RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 FAM161BQ96MY7 647 aa13.47□□□□□ -0.25
SOX2-OT-233ENST00000600778 AMNQ9BXJ7 453 aa13.47□□□□□ -0.25
SOX2-OT-233ENST00000600778 PPP1R12CQ9BZL4 782 aa13.47□□□□□ -0.25
SOX2-OT-233ENST00000600778 MAF1Q9H063 256 aa13.47□□□□□ -0.25
SOX2-OT-233ENST00000600778 POLR3EQ9NVU0 708 aa13.47□□□□□ -0.25
SOX2-OT-233ENST00000600778 MTMR10Q9NXD2 777 aa13.47□□□□□ -0.25
SOX2-OT-233ENST00000600778 ZBTB5O15062 677 aa13.46□□□□□ -0.25
SOX2-OT-233ENST00000600778 NKRFO15226 690 aaKnown RBP eCLIP13.46□□□□□ -0.25
SOX2-OT-233ENST00000600778 PPP1R11O60927 126 aaPredicted RBP13.46□□□□□ -0.25
SOX2-OT-233ENST00000600778 TXNP10599 105 aaKnown RBP13.46□□□□□ -0.25
SOX2-OT-233ENST00000600778 ANTXR2P58335 489 aa13.46□□□□□ -0.25
SOX2-OT-233ENST00000600778 CACNB1Q02641 598 aaPredicted RBP13.46□□□□□ -0.25
SOX2-OT-233ENST00000600778 TTLL4Q14679 1199 aa13.46□□□□□ -0.25
SOX2-OT-233ENST00000600778 GRM4Q14833 912 aa13.46□□□□□ -0.25
SOX2-OT-233ENST00000600778 ARHGEF16Q5VV41 709 aa13.46□□□□□ -0.25
SOX2-OT-233ENST00000600778 SEPT14Q6ZU15 432 aa13.46□□□□□ -0.25
SOX2-OT-233ENST00000600778 NSUN6Q8TEA1 469 aaKnown RBP13.46□□□□□ -0.25
SOX2-OT-233ENST00000600778 MTMR8Q96EF0 704 aa13.46□□□□□ -0.25
SOX2-OT-233ENST00000600778 PIGSQ96S52 555 aa13.46□□□□□ -0.25
SOX2-OT-233ENST00000600778 RMDN3Q96TC7 470 aa13.46□□□□□ -0.25
SOX2-OT-233ENST00000600778 LSG1Q9H089 658 aaKnown RBP13.46□□□□□ -0.25
SOX2-OT-233ENST00000600778 TRPV6Q9H1D0 765 aa13.46□□□□□ -0.25
SOX2-OT-233ENST00000600778 GPHNQ9NQX3 736 aaPredicted RBP13.46□□□□□ -0.25
SOX2-OT-233ENST00000600778 MYH6P13533 1939 aa13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 B4GALT4O60513 344 aa13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 ARIH2O95376 493 aa13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 CSF2RAP15509 400 aa13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 EIF2AK2P19525 551 aaKnown RBP13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 CYP2C18P33260 490 aa13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 PURAQ00577 322 aaKnown RBP13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 TROAPQ12815 778 aa13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 STXBP2Q15833 593 aa13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 SLC35G1Q2M3R5 365 aa13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 BRDTQ58F21 947 aaPredicted RBP13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 BMP2KLQ5H9B9 411 aa13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 FAM109BQ6ICB4 259 aaPredicted RBP13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 CATIPQ7Z7H3 387 aa13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 MB21D2Q8IYB1 491 aaPredicted RBP13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 TMEM199Q8N511 208 aa13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 IGDCC4Q8TDY8 1250 aa13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 IWS1Q96ST2 819 aa13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 ESYT1Q9BSJ8 1104 aa13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 SEZ6LQ9BYH1 1024 aa13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 RIOX1Q9H6W3 641 aa13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 PCDHA1Q9Y5I3 950 aa13.45□□□□□ -0.26
SOX2-OT-233ENST00000600778 OPLAHO14841 1288 aa13.44□□□□□ -0.26
SOX2-OT-233ENST00000600778 CYTH3O43739 400 aa13.44□□□□□ -0.26
SOX2-OT-233ENST00000600778 ACRP10323 421 aa13.44□□□□□ -0.26
SOX2-OT-233ENST00000600778 SMAD3P84022 425 aaKnown RBP13.44□□□□□ -0.26
SOX2-OT-233ENST00000600778 PPIGQ13427 754 aaKnown RBP eCLIP13.44□□□□□ -0.26
SOX2-OT-233ENST00000600778 LY6KQ17RY6 165 aa13.44□□□□□ -0.26
SOX2-OT-233ENST00000600778 ZNF697Q5TEC3 545 aa13.44□□□□□ -0.26
SOX2-OT-233ENST00000600778 CASC1Q6TDU7 716 aa13.44□□□□□ -0.26
SOX2-OT-233ENST00000600778 PIBF1Q8WXW3 757 aa13.44□□□□□ -0.26
SOX2-OT-233ENST00000600778 MTG1Q9BT17 334 aaPredicted RBP13.44□□□□□ -0.26
SOX2-OT-233ENST00000600778 HIPK3Q9H422 1215 aa13.44□□□□□ -0.26
SOX2-OT-233ENST00000600778 PXMP2Q9NR77 195 aa13.44□□□□□ -0.26
SOX2-OT-233ENST00000600778 UMODL1Q5DID0 1318 aa13.43□□□□□ -0.26
SOX2-OT-233ENST00000600778 A6NJR5 290 aa13.43□□□□□ -0.26
SOX2-OT-233ENST00000600778 SLC27A2O14975 620 aa13.43□□□□□ -0.26
SOX2-OT-233ENST00000600778 PRC1O43663 620 aa13.43□□□□□ -0.26
SOX2-OT-233ENST00000600778 NR3C2P08235 984 aa13.43□□□□□ -0.26
SOX2-OT-233ENST00000600778 HOXA13P31271 388 aaPredicted RBP13.43□□□□□ -0.26
SOX2-OT-233ENST00000600778 HSD17B4P51659 736 aa13.43□□□□□ -0.26
SOX2-OT-233ENST00000600778 CCL23P55773 120 aa13.43□□□□□ -0.26
SOX2-OT-233ENST00000600778 NBPF20Q3BBV1 942 aa13.43□□□□□ -0.26
SOX2-OT-233ENST00000600778 TMEM240Q5SV17 173 aa13.43□□□□□ -0.26
SOX2-OT-233ENST00000600778 CREB3L3Q68CJ9 461 aa13.43□□□□□ -0.26
SOX2-OT-233ENST00000600778 CCDC62Q6P9F0 684 aa13.43□□□□□ -0.26
SOX2-OT-233ENST00000600778 C16orf59Q7L2K0 433 aa13.43□□□□□ -0.26
SOX2-OT-233ENST00000600778 PPP1R13LQ8WUF5 828 aa13.43□□□□□ -0.26
SOX2-OT-233ENST00000600778 ALDH8A1Q9H2A2 487 aaPredicted RBP13.43□□□□□ -0.26
SOX2-OT-233ENST00000600778 LY9Q9HBG7 655 aa13.43□□□□□ -0.26
SOX2-OT-233ENST00000600778 ANO2Q9NQ90 1003 aa13.43□□□□□ -0.26
SOX2-OT-233ENST00000600778 MAP3K20Q9NYL2 800 aaKnown RBP13.43□□□□□ -0.26
SOX2-OT-233ENST00000600778 STXBP5LQ9Y2K9 1186 aa13.43□□□□□ -0.26
SOX2-OT-233ENST00000600778 PNMA6FA0A0J9YX94 578 aa13.42□□□□□ -0.26
SOX2-OT-233ENST00000600778 KPNA6O60684 536 aa13.42□□□□□ -0.26
SOX2-OT-233ENST00000600778 EIF3JO75822 258 aaKnown RBP13.42□□□□□ -0.26
SOX2-OT-233ENST00000600778 GH1P01241 217 aa13.42□□□□□ -0.26
SOX2-OT-233ENST00000600778 MYCLP12524 364 aaPredicted RBP13.42□□□□□ -0.26
SOX2-OT-233ENST00000600778 MCM5P33992 734 aa13.42□□□□□ -0.26
SOX2-OT-233ENST00000600778 CHMP4BP1P59074 171 aa13.42□□□□□ -0.26
SOX2-OT-233ENST00000600778 TRAF1Q13077 416 aa13.42□□□□□ -0.26
SOX2-OT-233ENST00000600778 NECTIN1Q15223 517 aa13.42□□□□□ -0.26
SOX2-OT-233ENST00000600778 FAM47CQ5HY64 1035 aa13.42□□□□□ -0.26
SOX2-OT-233ENST00000600778 NFXL1Q6ZNB6 911 aa13.42□□□□□ -0.26
SOX2-OT-233ENST00000600778 ZNF365Q70YC5 407 aa13.42□□□□□ -0.26
SOX2-OT-233ENST00000600778 ZNF654Q8IZM8 581 aa13.42□□□□□ -0.26
SOX2-OT-233ENST00000600778 SLC17A8Q8NDX2 589 aa13.42□□□□□ -0.26
SOX2-OT-233ENST00000600778 AFG1LQ8WV93 481 aa13.42□□□□□ -0.26
SOX2-OT-233ENST00000600778 GUCD1Q96NT3 240 aa13.42□□□□□ -0.26
SOX2-OT-233ENST00000600778 MYL10Q9BUA6 226 aa13.42□□□□□ -0.26
SOX2-OT-233ENST00000600778 SEMA6BQ9H3T3 888 aa13.42□□□□□ -0.26
SOX2-OT-233ENST00000600778 TRMT13Q9NUP7 481 aaKnown RBP13.42□□□□□ -0.26
SOX2-OT-233ENST00000600778 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.41□□□□□ -0.26
SOX2-OT-233ENST00000600778 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.41□□□□□ -0.26
SOX2-OT-233ENST00000600778 CCDC69A6NI79 296 aa13.41□□□□□ -0.26
SOX2-OT-233ENST00000600778 GCOM1H8Y6P7 765 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms