RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 SGMS1Q86VZ5 419 aa17.87■□□□□ 0.45
XRCC1-206ENST00000597811 CMTR1Q8N1G2 835 aaKnown RBP17.87■□□□□ 0.45
XRCC1-206ENST00000597811 FANCBQ8NB91 859 aa17.87■□□□□ 0.45
XRCC1-206ENST00000597811 PCSK9Q8NBP7 692 aaKnown RBP17.87■□□□□ 0.45
XRCC1-206ENST00000597811 BRF1Q92994 677 aa17.87■□□□□ 0.45
XRCC1-206ENST00000597811 RRP36Q96EU6 259 aaKnown RBP17.87■□□□□ 0.45
XRCC1-206ENST00000597811 ADD3Q9UEY8 706 aaKnown RBP17.87■□□□□ 0.45
XRCC1-206ENST00000597811 SEC63Q9UGP8 760 aaKnown RBP17.87■□□□□ 0.45
XRCC1-206ENST00000597811 GTF3C3Q9Y5Q9 886 aa17.87■□□□□ 0.45
XRCC1-206ENST00000597811 KIAA1217Q5T5P2 1943 aa17.87■□□□□ 0.45
XRCC1-206ENST00000597811 CDH23Q9H251 3354 aa17.87■□□□□ 0.45
XRCC1-206ENST00000597811 GOLGA8AA7E2F4 631 aa17.86■□□□□ 0.45
XRCC1-206ENST00000597811 GOLGA8BA8MQT2 603 aa17.86■□□□□ 0.45
XRCC1-206ENST00000597811 PLEKHA8P1O95397 391 aa17.86■□□□□ 0.45
XRCC1-206ENST00000597811 CLTBP09497 229 aa17.86■□□□□ 0.45
XRCC1-206ENST00000597811 ITGB8P26012 769 aa17.86■□□□□ 0.45
XRCC1-206ENST00000597811 NKX3-2P78367 333 aa17.86■□□□□ 0.45
XRCC1-206ENST00000597811 APOBRQ0VD83 1088 aa17.86■□□□□ 0.45
XRCC1-206ENST00000597811 TRAF1Q13077 416 aa17.86■□□□□ 0.45
XRCC1-206ENST00000597811 NOL8Q76FK4 1167 aaKnown RBP17.86■□□□□ 0.45
XRCC1-206ENST00000597811 RUFY3Q7L099 469 aa17.86■□□□□ 0.45
XRCC1-206ENST00000597811 TLK2Q86UE8 772 aa17.86■□□□□ 0.45
XRCC1-206ENST00000597811 BADQ92934 168 aa17.86■□□□□ 0.45
XRCC1-206ENST00000597811 GLT1D1Q96MS3 346 aa17.86■□□□□ 0.45
XRCC1-206ENST00000597811 RIOX1Q9H6W3 641 aa17.86■□□□□ 0.45
XRCC1-206ENST00000597811 VTA1Q9NP79 307 aa17.86■□□□□ 0.45
XRCC1-206ENST00000597811 BRPF3Q9ULD4 1205 aa17.86■□□□□ 0.45
XRCC1-206ENST00000597811 PCDHA1Q9Y5I3 950 aa17.86■□□□□ 0.45
XRCC1-206ENST00000597811 PNMA6FA0A0J9YX94 578 aa17.85■□□□□ 0.45
XRCC1-206ENST00000597811 ELP1O95163 1332 aa17.85■□□□□ 0.45
XRCC1-206ENST00000597811 RTN1Q16799 776 aa17.85■□□□□ 0.45
XRCC1-206ENST00000597811 ANKRD33Q7Z3H0 272 aa17.85■□□□□ 0.45
XRCC1-206ENST00000597811 MCF2L2Q86YR7 1114 aa17.85■□□□□ 0.45
XRCC1-206ENST00000597811 UPF3BQ9BZI7 483 aaKnown RBP17.85■□□□□ 0.45
XRCC1-206ENST00000597811 RBM28Q9NW13 759 aaKnown RBP17.85■□□□□ 0.45
XRCC1-206ENST00000597811 LOC102724159A0A0B4J2E5 919 aa17.84■□□□□ 0.45
XRCC1-206ENST00000597811 CYTH3O43739 400 aa17.84■□□□□ 0.45
XRCC1-206ENST00000597811 CFBP00751 764 aa17.84■□□□□ 0.45
XRCC1-206ENST00000597811 METAP2P50579 478 aaKnown RBP eCLIP17.84■□□□□ 0.45
XRCC1-206ENST00000597811 FAAP100Q0VG06 881 aa17.84■□□□□ 0.45
XRCC1-206ENST00000597811 PWP2Q15269 919 aaKnown RBP17.84■□□□□ 0.45
XRCC1-206ENST00000597811 IQSEC1Q6DN90 963 aa17.84■□□□□ 0.45
XRCC1-206ENST00000597811 TOX2Q96NM4 488 aa17.84■□□□□ 0.45
XRCC1-206ENST00000597811 MPHOSPH6Q99547 160 aaKnown RBP17.84■□□□□ 0.45
XRCC1-206ENST00000597811 SPZ1Q9BXG8 430 aa17.84■□□□□ 0.45
XRCC1-206ENST00000597811 ZSWIM6Q9HCJ5 1215 aa17.84■□□□□ 0.45
XRCC1-206ENST00000597811 KIAA0355O15063 1070 aa17.83■□□□□ 0.44
XRCC1-206ENST00000597811 DYNC1LI2O43237 492 aaPredicted RBP17.83■□□□□ 0.44
XRCC1-206ENST00000597811 EDNRBP24530 442 aa17.83■□□□□ 0.44
XRCC1-206ENST00000597811 CDK7P50613 346 aa17.83■□□□□ 0.44
XRCC1-206ENST00000597811 FSCN1Q16658 493 aaKnown RBP17.83■□□□□ 0.44
XRCC1-206ENST00000597811 SRBD1Q8N5C6 995 aaKnown RBP17.83■□□□□ 0.44
XRCC1-206ENST00000597811 RGS22Q8NE09 1264 aa17.83■□□□□ 0.44
XRCC1-206ENST00000597811 DNERQ8NFT8 737 aa17.83■□□□□ 0.44
XRCC1-206ENST00000597811 TBC1D5Q92609 795 aa17.83■□□□□ 0.44
XRCC1-206ENST00000597811 MTMR8Q96EF0 704 aa17.83■□□□□ 0.44
XRCC1-206ENST00000597811 AP5M1Q9H0R1 490 aa17.83■□□□□ 0.44
XRCC1-206ENST00000597811 PDRG1Q9NUG6 133 aa17.83■□□□□ 0.44
XRCC1-206ENST00000597811 A0A0U1RQG5 324 aaPredicted RBP17.82■□□□□ 0.44
XRCC1-206ENST00000597811 hCG_1642624A0A1W2PR95 340 aa17.82■□□□□ 0.44
XRCC1-206ENST00000597811 DCDC2CA8MYV0 355 aa17.82■□□□□ 0.44
XRCC1-206ENST00000597811 PPP1R11O60927 126 aaPredicted RBP17.82■□□□□ 0.44
XRCC1-206ENST00000597811 SEC24BO95487 1268 aa17.82■□□□□ 0.44
XRCC1-206ENST00000597811 SMARCA1P28370 1054 aa17.82■□□□□ 0.44
XRCC1-206ENST00000597811 SLC35G1Q2M3R5 365 aa17.82■□□□□ 0.44
XRCC1-206ENST00000597811 CXCL17Q6UXB2 119 aa17.82■□□□□ 0.44
XRCC1-206ENST00000597811 TMTC3Q6ZXV5 915 aa17.82■□□□□ 0.44
XRCC1-206ENST00000597811 VTI1AQ96AJ9 217 aa17.82■□□□□ 0.44
XRCC1-206ENST00000597811 WDR11Q9BZH6 1224 aa17.82■□□□□ 0.44
XRCC1-206ENST00000597811 TM6SF1Q9BZW5 370 aa17.82■□□□□ 0.44
XRCC1-206ENST00000597811 TMEM39AQ9NV64 488 aa17.82■□□□□ 0.44
XRCC1-206ENST00000597811 Q9Y3F1 56 aa17.82■□□□□ 0.44
XRCC1-206ENST00000597811 MYH7BA7E2Y1 1941 aa17.82■□□□□ 0.44
XRCC1-206ENST00000597811 MROH7Q68CQ1 1323 aa17.81■□□□□ 0.44
XRCC1-206ENST00000597811 CCDC196A0A1B0GTZ2 297 aa17.81■□□□□ 0.44
XRCC1-206ENST00000597811 RBM47A0AV96 593 aaKnown RBP17.81■□□□□ 0.44
XRCC1-206ENST00000597811 B4DLN1 442 aa17.81■□□□□ 0.44
XRCC1-206ENST00000597811 ARVCFO00192 962 aa17.81■□□□□ 0.44
XRCC1-206ENST00000597811 MRPL12P52815 198 aaKnown RBP17.81■□□□□ 0.44
XRCC1-206ENST00000597811 PDE4DQ08499 809 aa17.81■□□□□ 0.44
XRCC1-206ENST00000597811 SHHQ15465 462 aa17.81■□□□□ 0.44
XRCC1-206ENST00000597811 DUSP28Q4G0W2 176 aa17.81■□□□□ 0.44
XRCC1-206ENST00000597811 C9orf50Q5SZB4 431 aa17.81■□□□□ 0.44
XRCC1-206ENST00000597811 GPR153Q6NV75 609 aa17.81■□□□□ 0.44
XRCC1-206ENST00000597811 LARP6Q9BRS8 491 aaKnown RBP17.81■□□□□ 0.44
XRCC1-206ENST00000597811 COL20A1Q9P218 1284 aa17.81■□□□□ 0.44
XRCC1-206ENST00000597811 SCN10AQ9Y5Y9 1956 aa17.8■□□□□ 0.44
XRCC1-206ENST00000597811 RAG1P15918 1043 aa17.8■□□□□ 0.44
XRCC1-206ENST00000597811 ANAPC15P60006 121 aa17.8■□□□□ 0.44
XRCC1-206ENST00000597811 FAM126BQ8IXS8 530 aa17.8■□□□□ 0.44
XRCC1-206ENST00000597811 SYTL5Q8TDW5 730 aaPredicted RBP17.8■□□□□ 0.44
XRCC1-206ENST00000597811 TBX21Q9UL17 535 aa17.8■□□□□ 0.44
XRCC1-206ENST00000597811 GCOM1H8Y6P7 765 aaPredicted RBP17.79■□□□□ 0.44
XRCC1-206ENST00000597811 OPLAHO14841 1288 aa17.79■□□□□ 0.44
XRCC1-206ENST00000597811 CABYRO75952 493 aa17.79■□□□□ 0.44
XRCC1-206ENST00000597811 POLR2MP0CAP2 368 aa17.79■□□□□ 0.44
XRCC1-206ENST00000597811 EPHB4P54760 987 aa17.79■□□□□ 0.44
XRCC1-206ENST00000597811 CCT2P78371 535 aaKnown RBP17.79■□□□□ 0.44
XRCC1-206ENST00000597811 PPP2R5BQ15173 497 aa17.79■□□□□ 0.44
XRCC1-206ENST00000597811 C8orf34Q49A92 452 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms