RNA–Protein interactions for RNA: ENST00000597704.1

KHSRP-209, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 5

Gene KHSRP, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-209ENST00000597704 RMDN3Q96TC7 470 aa18.42■□□□□ 0.54
KHSRP-209ENST00000597704 MPHOSPH6Q99547 160 aaKnown RBP18.42■□□□□ 0.54
KHSRP-209ENST00000597704 LZTS2Q9BRK4 669 aa18.42■□□□□ 0.54
KHSRP-209ENST00000597704 AP5M1Q9H0R1 490 aa18.42■□□□□ 0.54
KHSRP-209ENST00000597704 PDLIM7Q9NR12 457 aa18.42■□□□□ 0.54
KHSRP-209ENST00000597704 ELP1O95163 1332 aa18.42■□□□□ 0.54
KHSRP-209ENST00000597704 A0A1W2PPC1 479 aa18.41■□□□□ 0.54
KHSRP-209ENST00000597704 CALM1P0DP23 149 aa18.41■□□□□ 0.54
KHSRP-209ENST00000597704 CALM2P0DP24 149 aa18.41■□□□□ 0.54
KHSRP-209ENST00000597704 CALM3P0DP25 149 aa18.41■□□□□ 0.54
KHSRP-209ENST00000597704 GNAQP50148 359 aa18.41■□□□□ 0.54
KHSRP-209ENST00000597704 TRAF1Q13077 416 aa18.41■□□□□ 0.54
KHSRP-209ENST00000597704 FSCN1Q16658 493 aaKnown RBP18.41■□□□□ 0.54
KHSRP-209ENST00000597704 SAMD3Q8N6K7 520 aa18.41■□□□□ 0.54
KHSRP-209ENST00000597704 PIBF1Q8WXW3 757 aa18.41■□□□□ 0.54
KHSRP-209ENST00000597704 GLT1D1Q96MS3 346 aa18.41■□□□□ 0.54
KHSRP-209ENST00000597704 IWS1Q96ST2 819 aa18.41■□□□□ 0.54
KHSRP-209ENST00000597704 MAP3K20Q9NYL2 800 aaKnown RBP18.41■□□□□ 0.54
KHSRP-209ENST00000597704 SLC12A7Q9Y666 1083 aa18.41■□□□□ 0.54
KHSRP-209ENST00000597704 EIF2AK2P19525 551 aaKnown RBP18.4■□□□□ 0.54
KHSRP-209ENST00000597704 APOA5Q6Q788 366 aa18.4■□□□□ 0.54
KHSRP-209ENST00000597704 ANKRD33Q7Z3H0 272 aa18.4■□□□□ 0.54
KHSRP-209ENST00000597704 SH3RF1Q7Z6J0 888 aa18.4■□□□□ 0.54
KHSRP-209ENST00000597704 SCFD2Q8WU76 684 aa18.4■□□□□ 0.54
KHSRP-209ENST00000597704 PXMP2Q9NR77 195 aa18.4■□□□□ 0.54
KHSRP-209ENST00000597704 SNX14Q9Y5W7 946 aa18.4■□□□□ 0.54
KHSRP-209ENST00000597704 MYO9BQ13459 2157 aa18.4■□□□□ 0.54
KHSRP-209ENST00000597704 LAMA3Q16787 3333 aa18.39■□□□□ 0.54
KHSRP-209ENST00000597704 KAT6AQ92794 2004 aa18.39■□□□□ 0.53
KHSRP-209ENST00000597704 A0A0U1RQG5 324 aaPredicted RBP18.39■□□□□ 0.53
KHSRP-209ENST00000597704 TRIM43BA6NCK2 446 aa18.39■□□□□ 0.53
KHSRP-209ENST00000597704 PQBP1O60828 265 aaKnown RBP18.39■□□□□ 0.53
KHSRP-209ENST00000597704 REC8O95072 547 aa18.39■□□□□ 0.53
KHSRP-209ENST00000597704 ARIH2O95376 493 aa18.39■□□□□ 0.53
KHSRP-209ENST00000597704 HOXA13P31271 388 aaPredicted RBP18.39■□□□□ 0.53
KHSRP-209ENST00000597704 CDK7P50613 346 aa18.39■□□□□ 0.53
KHSRP-209ENST00000597704 MDM2Q00987 491 aaPredicted RBP18.39■□□□□ 0.53
KHSRP-209ENST00000597704 ARHGEF16Q5VV41 709 aa18.39■□□□□ 0.53
KHSRP-209ENST00000597704 CXCL17Q6UXB2 119 aa18.39■□□□□ 0.53
KHSRP-209ENST00000597704 TMTC3Q6ZXV5 915 aa18.39■□□□□ 0.53
KHSRP-209ENST00000597704 MICU3Q86XE3 530 aa18.39■□□□□ 0.53
KHSRP-209ENST00000597704 CMTR1Q8N1G2 835 aaKnown RBP18.39■□□□□ 0.53
KHSRP-209ENST00000597704 FANCBQ8NB91 859 aa18.39■□□□□ 0.53
KHSRP-209ENST00000597704 TRIM43Q96BQ3 446 aaPredicted RBP18.39■□□□□ 0.53
KHSRP-209ENST00000597704 RRP36Q96EU6 259 aaKnown RBP18.39■□□□□ 0.53
KHSRP-209ENST00000597704 TOX2Q96NM4 488 aa18.39■□□□□ 0.53
KHSRP-209ENST00000597704 BRPF3Q9ULD4 1205 aa18.39■□□□□ 0.53
KHSRP-209ENST00000597704 NKRFO15226 690 aaKnown RBP eCLIP18.38■□□□□ 0.53
KHSRP-209ENST00000597704 NR3C2P08235 984 aa18.38■□□□□ 0.53
KHSRP-209ENST00000597704 CLTBP09497 229 aa18.38■□□□□ 0.53
KHSRP-209ENST00000597704 PPP2R5BQ15173 497 aa18.38■□□□□ 0.53
KHSRP-209ENST00000597704 STXBP2Q15833 593 aa18.38■□□□□ 0.53
KHSRP-209ENST00000597704 CCDC62Q6P9F0 684 aa18.38■□□□□ 0.53
KHSRP-209ENST00000597704 COPS5Q92905 334 aa18.38■□□□□ 0.53
KHSRP-209ENST00000597704 PDCD2LQ9BRP1 358 aa18.38■□□□□ 0.53
KHSRP-209ENST00000597704 PRDM5Q9NQX1 630 aaPredicted RBP18.38■□□□□ 0.53
KHSRP-209ENST00000597704 PRKAG2Q9UGJ0 569 aa18.38■□□□□ 0.53
KHSRP-209ENST00000597704 SZT2Q5T011 3432 aa18.37■□□□□ 0.53
KHSRP-209ENST00000597704 GCOM1H8Y6P7 765 aaPredicted RBP18.37■□□□□ 0.53
KHSRP-209ENST00000597704 ARVCFO00192 962 aa18.37■□□□□ 0.53
KHSRP-209ENST00000597704 EPB41L2O43491 1005 aaKnown RBP18.37■□□□□ 0.53
KHSRP-209ENST00000597704 ZEB2O60315 1214 aa18.37■□□□□ 0.53
KHSRP-209ENST00000597704 CABYRO75952 493 aa18.37■□□□□ 0.53
KHSRP-209ENST00000597704 HMGB1P09429 215 aaKnown RBP18.37■□□□□ 0.53
KHSRP-209ENST00000597704 POLR2MP0CAP2 368 aa18.37■□□□□ 0.53
KHSRP-209ENST00000597704 TXNP10599 105 aaKnown RBP18.37■□□□□ 0.53
KHSRP-209ENST00000597704 CPA1P15085 419 aa18.37■□□□□ 0.53
KHSRP-209ENST00000597704 FAAP100Q0VG06 881 aa18.37■□□□□ 0.53
KHSRP-209ENST00000597704 TTLL4Q14679 1199 aa18.37■□□□□ 0.53
KHSRP-209ENST00000597704 SLC43A3Q8NBI5 491 aa18.37■□□□□ 0.53
KHSRP-209ENST00000597704 OR6J1Q8NGC5 347 aa18.37■□□□□ 0.53
KHSRP-209ENST00000597704 VTI1AQ96AJ9 217 aa18.37■□□□□ 0.53
KHSRP-209ENST00000597704 UBE2OQ9C0C9 1292 aaKnown RBP18.37■□□□□ 0.53
KHSRP-209ENST00000597704 KIAA0355O15063 1070 aa18.36■□□□□ 0.53
KHSRP-209ENST00000597704 GRIN2DO15399 1336 aa18.36■□□□□ 0.53
KHSRP-209ENST00000597704 EIF3JO75822 258 aaKnown RBP18.36■□□□□ 0.53
KHSRP-209ENST00000597704 ITGB8P26012 769 aa18.36■□□□□ 0.53
KHSRP-209ENST00000597704 FRMPD4Q14CM0 1322 aa18.36■□□□□ 0.53
KHSRP-209ENST00000597704 SYNE3Q6ZMZ3 975 aa18.36■□□□□ 0.53
KHSRP-209ENST00000597704 SEPT14Q6ZU15 432 aa18.36■□□□□ 0.53
KHSRP-209ENST00000597704 IL31RAQ8NI17 732 aa18.36■□□□□ 0.53
KHSRP-209ENST00000597704 JAKMIP1Q96N16 626 aaKnown RBP18.36■□□□□ 0.53
KHSRP-209ENST00000597704 LBHD1Q9BQE6 289 aaPredicted RBP18.36■□□□□ 0.53
KHSRP-209ENST00000597704 SEC63Q9UGP8 760 aaKnown RBP18.36■□□□□ 0.53
KHSRP-209ENST00000597704 SCN5AQ14524 2016 aa18.35■□□□□ 0.53
KHSRP-209ENST00000597704 MROH7Q68CQ1 1323 aa18.35■□□□□ 0.53
KHSRP-209ENST00000597704 CNTNAP5Q8WYK1 1306 aa18.35■□□□□ 0.53
KHSRP-209ENST00000597704 DCDC2CA8MYV0 355 aa18.35■□□□□ 0.53
KHSRP-209ENST00000597704 ZBTB43O43298 467 aa18.35■□□□□ 0.53
KHSRP-209ENST00000597704 RGS20O76081 388 aa18.35■□□□□ 0.53
KHSRP-209ENST00000597704 FUT2Q10981 343 aa18.35■□□□□ 0.53
KHSRP-209ENST00000597704 PGM5Q15124 567 aa18.35■□□□□ 0.53
KHSRP-209ENST00000597704 VSIG10LQ86VR7 867 aa18.35■□□□□ 0.53
KHSRP-209ENST00000597704 FCHSD1Q86WN1 690 aa18.35■□□□□ 0.53
KHSRP-209ENST00000597704 FAM126BQ8IXS8 530 aa18.35■□□□□ 0.53
KHSRP-209ENST00000597704 CCDC82Q8N4S0 544 aa18.35■□□□□ 0.53
KHSRP-209ENST00000597704 FAM217BQ9NTX9 383 aaPredicted RBP18.35■□□□□ 0.53
KHSRP-209ENST00000597704 RBM28Q9NW13 759 aaKnown RBP18.35■□□□□ 0.53
KHSRP-209ENST00000597704 TBX21Q9UL17 535 aa18.35■□□□□ 0.53
KHSRP-209ENST00000597704 KLF18A0A0U1RQI7 1052 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms