RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 KLRF2D3W0D1 207 aa17.51■□□□□ 0.39
SHKBP1-226ENST00000600791 MYL3P08590 195 aa17.51■□□□□ 0.39
SHKBP1-226ENST00000600791 TXNP10599 105 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-226ENST00000600791 TMEM240Q5SV17 173 aa17.51■□□□□ 0.39
SHKBP1-226ENST00000600791 STOX1Q6ZVD7 989 aa17.51■□□□□ 0.39
SHKBP1-226ENST00000600791 NSUN6Q8TEA1 469 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-226ENST00000600791 MTMR8Q96EF0 704 aa17.51■□□□□ 0.39
SHKBP1-226ENST00000600791 RMDN3Q96TC7 470 aa17.51■□□□□ 0.39
SHKBP1-226ENST00000600791 ALDH8A1Q9H2A2 487 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-226ENST00000600791 SEMA6BQ9H3T3 888 aa17.51■□□□□ 0.39
SHKBP1-226ENST00000600791 SENP2Q9HC62 589 aa17.51■□□□□ 0.39
SHKBP1-226ENST00000600791 KIAA1217Q5T5P2 1943 aa17.51■□□□□ 0.39
SHKBP1-226ENST00000600791 PALM3A6NDB9 673 aaPredicted RBP17.5■□□□□ 0.39
SHKBP1-226ENST00000600791 A6NJR5 290 aa17.5■□□□□ 0.39
SHKBP1-226ENST00000600791 E7EWF7 191 aa17.5■□□□□ 0.39
SHKBP1-226ENST00000600791 OPLAHO14841 1288 aa17.5■□□□□ 0.39
SHKBP1-226ENST00000600791 IFIT3O14879 490 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-226ENST00000600791 PPP1R11O60927 126 aaPredicted RBP17.5■□□□□ 0.39
SHKBP1-226ENST00000600791 ACRP10323 421 aa17.5■□□□□ 0.39
SHKBP1-226ENST00000600791 TTLL4Q14679 1199 aa17.5■□□□□ 0.39
SHKBP1-226ENST00000600791 BRDTQ58F21 947 aaPredicted RBP17.5■□□□□ 0.39
SHKBP1-226ENST00000600791 PSRC1Q6PGN9 363 aaPredicted RBP17.5■□□□□ 0.39
SHKBP1-226ENST00000600791 RALYLQ86SE5 291 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-226ENST00000600791 CDX2Q99626 313 aaPredicted RBP17.5■□□□□ 0.39
SHKBP1-226ENST00000600791 MTG1Q9BT17 334 aaPredicted RBP17.5■□□□□ 0.39
SHKBP1-226ENST00000600791 NOC4LQ9BVI4 516 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-226ENST00000600791 AMNQ9BXJ7 453 aa17.5■□□□□ 0.39
SHKBP1-226ENST00000600791 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.49■□□□□ 0.39
SHKBP1-226ENST00000600791 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.49■□□□□ 0.39
SHKBP1-226ENST00000600791 ZBTB5O15062 677 aa17.49■□□□□ 0.39
SHKBP1-226ENST00000600791 CFBP00751 764 aa17.49■□□□□ 0.39
SHKBP1-226ENST00000600791 GRM4Q14833 912 aa17.49■□□□□ 0.39
SHKBP1-226ENST00000600791 SLC35G1Q2M3R5 365 aa17.49■□□□□ 0.39
SHKBP1-226ENST00000600791 RASIP1Q5U651 963 aa17.49■□□□□ 0.39
SHKBP1-226ENST00000600791 CCDC62Q6P9F0 684 aa17.49■□□□□ 0.39
SHKBP1-226ENST00000600791 ZNF365Q70YC5 407 aa17.49■□□□□ 0.39
SHKBP1-226ENST00000600791 CHST3Q7LGC8 479 aa17.49■□□□□ 0.39
SHKBP1-226ENST00000600791 NCOA7Q8NI08 942 aa17.49■□□□□ 0.39
SHKBP1-226ENST00000600791 MAP4K1Q92918 833 aa17.49■□□□□ 0.39
SHKBP1-226ENST00000600791 IWS1Q96ST2 819 aa17.49■□□□□ 0.39
SHKBP1-226ENST00000600791 WNT8AQ9H1J5 351 aa17.49■□□□□ 0.39
SHKBP1-226ENST00000600791 IL23AQ9NPF7 189 aa17.49■□□□□ 0.39
SHKBP1-226ENST00000600791 GPHNQ9NQX3 736 aaPredicted RBP17.49■□□□□ 0.39
SHKBP1-226ENST00000600791 TRMT13Q9NUP7 481 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-226ENST00000600791 PRUNE2Q8WUY3 3088 aa17.49■□□□□ 0.39
SHKBP1-226ENST00000600791 BAZ2BQ9UIF8 2168 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-226ENST00000600791 TMEM265A0A087WTH1 108 aa17.48■□□□□ 0.39
SHKBP1-226ENST00000600791 ERICH2A1L162 156 aa17.48■□□□□ 0.39
SHKBP1-226ENST00000600791 EIF2AK2P19525 551 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-226ENST00000600791 DNAJB2P25686 324 aa17.48■□□□□ 0.39
SHKBP1-226ENST00000600791 HSD17B4P51659 736 aa17.48■□□□□ 0.39
SHKBP1-226ENST00000600791 CCL23P55773 120 aa17.48■□□□□ 0.39
SHKBP1-226ENST00000600791 GHRHRQ02643 423 aa17.48■□□□□ 0.39
SHKBP1-226ENST00000600791 WTAPQ15007 396 aa17.48■□□□□ 0.39
SHKBP1-226ENST00000600791 STXBP2Q15833 593 aa17.48■□□□□ 0.39
SHKBP1-226ENST00000600791 ARHGEF16Q5VV41 709 aa17.48■□□□□ 0.39
SHKBP1-226ENST00000600791 SEPT14Q6ZU15 432 aa17.48■□□□□ 0.39
SHKBP1-226ENST00000600791 HOMER1Q86YM7 354 aa17.48■□□□□ 0.39
SHKBP1-226ENST00000600791 RBM8AQ9Y5S9 174 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-226ENST00000600791 CHD9Q3L8U1 2897 aa17.47■□□□□ 0.39
SHKBP1-226ENST00000600791 KPNA6O60684 536 aa17.47■□□□□ 0.39
SHKBP1-226ENST00000600791 ANTXR2P58335 489 aa17.47■□□□□ 0.39
SHKBP1-226ENST00000600791 TROAPQ12815 778 aa17.47■□□□□ 0.39
SHKBP1-226ENST00000600791 SART3Q15020 963 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-226ENST00000600791 LY6KQ17RY6 165 aa17.47■□□□□ 0.39
SHKBP1-226ENST00000600791 NBPF20Q3BBV1 942 aa17.47■□□□□ 0.39
SHKBP1-226ENST00000600791 MB21D2Q8IYB1 491 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-226ENST00000600791 PPP1R13LQ8WUF5 828 aa17.47■□□□□ 0.39
SHKBP1-226ENST00000600791 RIOX1Q9H6W3 641 aa17.47■□□□□ 0.39
SHKBP1-226ENST00000600791 PXMP2Q9NR77 195 aa17.47■□□□□ 0.39
SHKBP1-226ENST00000600791 PCDHA1Q9Y5I3 950 aa17.47■□□□□ 0.39
SHKBP1-226ENST00000600791 VCANP13611 3396 aa17.46■□□□□ 0.39
SHKBP1-226ENST00000600791 CYTH3O43739 400 aa17.46■□□□□ 0.39
SHKBP1-226ENST00000600791 GH1P01241 217 aa17.46■□□□□ 0.39
SHKBP1-226ENST00000600791 SUPT20HL2P0C7V6 817 aa17.46■□□□□ 0.39
SHKBP1-226ENST00000600791 CYP2C9P11712 490 aa17.46■□□□□ 0.39
SHKBP1-226ENST00000600791 ARHGAP1Q07960 439 aa17.46■□□□□ 0.39
SHKBP1-226ENST00000600791 FAM47CQ5HY64 1035 aa17.46■□□□□ 0.39
SHKBP1-226ENST00000600791 TMEM67Q5HYA8 995 aa17.46■□□□□ 0.39
SHKBP1-226ENST00000600791 NFRKBQ6P4R8 1299 aa17.46■□□□□ 0.39
SHKBP1-226ENST00000600791 AFG1LQ8WV93 481 aa17.46■□□□□ 0.39
SHKBP1-226ENST00000600791 MYLIPQ8WY64 445 aa17.46■□□□□ 0.39
SHKBP1-226ENST00000600791 HERVK_113Q902F9 699 aa17.46■□□□□ 0.39
SHKBP1-226ENST00000600791 PIGSQ96S52 555 aa17.46■□□□□ 0.39
SHKBP1-226ENST00000600791 CXXC1Q9P0U4 656 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-226ENST00000600791 GRXCR1A8MXD5 290 aa17.45■□□□□ 0.38
SHKBP1-226ENST00000600791 EIF3JO75822 258 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-226ENST00000600791 NR3C2P08235 984 aa17.45■□□□□ 0.38
SHKBP1-226ENST00000600791 MMP3P08254 477 aa17.45■□□□□ 0.38
SHKBP1-226ENST00000600791 IGDCC4Q8TDY8 1250 aa17.45■□□□□ 0.38
SHKBP1-226ENST00000600791 TIFAQ96CG3 184 aa17.45■□□□□ 0.38
SHKBP1-226ENST00000600791 SCLYQ96I15 445 aa17.45■□□□□ 0.38
SHKBP1-226ENST00000600791 PDCD2LQ9BRP1 358 aa17.45■□□□□ 0.38
SHKBP1-226ENST00000600791 PBX4Q9BYU1 374 aa17.45■□□□□ 0.38
SHKBP1-226ENST00000600791 MAP3K20Q9NYL2 800 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-226ENST00000600791 TANC1Q9C0D5 1861 aa17.45■□□□□ 0.38
SHKBP1-226ENST00000600791 FGBP02675 491 aa17.44■□□□□ 0.38
SHKBP1-226ENST00000600791 HOXA13P31271 388 aaPredicted RBP17.44■□□□□ 0.38
SHKBP1-226ENST00000600791 PBX2P40425 430 aa17.44■□□□□ 0.38
SHKBP1-226ENST00000600791 OTOP2Q7RTS6 562 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms