RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 OR6J1Q8NGC5 347 aa16■□□□□ 0.15
SCAF1-203ENST00000598359 MTMR8Q96EF0 704 aa16■□□□□ 0.15
SCAF1-203ENST00000598359 GUCD1Q96NT3 240 aa16■□□□□ 0.15
SCAF1-203ENST00000598359 PIGSQ96S52 555 aa16■□□□□ 0.15
SCAF1-203ENST00000598359 AMNQ9BXJ7 453 aa16■□□□□ 0.15
SCAF1-203ENST00000598359 TBX21Q9UL17 535 aa16■□□□□ 0.15
SCAF1-203ENST00000598359 LOC102724159A0A0B4J2E5 919 aa15.99■□□□□ 0.15
SCAF1-203ENST00000598359 ZBTB5O15062 677 aa15.99■□□□□ 0.15
SCAF1-203ENST00000598359 PRC1O43663 620 aa15.99■□□□□ 0.15
SCAF1-203ENST00000598359 CYTH3O43739 400 aa15.99■□□□□ 0.15
SCAF1-203ENST00000598359 EIF2AK2P19525 551 aaKnown RBP15.99■□□□□ 0.15
SCAF1-203ENST00000598359 SART3Q15020 963 aaKnown RBP15.99■□□□□ 0.15
SCAF1-203ENST00000598359 PWP2Q15269 919 aaKnown RBP15.99■□□□□ 0.15
SCAF1-203ENST00000598359 BMP2KLQ5H9B9 411 aa15.99■□□□□ 0.15
SCAF1-203ENST00000598359 CREB3L3Q68CJ9 461 aa15.99■□□□□ 0.15
SCAF1-203ENST00000598359 MCF2L2Q86YR7 1114 aa15.99■□□□□ 0.15
SCAF1-203ENST00000598359 FAM126BQ8IXS8 530 aa15.99■□□□□ 0.15
SCAF1-203ENST00000598359 RMDN3Q96TC7 470 aa15.99■□□□□ 0.15
SCAF1-203ENST00000598359 LY9Q9HBG7 655 aa15.99■□□□□ 0.15
SCAF1-203ENST00000598359 Q9Y3F1 56 aa15.99■□□□□ 0.15
SCAF1-203ENST00000598359 PCDHA1Q9Y5I3 950 aa15.99■□□□□ 0.15
SCAF1-203ENST00000598359 MROH7Q68CQ1 1323 aa15.98■□□□□ 0.15
SCAF1-203ENST00000598359 MYH6P13533 1939 aa15.98■□□□□ 0.15
SCAF1-203ENST00000598359 ZEB2O60315 1214 aa15.98■□□□□ 0.15
SCAF1-203ENST00000598359 MYL3P08590 195 aa15.98■□□□□ 0.15
SCAF1-203ENST00000598359 TXNP10599 105 aaKnown RBP15.98■□□□□ 0.15
SCAF1-203ENST00000598359 HOXA13P31271 388 aaPredicted RBP15.98■□□□□ 0.15
SCAF1-203ENST00000598359 ITGA7Q13683 1181 aa15.98■□□□□ 0.15
SCAF1-203ENST00000598359 PPP2R5BQ15173 497 aa15.98■□□□□ 0.15
SCAF1-203ENST00000598359 SEPT14Q6ZU15 432 aa15.98■□□□□ 0.15
SCAF1-203ENST00000598359 CATIPQ7Z7H3 387 aa15.98■□□□□ 0.15
SCAF1-203ENST00000598359 RAB11FIP4Q86YS3 637 aa15.98■□□□□ 0.15
SCAF1-203ENST00000598359 SLC43A3Q8NBI5 491 aa15.98■□□□□ 0.15
SCAF1-203ENST00000598359 SCFD2Q8WU76 684 aa15.98■□□□□ 0.15
SCAF1-203ENST00000598359 MPHOSPH6Q99547 160 aaKnown RBP15.98■□□□□ 0.15
SCAF1-203ENST00000598359 LRRC2Q9BYS8 371 aa15.98■□□□□ 0.15
SCAF1-203ENST00000598359 PPP1R12CQ9BZL4 782 aa15.98■□□□□ 0.15
SCAF1-203ENST00000598359 TRPV6Q9H1D0 765 aa15.98■□□□□ 0.15
SCAF1-203ENST00000598359 RIOX1Q9H6W3 641 aa15.98■□□□□ 0.15
SCAF1-203ENST00000598359 MUC3AQ02505 3323 aa15.97■□□□□ 0.15
SCAF1-203ENST00000598359 CABYRO75952 493 aa15.97■□□□□ 0.15
SCAF1-203ENST00000598359 TIMP1P01033 207 aa15.97■□□□□ 0.15
SCAF1-203ENST00000598359 CD4P01730 458 aa15.97■□□□□ 0.15
SCAF1-203ENST00000598359 FPGSQ05932 587 aa15.97■□□□□ 0.15
SCAF1-203ENST00000598359 NECTIN1Q15223 517 aa15.97■□□□□ 0.15
SCAF1-203ENST00000598359 LY6KQ17RY6 165 aa15.97■□□□□ 0.15
SCAF1-203ENST00000598359 ARHGEF16Q5VV41 709 aa15.97■□□□□ 0.15
SCAF1-203ENST00000598359 FAM109BQ6ICB4 259 aaPredicted RBP15.97■□□□□ 0.15
SCAF1-203ENST00000598359 CASC1Q6TDU7 716 aa15.97■□□□□ 0.15
SCAF1-203ENST00000598359 ZNF654Q8IZM8 581 aa15.97■□□□□ 0.15
SCAF1-203ENST00000598359 NSUN6Q8TEA1 469 aaKnown RBP15.97■□□□□ 0.15
SCAF1-203ENST00000598359 FAM161BQ96MY7 647 aa15.97■□□□□ 0.15
SCAF1-203ENST00000598359 TTC28Q96AY4 2481 aa15.97■□□□□ 0.15
SCAF1-203ENST00000598359 UMODL1Q5DID0 1318 aa15.96■□□□□ 0.15
SCAF1-203ENST00000598359 SH2B2O14492 632 aaPredicted RBP15.96■□□□□ 0.15
SCAF1-203ENST00000598359 TLR3O15455 904 aaKnown RBP15.96■□□□□ 0.15
SCAF1-203ENST00000598359 RXRAP19793 462 aa15.96■□□□□ 0.15
SCAF1-203ENST00000598359 CYP2C18P33260 490 aa15.96■□□□□ 0.15
SCAF1-203ENST00000598359 HSD17B4P51659 736 aa15.96■□□□□ 0.15
SCAF1-203ENST00000598359 PURAQ00577 322 aaKnown RBP15.96■□□□□ 0.15
SCAF1-203ENST00000598359 NFXL1Q6ZNB6 911 aa15.96■□□□□ 0.15
SCAF1-203ENST00000598359 ZFP91Q96JP5 570 aaPredicted RBP15.96■□□□□ 0.15
SCAF1-203ENST00000598359 PXMP2Q9NR77 195 aa15.96■□□□□ 0.15
SCAF1-203ENST00000598359 CDH23Q9H251 3354 aa15.96■□□□□ 0.15
SCAF1-203ENST00000598359 BAZ2BQ9UIF8 2168 aaKnown RBP15.96■□□□□ 0.14
SCAF1-203ENST00000598359 B4DLN1 442 aa15.95■□□□□ 0.14
SCAF1-203ENST00000598359 B4GALT4O60513 344 aa15.95■□□□□ 0.14
SCAF1-203ENST00000598359 PLEKHA8P1O95397 391 aa15.95■□□□□ 0.14
SCAF1-203ENST00000598359 NR3C2P08235 984 aa15.95■□□□□ 0.14
SCAF1-203ENST00000598359 MYCLP12524 364 aaPredicted RBP15.95■□□□□ 0.14
SCAF1-203ENST00000598359 CSF2RAP15509 400 aa15.95■□□□□ 0.14
SCAF1-203ENST00000598359 MCM5P33992 734 aa15.95■□□□□ 0.14
SCAF1-203ENST00000598359 CPT1AP50416 773 aa15.95■□□□□ 0.14
SCAF1-203ENST00000598359 MRPL12P52815 198 aaKnown RBP15.95■□□□□ 0.14
SCAF1-203ENST00000598359 CHMP4BP1P59074 171 aa15.95■□□□□ 0.14
SCAF1-203ENST00000598359 TTLL4Q14679 1199 aa15.95■□□□□ 0.14
SCAF1-203ENST00000598359 STXBP2Q15833 593 aa15.95■□□□□ 0.14
SCAF1-203ENST00000598359 CCDC62Q6P9F0 684 aa15.95■□□□□ 0.14
SCAF1-203ENST00000598359 CMTR1Q8N1G2 835 aaKnown RBP15.95■□□□□ 0.14
SCAF1-203ENST00000598359 IL31RAQ8NI17 732 aa15.95■□□□□ 0.14
SCAF1-203ENST00000598359 POLR3EQ9NVU0 708 aa15.95■□□□□ 0.14
SCAF1-203ENST00000598359 PNMA6FA0A0J9YX94 578 aa15.94■□□□□ 0.14
SCAF1-203ENST00000598359 NKRFO15226 690 aaKnown RBP eCLIP15.94■□□□□ 0.14
SCAF1-203ENST00000598359 SORBS3O60504 671 aa15.94■□□□□ 0.14
SCAF1-203ENST00000598359 ACRP10323 421 aa15.94■□□□□ 0.14
SCAF1-203ENST00000598359 MFSD5Q6N075 450 aa15.94■□□□□ 0.14
SCAF1-203ENST00000598359 C16orf59Q7L2K0 433 aa15.94■□□□□ 0.14
SCAF1-203ENST00000598359 FCHSD1Q86WN1 690 aa15.94■□□□□ 0.14
SCAF1-203ENST00000598359 CTCFLQ8NI51 663 aaPredicted RBP15.94■□□□□ 0.14
SCAF1-203ENST00000598359 AFG1LQ8WV93 481 aa15.94■□□□□ 0.14
SCAF1-203ENST00000598359 RNPC3Q96LT9 517 aaKnown RBP15.94■□□□□ 0.14
SCAF1-203ENST00000598359 TCEANC2Q96MN5 208 aa15.94■□□□□ 0.14
SCAF1-203ENST00000598359 IWS1Q96ST2 819 aa15.94■□□□□ 0.14
SCAF1-203ENST00000598359 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.94■□□□□ 0.144e-7■□□□□ 9
SCAF1-203ENST00000598359 TRMT13Q9NUP7 481 aaKnown RBP15.94■□□□□ 0.14
SCAF1-203ENST00000598359 hCG_1642624A0A1W2PR95 340 aa15.93■□□□□ 0.14
SCAF1-203ENST00000598359 CCDC69A6NI79 296 aa15.93■□□□□ 0.14
SCAF1-203ENST00000598359 A6NJR5 290 aa15.93■□□□□ 0.14
SCAF1-203ENST00000598359 CDC45O75419 566 aa15.93■□□□□ 0.14
SCAF1-203ENST00000598359 DDAH1O94760 285 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms