RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 NKX3-2P78367 333 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 TNFAIP2Q03169 654 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 TBC1D8BQ0IIM8 1120 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 IKBKEQ14164 716 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 COG2Q14746 738 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 TMEM132BQ14DG7 1078 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 CCDC57Q2TAC2 916 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 LRRC24Q50LG9 513 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 KIAA1755Q5JYT7 1200 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 PRR23CQ6ZRP0 262 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 ZNF605Q86T29 641 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 ZNF513Q8N8E2 541 aaPredicted RBP3.85□□□□□ -1.79
VRK3-204ENST00000593912 DDX1Q92499 740 aaKnown RBP3.85□□□□□ -1.79
VRK3-204ENST00000593912 CRELD1Q96HD1 420 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 LRIG1Q96JA1 1093 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 ZFP91Q96JP5 570 aaPredicted RBP3.85□□□□□ -1.79
VRK3-204ENST00000593912 FGD4Q96M96 766 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 DCBLD2Q96PD2 775 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 SCNM1Q9BWG6 230 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 KATNBL1Q9H079 304 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 LMAN2LQ9H0V9 348 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 S1PR5Q9H228 398 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 EPC1Q9H2F5 836 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 TBC1D17Q9HA65 648 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 SEMA4GQ9NTN9 838 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 DLGAP2Q9P1A6 1054 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 HERC5Q9UII4 1024 aaKnown RBP3.85□□□□□ -1.79
VRK3-204ENST00000593912 GMEB2Q9UKD1 530 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 DIS3Q9Y2L1 958 aaKnown RBP3.85□□□□□ -1.79
VRK3-204ENST00000593912 C2CD3Q4AC94 2353 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 FBN3Q75N90 2809 aa3.85□□□□□ -1.79
VRK3-204ENST00000593912 C5orf67F2Z3F1 127 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 J3QKU1 62 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 PER1O15534 1290 aaPredicted RBP3.84□□□□□ -1.79
VRK3-204ENST00000593912 DDX58O95786 925 aaKnown RBP3.84□□□□□ -1.79
VRK3-204ENST00000593912 AMHP03971 560 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 NEFMP07197 916 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 MYL3P08590 195 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 CFHP08603 1231 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 HOXB7P09629 217 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 BMPR1AP36894 532 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 USP14P54578 494 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 CHMP4BP1P59074 171 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 CSTF1Q05048 431 aaKnown RBP3.84□□□□□ -1.79
VRK3-204ENST00000593912 NEXNQ0ZGT2 675 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 BFSP2Q13515 415 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 MBTPS1Q14703 1052 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 RAB3GAP1Q15042 981 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 METTL24Q5JXM2 366 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 KIAA1211LQ6NV74 962 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 SYCE2Q6PIF2 218 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 TSSK4Q6SA08 328 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 MAMDC4Q6UXC1 1216 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 KSR2Q6VAB6 950 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 LRRC8DQ7L1W4 858 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 ARMCX2Q7L311 632 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 DZIP1Q86YF9 867 aaKnown RBP3.84□□□□□ -1.79
VRK3-204ENST00000593912 VGLL2Q8N8G2 317 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 FAM133AQ8N9E0 248 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 FEZF2Q8TBJ5 459 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 ATP8B4Q8TF62 1192 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 ZNF384Q8TF68 577 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 HNRNPLLQ8WVV9 542 aaKnown RBP3.84□□□□□ -1.79
VRK3-204ENST00000593912 ATRIPQ8WXE1 791 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 DHX38Q92620 1227 aaKnown RBP3.84□□□□□ -1.79
VRK3-204ENST00000593912 CTAGE1Q96RT6 745 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 C11orf84Q9BUA3 381 aaPredicted RBP3.84□□□□□ -1.79
VRK3-204ENST00000593912 SLC4A5Q9BY07 1137 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 KIAA1683Q9H0B3 1180 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 ABHD16BQ9H3Z7 469 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 RXFP3Q9NSD7 469 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 BABAM1Q9NWV8 329 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 CA14Q9ULX7 337 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 GNEQ9Y223 722 aaKnown RBP3.84□□□□□ -1.79
VRK3-204ENST00000593912 NR2E1Q9Y466 385 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 MROH7-TTC4A0A0A0MT08 1334 aa3.84□□□□□ -1.79
VRK3-204ENST00000593912 FOCADQ5VW36 1801 aa3.84□□□□□ -1.8
VRK3-204ENST00000593912 ZEB2O60315 1214 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 FLOT1O75955 427 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 SEC24BO95487 1268 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 ITGB1P05556 798 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 SELPP16109 830 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 TECP42680 631 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 RIPK4P57078 832 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 PURAQ00577 322 aaKnown RBP3.83□□□□□ -1.8
VRK3-204ENST00000593912 ZNF252P-AS1Q0IIN9 211 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 SF3A2Q15428 464 aaKnown RBP3.83□□□□□ -1.8
VRK3-204ENST00000593912 LRRFIP1Q32MZ4 808 aaKnown RBP3.83□□□□□ -1.8
VRK3-204ENST00000593912 LLGL2Q6P1M3 1020 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 G2E3Q7L622 706 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 PROSER1Q86XN7 944 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 RIOX2Q8IUF8 465 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 CCDC144CPQ8IYA2 1237 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 FIBCD1Q8N539 461 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 ZBTB44Q8NCP5 570 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 DBF4BQ8NFT6 615 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 SPPL3Q8TCT6 385 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 AFAP1L1Q8TED9 768 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 WNT8BQ93098 351 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 PPP2R3CQ969Q6 453 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms