 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 KRT39Q6A163 491 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 LSM14BQ9BX40 385 aaKnown RBP13.23□□□□□ -0.29
SHANK2-218ENST00000601538 FAM207AQ9NSI2 230 aaPredicted RBP13.23□□□□□ -0.29
SHANK2-218ENST00000601538 CHEK2O96017 543 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 SCG2P13521 617 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 ABCD1P33897 745 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 TRIM8Q9BZR9 551 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 TRAPPC8Q9Y2L5 1435 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 MYH7BA7E2Y1 1941 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 LIN7AO14910 233 aaPredicted RBP13.23□□□□□ -0.29
SHANK2-218ENST00000601538 ZRANB2O95218 330 aaKnown RBP eCLIP13.23□□□□□ -0.29
SHANK2-218ENST00000601538 ARHGEF25Q86VW2 580 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 STX19Q8N4C7 294 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 CEP55Q53EZ4 464 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 TRMT10CQ7L0Y3 403 aaKnown RBP13.23□□□□□ -0.29
SHANK2-218ENST00000601538 TCEANC2Q96MN5 208 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 NYXQ9GZU5 481 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 EPN3Q9H201 632 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 RTEL1Q9NZ71 1219 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 TSC22D4Q9Y3Q8 395 aa13.23□□□□□ -0.29
SHANK2-218ENST00000601538 MCM9Q9NXL9 1143 aa13.22□□□□□ -0.29
SHANK2-218ENST00000601538 WARS2Q9UGM6 360 aaKnown RBP13.22□□□□□ -0.29
SHANK2-218ENST00000601538 MKL2Q9ULH7 1088 aa13.22□□□□□ -0.29
SHANK2-218ENST00000601538 ANO9A1A5B4 782 aa13.22□□□□□ -0.29
SHANK2-218ENST00000601538 KRR1Q13601 381 aaKnown RBP13.22□□□□□ -0.29
SHANK2-218ENST00000601538 PARD6BQ9BYG5 372 aa13.22□□□□□ -0.29
SHANK2-218ENST00000601538 PCDHB13Q9Y5F0 798 aa13.22□□□□□ -0.29
SHANK2-218ENST00000601538 ENO4A6NNW6 628 aa13.22□□□□□ -0.29
SHANK2-218ENST00000601538 BSPRYQ5W0U4 402 aa13.22□□□□□ -0.29
SHANK2-218ENST00000601538 SH3GL2Q99962 352 aa13.22□□□□□ -0.29
SHANK2-218ENST00000601538 C1orf112Q9NSG2 853 aa13.22□□□□□ -0.29
SHANK2-218ENST00000601538 MYOM2P54296 1465 aa13.22□□□□□ -0.29
SHANK2-218ENST00000601538 MSL3Q8N5Y2 521 aaKnown RBP13.22□□□□□ -0.29
SHANK2-218ENST00000601538 STX18Q9P2W9 335 aaKnown RBP13.22□□□□□ -0.29
SHANK2-218ENST00000601538 CARSP49589 748 aaKnown RBP13.22□□□□□ -0.29
SHANK2-218ENST00000601538 CCDC15Q0P6D6 951 aa13.22□□□□□ -0.29
SHANK2-218ENST00000601538 AP1B1Q10567 949 aa13.22□□□□□ -0.29
SHANK2-218ENST00000601538 MAGEB6Q8N7X4 407 aa13.22□□□□□ -0.29
SHANK2-218ENST00000601538 IQANK1A0A1B0GTG1 560 aa13.22□□□□□ -0.29
SHANK2-218ENST00000601538 SEMA3EO15041 775 aa13.22□□□□□ -0.29
SHANK2-218ENST00000601538 HNRNPRO43390 633 aaKnown RBP13.22□□□□□ -0.29
SHANK2-218ENST00000601538 NCOA3Q9Y6Q9 1424 aa13.22□□□□□ -0.29
SHANK2-218ENST00000601538 NVLO15381 856 aaKnown RBP13.22□□□□□ -0.29
SHANK2-218ENST00000601538 MYCT1Q8N699 235 aa13.22□□□□□ -0.29
SHANK2-218ENST00000601538 CDC42BPAQ5VT25 1732 aa13.22□□□□□ -0.29
SHANK2-218ENST00000601538 SLFN14P0C7P3 912 aa13.22□□□□□ -0.29
SHANK2-218ENST00000601538 PLS1Q14651 629 aa13.22□□□□□ -0.29
SHANK2-218ENST00000601538 KIF9Q9HAQ2 790 aa13.22□□□□□ -0.29
SHANK2-218ENST00000601538 DDX28Q9NUL7 540 aaKnown RBP13.22□□□□□ -0.29
SHANK2-218ENST00000601538 HSPA9P38646 679 aaKnown RBP13.21□□□□□ -0.29
SHANK2-218ENST00000601538 SNX29Q8TEQ0 813 aa13.21□□□□□ -0.29
SHANK2-218ENST00000601538 ZNF229Q9UJW7 825 aa13.21□□□□□ -0.29
SHANK2-218ENST00000601538 AOC3Q16853 763 aa13.21□□□□□ -0.29
SHANK2-218ENST00000601538 ABCC5O15440 1437 aa13.21□□□□□ -0.29
SHANK2-218ENST00000601538 CROCCQ5TZA2 2017 aa13.21□□□□□ -0.29
SHANK2-218ENST00000601538 U2AF1L4Q8WU68 220 aaKnown RBP13.21□□□□□ -0.29
SHANK2-218ENST00000601538 DACH2Q96NX9 599 aa13.21□□□□□ -0.29
SHANK2-218ENST00000601538 STMN3Q9NZ72 180 aa13.21□□□□□ -0.29
SHANK2-218ENST00000601538 CPP00450 1065 aa13.21□□□□□ -0.3
SHANK2-218ENST00000601538 DEFA1P59665 94 aa13.21□□□□□ -0.3
SHANK2-218ENST00000601538 DEFA3P59666 94 aa13.21□□□□□ -0.3
SHANK2-218ENST00000601538 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.21□□□□□ -0.32e-6■■■■■ 37.9
SHANK2-218ENST00000601538 DYDC2Q96IM9 177 aa13.21□□□□□ -0.3
SHANK2-218ENST00000601538 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.21□□□□□ -0.3
SHANK2-218ENST00000601538 ARMCX3Q9UH62 379 aaPredicted RBP13.21□□□□□ -0.3
SHANK2-218ENST00000601538 EIF3HO15372 352 aaKnown RBP eCLIP13.21□□□□□ -0.34e-8■■□□□ 11.4
SHANK2-218ENST00000601538 SEC24BO95487 1268 aa13.21□□□□□ -0.3
SHANK2-218ENST00000601538 YWHAGP61981 247 aaKnown RBP eCLIP13.21□□□□□ -0.3
SHANK2-218ENST00000601538 SPARCL1Q14515 664 aa13.21□□□□□ -0.3
SHANK2-218ENST00000601538 KSR2Q6VAB6 950 aa13.21□□□□□ -0.3
SHANK2-218ENST00000601538 OSBPL1AQ9BXW6 950 aa13.21□□□□□ -0.3
SHANK2-218ENST00000601538 PLEKHG2Q9H7P9 1386 aa13.21□□□□□ -0.3
SHANK2-218ENST00000601538 CDC42BPBQ9Y5S2 1711 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 NEK9Q8TD19 979 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 MTRQ99707 1265 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 MPP6Q9NZW5 540 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 IFNAR2P48551 515 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 ARHGEF10LQ9HCE6 1279 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 TUBA4AP68366 448 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 MED21Q13503 144 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 OTUD6AQ7L8S5 288 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 NEUROG2Q9H2A3 272 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 TMEM51Q9NW97 253 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 LCMT1Q9UIC8 334 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 OATP04181 439 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 RAB14P61106 215 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 SGSM3Q96HU1 749 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 S100A5P33763 92 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms