RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 RAB34Q9BZG1 259 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 PCDHA12Q9UN75 941 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 KIAA1024Q9UPX6 916 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 CHMP2AO43633 222 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 GH2P01242 217 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 IRF2BP1Q8IU81 584 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 P2RX5Q93086 422 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 CCSER1Q9C0I3 900 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 PNMA6FA0A0J9YX94 578 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 CCDC66A2RUB6 948 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 KLRC4O43908 158 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 NCAPH2Q6IBW4 605 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 TMCO3Q6UWJ1 677 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 CCDC155Q8N6L0 562 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 PANX2Q96RD6 677 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 PSMB7Q99436 277 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 MMTAG2Q9BU76 263 aaKnown RBP12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 KBTBD4Q9NVX7 518 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 ZNHIT6Q9NWK9 470 aaKnown RBP12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 PKD2L1Q9P0L9 805 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 ROBO3Q96MS0 1386 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 PHLPP2Q6ZVD8 1323 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 CLCN6P51797 869 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 NAP1L1P55209 391 aaKnown RBP12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 CDC37Q16543 378 aaPredicted RBP12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 MIGA2Q7L4E1 593 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 MB21D1Q8N884 522 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 NOC3LQ8WTT2 800 aaKnown RBP12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 DDX12PQ92771 950 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 DEF6Q9H4E7 631 aa12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 ZBTB12Q9Y330 459 aaPredicted RBP12.87□□□□□ -0.35
ARHGEF1-220ENST00000600274 POTEB3A0JP26 581 aa12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 GOLGA6L9A6NEM1 432 aa12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 POTECB2RU33 542 aa12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 GRB10Q13322 594 aa12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 FKBP15Q5T1M5 1219 aa12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 CCDC174Q6PII3 467 aa12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 TMED8Q6PL24 325 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 POTEBQ6S5H4 581 aa12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 CYP26C1Q6V0L0 522 aa12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 C15orf52Q6ZUT6 534 aaKnown RBP12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 DAGLBQ8NCG7 672 aa12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 CSRNP1Q96S65 589 aa12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 RIOX1Q9H6W3 641 aa12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 ARGLU1Q9NWB6 273 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 LIMA1Q9UHB6 759 aaKnown RBP12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 TRAF5O00463 557 aa12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 ZBTB5O15062 677 aa12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 CCDC40Q4G0X9 1142 aa12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 RBM26Q5T8P6 1007 aaKnown RBP12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 GIMAP8Q8ND71 665 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 SMCR8Q8TEV9 937 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 FAM163AQ96GL9 167 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 NLRC4Q9NPP4 1024 aa12.86□□□□□ -0.35
ARHGEF1-220ENST00000600274 CCDC88AQ3V6T2 1871 aa12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 CCDC122Q5T0U0 273 aa12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 CNNM4Q6P4Q7 775 aa12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 ANKRD13CQ8N6S4 541 aa12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 DNAJC18Q9H819 358 aa12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 L2HGDHQ9H9P8 463 aa12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 CTAGE9A4FU28 777 aa12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 LAD1O00515 517 aa12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 RHOBTB3O94955 611 aa12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 ABCB5Q2M3G0 1257 aa12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 HERC4Q5GLZ8 1057 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 KRT26Q7Z3Y9 468 aa12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 TMTC1Q8IUR5 882 aa12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 KIAA0895Q8NCT3 520 aa12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 OR8K1Q8NGG5 319 aa12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 PDGFDQ9GZP0 370 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 HDAC6Q9UBN7 1215 aa12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 EPN1Q9Y6I3 576 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 CFBP00751 764 aa12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 CCNE1P24864 410 aa12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 GABPAQ06546 454 aa12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 ECM1Q16610 540 aa12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 AK8Q96MA6 479 aa12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 DUSP9Q99956 384 aaKnown RBP12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF1-220ENST00000600274 POTEFA5A3E0 1075 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 LGALS16A8MUM7 142 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 F5H6K3 240 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 SRGAP2O75044 1071 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 POTEIP0CG38 1075 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 KLRC3Q07444 240 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 PABPC4Q13310 644 aaKnown RBP eCLIP12.84□□□□□ -0.351e-7■■■■□ 20.6
ARHGEF1-220ENST00000600274 TDRD12Q587J7 1177 aaKnown RBP12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 TTI2Q6NXR4 508 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 POTEGQ6S5H5 508 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 POTEEQ6S8J3 1075 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 NEK11Q8NG66 645 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 PNMA5Q96PV4 448 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 ZCCHC17Q9NP64 241 aaKnown RBP12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 DDX41Q9UJV9 622 aaKnown RBP12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 BICDL2A1A5D9 508 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 SPDYE3A6NKU9 549 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 KCNJ6P48051 423 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 GYS2P54840 703 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 EN1Q05925 392 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 CACNA2D4Q7Z3S7 1137 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms