RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 LRRC47Q8N1G4 583 aaKnown RBP16.12■□□□□ 0.17
SMG9-211ENST00000601170 ZNF713Q8N859 430 aaPredicted RBP16.12■□□□□ 0.17
SMG9-211ENST00000601170 LARP4BQ92615 738 aaKnown RBP16.12■□□□□ 0.17
SMG9-211ENST00000601170 CDK5RAP3Q96JB5 506 aa16.12■□□□□ 0.17
SMG9-211ENST00000601170 MMS19Q96T76 1030 aa16.12■□□□□ 0.17
SMG9-211ENST00000601170 RNF216Q9NWF9 866 aaPredicted RBP16.12■□□□□ 0.17
SMG9-211ENST00000601170 POTEMA6NI47 508 aa16.11■□□□□ 0.17
SMG9-211ENST00000601170 EIF3JO75822 258 aaKnown RBP16.11■□□□□ 0.17
SMG9-211ENST00000601170 CYP27A1Q02318 531 aa16.11■□□□□ 0.17
SMG9-211ENST00000601170 CASP8Q14790 479 aa16.11■□□□□ 0.17
SMG9-211ENST00000601170 CRY2Q49AN0 593 aa16.11■□□□□ 0.17
SMG9-211ENST00000601170 MSL3Q8N5Y2 521 aaKnown RBP16.11■□□□□ 0.17
SMG9-211ENST00000601170 CERKQ8TCT0 537 aa16.11■□□□□ 0.17
SMG9-211ENST00000601170 ZBTB9Q96C00 473 aa16.11■□□□□ 0.17
SMG9-211ENST00000601170 CAPZA3Q96KX2 299 aa16.11■□□□□ 0.17
SMG9-211ENST00000601170 MTMR4Q9NYA4 1195 aa16.11■□□□□ 0.17
SMG9-211ENST00000601170 PLIN4Q96Q06 1357 aa16.11■□□□□ 0.17
SMG9-211ENST00000601170 EDIL3O43854 480 aa16.11■□□□□ 0.17
SMG9-211ENST00000601170 EIF6P56537 245 aaKnown RBP16.11■□□□□ 0.17
SMG9-211ENST00000601170 TXLNBQ8N3L3 684 aa16.11■□□□□ 0.17
SMG9-211ENST00000601170 CALCOCO1Q9P1Z2 691 aa16.11■□□□□ 0.17
SMG9-211ENST00000601170 ADAM21Q9UKJ8 722 aa16.11■□□□□ 0.17
SMG9-211ENST00000601170 DUSP10Q9Y6W6 482 aa16.11■□□□□ 0.17
SMG9-211ENST00000601170 THSD7AQ9UPZ6 1657 aa16.1■□□□□ 0.17
SMG9-211ENST00000601170 PVALEFA0A1B0GWK0 134 aa16.1■□□□□ 0.17
SMG9-211ENST00000601170 USP14P54578 494 aa16.1■□□□□ 0.17
SMG9-211ENST00000601170 CDK17Q00537 523 aa16.1■□□□□ 0.17
SMG9-211ENST00000601170 PICALMQ13492 652 aa16.1■□□□□ 0.17
SMG9-211ENST00000601170 VWA3BQ502W6 1294 aa16.1■□□□□ 0.17
SMG9-211ENST00000601170 ASPRV1Q53RT3 343 aa16.1■□□□□ 0.17
SMG9-211ENST00000601170 TBC1D22AQ8WUA7 517 aa16.1■□□□□ 0.17
SMG9-211ENST00000601170 RBM17Q96I25 401 aaKnown RBP16.1■□□□□ 0.17
SMG9-211ENST00000601170 POLLQ9UGP5 575 aa16.1■□□□□ 0.17
SMG9-211ENST00000601170 DAGLAQ9Y4D2 1042 aa16.1■□□□□ 0.17
SMG9-211ENST00000601170 MACROD2A1Z1Q3 448 aa16.09■□□□□ 0.17
SMG9-211ENST00000601170 PLEKP08567 350 aaPredicted RBP16.09■□□□□ 0.17
SMG9-211ENST00000601170 VAV2P52735 878 aa16.09■□□□□ 0.17
SMG9-211ENST00000601170 CLEC10AQ8IUN9 316 aa16.09■□□□□ 0.17
SMG9-211ENST00000601170 TBC1D16Q8TBP0 767 aa16.09■□□□□ 0.17
SMG9-211ENST00000601170 SNX29Q8TEQ0 813 aa16.09■□□□□ 0.17
SMG9-211ENST00000601170 CCDC42Q96M95 316 aa16.09■□□□□ 0.17
SMG9-211ENST00000601170 PURBQ96QR8 312 aaKnown RBP16.09■□□□□ 0.17
SMG9-211ENST00000601170 RAB34Q9BZG1 259 aa16.09■□□□□ 0.17
SMG9-211ENST00000601170 NDST4Q9H3R1 872 aa16.09■□□□□ 0.17
SMG9-211ENST00000601170 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.09■□□□□ 0.17
SMG9-211ENST00000601170 ZNF263O14978 683 aa16.09■□□□□ 0.17
SMG9-211ENST00000601170 EPHB6O15197 1021 aa16.09■□□□□ 0.17
SMG9-211ENST00000601170 N4BP1O75113 896 aaKnown RBP16.09■□□□□ 0.17
SMG9-211ENST00000601170 AKR1B1P15121 316 aa16.09■□□□□ 0.17
SMG9-211ENST00000601170 TNNI2P48788 182 aa16.09■□□□□ 0.17
SMG9-211ENST00000601170 KIF5AQ12840 1032 aa16.09■□□□□ 0.17
SMG9-211ENST00000601170 RAD54LQ92698 747 aa16.09■□□□□ 0.17
SMG9-211ENST00000601170 EXOC4Q96A65 974 aa16.09■□□□□ 0.17
SMG9-211ENST00000601170 IQCDQ96DY2 449 aa16.09■□□□□ 0.17
SMG9-211ENST00000601170 NUDT12Q9BQG2 462 aa16.09■□□□□ 0.17
SMG9-211ENST00000601170 GPCPD1Q9NPB8 672 aa16.09■□□□□ 0.17
SMG9-211ENST00000601170 VPS18Q9P253 973 aa16.09■□□□□ 0.17
SMG9-211ENST00000601170 PLAGL2Q9UPG8 496 aa16.09■□□□□ 0.17
SMG9-211ENST00000601170 SIK3Q9Y2K2 1263 aa16.09■□□□□ 0.17
SMG9-211ENST00000601170 ANO9A1A5B4 782 aa16.08■□□□□ 0.17
SMG9-211ENST00000601170 SNHG28P0DPA3 235 aa16.08■□□□□ 0.17
SMG9-211ENST00000601170 IDEP14735 1019 aa16.08■□□□□ 0.17
SMG9-211ENST00000601170 HNRNPH2P55795 449 aaKnown RBP16.08■□□□□ 0.17
SMG9-211ENST00000601170 CKAP4Q07065 602 aaKnown RBP16.08■□□□□ 0.17
SMG9-211ENST00000601170 SPA17Q15506 151 aa16.08■□□□□ 0.17
SMG9-211ENST00000601170 KRT79Q5XKE5 535 aa16.08■□□□□ 0.17
SMG9-211ENST00000601170 KRT26Q7Z3Y9 468 aa16.08■□□□□ 0.17
SMG9-211ENST00000601170 GUF1Q8N442 669 aaKnown RBP16.08■□□□□ 0.17
SMG9-211ENST00000601170 SECISBP2LQ93073 1101 aaKnown RBP16.08■□□□□ 0.17
SMG9-211ENST00000601170 FAM207AQ9NSI2 230 aaPredicted RBP16.08■□□□□ 0.17
SMG9-211ENST00000601170 LRRIQ3A6PVS8 624 aaPredicted RBP16.08■□□□□ 0.16
SMG9-211ENST00000601170 HNRNPH3P31942 346 aaKnown RBP16.08■□□□□ 0.16
SMG9-211ENST00000601170 GABPAQ06546 454 aa16.08■□□□□ 0.16
SMG9-211ENST00000601170 PDIA5Q14554 519 aa16.08■□□□□ 0.16
SMG9-211ENST00000601170 MAN2A1Q16706 1144 aa16.08■□□□□ 0.16
SMG9-211ENST00000601170 DPP8Q6V1X1 898 aaPredicted RBP16.08■□□□□ 0.16
SMG9-211ENST00000601170 KCNK18Q7Z418 384 aa16.08■□□□□ 0.16
SMG9-211ENST00000601170 C2CD5Q86YS7 1000 aa16.08■□□□□ 0.16
SMG9-211ENST00000601170 RPGRIP1Q96KN7 1286 aa16.08■□□□□ 0.16
SMG9-211ENST00000601170 TSGA10Q9BZW7 698 aa16.08■□□□□ 0.16
SMG9-211ENST00000601170 PODXL2Q9NZ53 605 aa16.08■□□□□ 0.16
SMG9-211ENST00000601170 ARHGAP20Q9P2F6 1191 aa16.08■□□□□ 0.16
SMG9-211ENST00000601170 C6orf229H3BNL8 230 aa16.07■□□□□ 0.16
SMG9-211ENST00000601170 ZNF185O15231 689 aa16.07■□□□□ 0.16
SMG9-211ENST00000601170 SERPINB2P05120 415 aa16.07■□□□□ 0.16
SMG9-211ENST00000601170 GTF2IP78347 998 aa16.07■□□□□ 0.16
SMG9-211ENST00000601170 UBE2SQ16763 222 aa16.07■□□□□ 0.16
SMG9-211ENST00000601170 DDX12PQ92771 950 aa16.07■□□□□ 0.16
SMG9-211ENST00000601170 MMRN2Q9H8L6 949 aa16.07■□□□□ 0.16
SMG9-211ENST00000601170 LRRC4BQ9NT99 713 aa16.07■□□□□ 0.16
SMG9-211ENST00000601170 IGKV6D-41A0A0C4DH26 115 aa16.07■□□□□ 0.16
SMG9-211ENST00000601170 FGFR1OPO95684 399 aaKnown RBP16.07■□□□□ 0.16
SMG9-211ENST00000601170 LRRC63Q05C16 580 aa16.07■□□□□ 0.16
SMG9-211ENST00000601170 CCDC96Q2M329 555 aa16.07■□□□□ 0.16
SMG9-211ENST00000601170 TMEM119Q4V9L6 283 aa16.07■□□□□ 0.16
SMG9-211ENST00000601170 FNBP4Q8N3X1 1017 aaPredicted RBP16.07■□□□□ 0.16
SMG9-211ENST00000601170 GLIS3Q8NEA6 775 aa16.07■□□□□ 0.16
SMG9-211ENST00000601170 CAGE1Q8TC20 777 aa16.07■□□□□ 0.16
SMG9-211ENST00000601170 JADE2Q9NQC1 790 aa16.07■□□□□ 0.16
SMG9-211ENST00000601170 PSD3Q9NYI0 1048 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms