RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 ZFP91Q96JP5 570 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-207ENST00000595631 PXMP2Q9NR77 195 aa15.89■□□□□ 0.13
SHKBP1-207ENST00000595631 MEIS2O14770 477 aa15.88■□□□□ 0.13
SHKBP1-207ENST00000595631 PRPF3O43395 683 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-207ENST00000595631 MSCO60682 206 aa15.88■□□□□ 0.13
SHKBP1-207ENST00000595631 PFKFB2O60825 505 aa15.88■□□□□ 0.13
SHKBP1-207ENST00000595631 MYCNP04198 464 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-207ENST00000595631 SCG2P13521 617 aa15.88■□□□□ 0.13
SHKBP1-207ENST00000595631 IFNAR1P17181 557 aa15.88■□□□□ 0.13
SHKBP1-207ENST00000595631 NAPAP54920 295 aa15.88■□□□□ 0.13
SHKBP1-207ENST00000595631 ME3Q16798 604 aa15.88■□□□□ 0.13
SHKBP1-207ENST00000595631 PFKFB3Q16875 520 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-207ENST00000595631 GJC2Q5T442 439 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-207ENST00000595631 ARHGEF16Q5VV41 709 aa15.88■□□□□ 0.13
SHKBP1-207ENST00000595631 TAPT1Q6NXT6 567 aa15.88■□□□□ 0.13
SHKBP1-207ENST00000595631 UBE2Q1Q7Z7E8 422 aa15.88■□□□□ 0.13
SHKBP1-207ENST00000595631 NSUN6Q8TEA1 469 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-207ENST00000595631 PAWRQ96IZ0 340 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-207ENST00000595631 BACH2Q9BYV9 841 aa15.88■□□□□ 0.13
SHKBP1-207ENST00000595631 MAF1Q9H063 256 aa15.88■□□□□ 0.13
SHKBP1-207ENST00000595631 SLKQ9H2G2 1235 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-207ENST00000595631 FAM184BQ9ULE4 1060 aa15.88■□□□□ 0.13
SHKBP1-207ENST00000595631 ADAMTS3O15072 1205 aa15.87■□□□□ 0.13
SHKBP1-207ENST00000595631 PGK1P00558 417 aa15.87■□□□□ 0.13
SHKBP1-207ENST00000595631 RARBP10826 455 aa15.87■□□□□ 0.13
SHKBP1-207ENST00000595631 MYCLP12524 364 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-207ENST00000595631 ANKRD1Q15327 319 aa15.87■□□□□ 0.13
SHKBP1-207ENST00000595631 SMARCC2Q8TAQ2 1214 aa15.87■□□□□ 0.13
SHKBP1-207ENST00000595631 PDCD2LQ9BRP1 358 aa15.87■□□□□ 0.13
SHKBP1-207ENST00000595631 PSTPIP2Q9H939 334 aa15.87■□□□□ 0.13
SHKBP1-207ENST00000595631 UPF2Q9HAU5 1272 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-207ENST00000595631 VTA1Q9NP79 307 aa15.87■□□□□ 0.13
SHKBP1-207ENST00000595631 XPNPEP3Q9NQH7 507 aa15.87■□□□□ 0.13
SHKBP1-207ENST00000595631 BARHL2Q9NY43 387 aa15.87■□□□□ 0.13
SHKBP1-207ENST00000595631 SYNRGQ9UMZ2 1314 aa15.87■□□□□ 0.13
SHKBP1-207ENST00000595631 LOC102724159A0A0B4J2E5 919 aa15.86■□□□□ 0.13
SHKBP1-207ENST00000595631 MYADML2A6NDP7 307 aa15.86■□□□□ 0.13
SHKBP1-207ENST00000595631 PIK3CDO00329 1044 aa15.86■□□□□ 0.13
SHKBP1-207ENST00000595631 CPLX1O14810 134 aa15.86■□□□□ 0.13
SHKBP1-207ENST00000595631 NR3C2P08235 984 aa15.86■□□□□ 0.13
SHKBP1-207ENST00000595631 SMPD1P17405 629 aa15.86■□□□□ 0.13
SHKBP1-207ENST00000595631 MLLT1Q03111 559 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-207ENST00000595631 TNFAIP2Q03169 654 aa15.86■□□□□ 0.13
SHKBP1-207ENST00000595631 SSRP1Q08945 709 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-207ENST00000595631 ST3GAL1Q11201 340 aa15.86■□□□□ 0.13
SHKBP1-207ENST00000595631 PGM5Q15124 567 aa15.86■□□□□ 0.13
SHKBP1-207ENST00000595631 PWP2Q15269 919 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-207ENST00000595631 SAMD3Q8N6K7 520 aa15.86■□□□□ 0.13
SHKBP1-207ENST00000595631 CUL5Q93034 780 aa15.86■□□□□ 0.13
SHKBP1-207ENST00000595631 TBC1D32Q96NH3 1257 aa15.86■□□□□ 0.13
SHKBP1-207ENST00000595631 AIFM3Q96NN9 605 aa15.86■□□□□ 0.13
SHKBP1-207ENST00000595631 RNF26Q9BY78 433 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-207ENST00000595631 MAP3K20Q9NYL2 800 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-207ENST00000595631 ADAMTS4O75173 837 aa15.85■□□□□ 0.13
SHKBP1-207ENST00000595631 CTDNEP1O95476 244 aa15.85■□□□□ 0.13
SHKBP1-207ENST00000595631 AKAP17AQ02040 695 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-207ENST00000595631 LRRC41Q15345 812 aa15.85■□□□□ 0.13
SHKBP1-207ENST00000595631 PPP1R18Q6NYC8 613 aa15.85■□□□□ 0.13
SHKBP1-207ENST00000595631 SEPT14Q6ZU15 432 aa15.85■□□□□ 0.13
SHKBP1-207ENST00000595631 ANKLE1Q8NAG6 615 aa15.85■□□□□ 0.13
SHKBP1-207ENST00000595631 GTF3C6Q969F1 213 aa15.85■□□□□ 0.13
SHKBP1-207ENST00000595631 PGBD1Q96JS3 809 aa15.85■□□□□ 0.13
SHKBP1-207ENST00000595631 IWS1Q96ST2 819 aa15.85■□□□□ 0.13
SHKBP1-207ENST00000595631 MPHOSPH6Q99547 160 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-207ENST00000595631 TMEM260Q9NX78 707 aa15.85■□□□□ 0.13
SHKBP1-207ENST00000595631 VPS54Q9P1Q0 977 aa15.85■□□□□ 0.13
SHKBP1-207ENST00000595631 FRMPD4Q14CM0 1322 aa15.85■□□□□ 0.13
SHKBP1-207ENST00000595631 SMCO2A6NFE2 343 aa15.84■□□□□ 0.13
SHKBP1-207ENST00000595631 hCG_1984214I3L0E3 225 aa15.84■□□□□ 0.13
SHKBP1-207ENST00000595631 DUSP11O75319 330 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-207ENST00000595631 ARIH2O95376 493 aa15.84■□□□□ 0.13
SHKBP1-207ENST00000595631 ADCY7P51828 1080 aa15.84■□□□□ 0.13
SHKBP1-207ENST00000595631 STXBP2Q15833 593 aa15.84■□□□□ 0.13
SHKBP1-207ENST00000595631 TRIM22Q8IYM9 498 aa15.84■□□□□ 0.13
SHKBP1-207ENST00000595631 ZNF713Q8N859 430 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-207ENST00000595631 COPS5Q92905 334 aa15.84■□□□□ 0.13
SHKBP1-207ENST00000595631 WDR11Q9BZH6 1224 aa15.84■□□□□ 0.13
SHKBP1-207ENST00000595631 RIC8AQ9NPQ8 531 aa15.84■□□□□ 0.13
SHKBP1-207ENST00000595631 GNEQ9Y223 722 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-207ENST00000595631 TNRC18O15417 2968 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-207ENST00000595631 RBM47A0AV96 593 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-207ENST00000595631 B4DLN1 442 aa15.83■□□□□ 0.12
SHKBP1-207ENST00000595631 DNM1LO00429 736 aa15.83■□□□□ 0.12
SHKBP1-207ENST00000595631 CTAGE5O15320 804 aa15.83■□□□□ 0.12
SHKBP1-207ENST00000595631 COL6A1P12109 1028 aa15.83■□□□□ 0.12
SHKBP1-207ENST00000595631 CCND2P30279 289 aa15.83■□□□□ 0.12
SHKBP1-207ENST00000595631 MRPL12P52815 198 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-207ENST00000595631 BEX3Q00994 111 aa15.83■□□□□ 0.12
SHKBP1-207ENST00000595631 RABEP1Q15276 862 aa15.83■□□□□ 0.12
SHKBP1-207ENST00000595631 IQSEC1Q6DN90 963 aa15.83■□□□□ 0.12
SHKBP1-207ENST00000595631 NECAB2Q7Z6G3 386 aa15.83■□□□□ 0.12
SHKBP1-207ENST00000595631 ARRDC4Q8NCT1 418 aa15.83■□□□□ 0.12
SHKBP1-207ENST00000595631 UPF3AQ9H1J1 476 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-207ENST00000595631 C11orf49Q9H6J7 331 aa15.83■□□□□ 0.12
SHKBP1-207ENST00000595631 RBM27Q9P2N5 1060 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-207ENST00000595631 PCDHA6Q9UN73 950 aa15.83■□□□□ 0.12
SHKBP1-207ENST00000595631 PCDHA8Q9Y5H6 950 aa15.83■□□□□ 0.12
SHKBP1-207ENST00000595631 RGS20O76081 388 aa15.82■□□□□ 0.12
SHKBP1-207ENST00000595631 CD2BP2O95400 341 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-207ENST00000595631 DEXIO95424 95 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms