RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 LGR5O75473 907 aa14.32□□□□□ -0.12
ZNF558-202ENST00000593891 POLR3DP05423 398 aaPredicted RBP14.32□□□□□ -0.12
ZNF558-202ENST00000593891 AOC1P19801 751 aa14.32□□□□□ -0.12
ZNF558-202ENST00000593891 BMPR1AP36894 532 aa14.32□□□□□ -0.12
ZNF558-202ENST00000593891 PLCD1P51178 756 aa14.32□□□□□ -0.12
ZNF558-202ENST00000593891 CHMP4BP1P59074 171 aa14.32□□□□□ -0.12
ZNF558-202ENST00000593891 CNTN2Q02246 1040 aa14.32□□□□□ -0.12
ZNF558-202ENST00000593891 TAPT1Q6NXT6 567 aa14.32□□□□□ -0.12
ZNF558-202ENST00000593891 EEPD1Q7L9B9 569 aa14.32□□□□□ -0.12
ZNF558-202ENST00000593891 SIAH1Q8IUQ4 282 aa14.32□□□□□ -0.12
ZNF558-202ENST00000593891 FIBCD1Q8N539 461 aa14.32□□□□□ -0.12
ZNF558-202ENST00000593891 FAM133AQ8N9E0 248 aa14.32□□□□□ -0.12
ZNF558-202ENST00000593891 SLF1Q9BQI6 1058 aa14.32□□□□□ -0.12
ZNF558-202ENST00000593891 RTP3Q9BQQ7 232 aa14.32□□□□□ -0.12
ZNF558-202ENST00000593891 BARX2Q9UMQ3 279 aaPredicted RBP14.32□□□□□ -0.12
ZNF558-202ENST00000593891 MAST4O15021 2626 aa14.32□□□□□ -0.12
ZNF558-202ENST00000593891 OTOGLQ3ZCN5 2332 aa14.31□□□□□ -0.12
ZNF558-202ENST00000593891 ZBED4O75132 1171 aa14.31□□□□□ -0.12
ZNF558-202ENST00000593891 UPP2O95045 317 aa14.31□□□□□ -0.12
ZNF558-202ENST00000593891 MMP1P03956 469 aa14.31□□□□□ -0.12
ZNF558-202ENST00000593891 CKBP12277 381 aa14.31□□□□□ -0.12
ZNF558-202ENST00000593891 LMNB2Q03252 620 aa14.31□□□□□ -0.12
ZNF558-202ENST00000593891 DUSP28Q4G0W2 176 aa14.31□□□□□ -0.12
ZNF558-202ENST00000593891 FAM83BQ5T0W9 1011 aa14.31□□□□□ -0.12
ZNF558-202ENST00000593891 TMEM63BQ5T3F8 832 aa14.31□□□□□ -0.12
ZNF558-202ENST00000593891 SUSD6Q92537 303 aa14.31□□□□□ -0.12
ZNF558-202ENST00000593891 TOP1MTQ969P6 601 aa14.31□□□□□ -0.12
ZNF558-202ENST00000593891 GOPCQ9HD26 462 aa14.31□□□□□ -0.12
ZNF558-202ENST00000593891 ANGPTL2Q9UKU9 493 aa14.31□□□□□ -0.12
ZNF558-202ENST00000593891 NR2E1Q9Y466 385 aa14.31□□□□□ -0.12
ZNF558-202ENST00000593891 TANC1Q9C0D5 1861 aa14.31□□□□□ -0.12
ZNF558-202ENST00000593891 E9PSI1 815 aa14.3□□□□□ -0.12
ZNF558-202ENST00000593891 IGSF3O75054 1194 aa14.3□□□□□ -0.12
ZNF558-202ENST00000593891 UQCRFS1P1P0C7P4 283 aa14.3□□□□□ -0.12
ZNF558-202ENST00000593891 ARID4AP29374 1257 aaPredicted RBP14.3□□□□□ -0.12
ZNF558-202ENST00000593891 RBL2Q08999 1139 aa14.3□□□□□ -0.12
ZNF558-202ENST00000593891 FBXO16Q8IX29 292 aaPredicted RBP14.3□□□□□ -0.12
ZNF558-202ENST00000593891 USP44Q9H0E7 712 aa14.3□□□□□ -0.12
ZNF558-202ENST00000593891 COG6Q9Y2V7 657 aa14.3□□□□□ -0.12
ZNF558-202ENST00000593891 RAD50Q92878 1312 aa14.3□□□□□ -0.12
ZNF558-202ENST00000593891 PI15O43692 258 aa14.29□□□□□ -0.12
ZNF558-202ENST00000593891 NRIP1P48552 1158 aa14.29□□□□□ -0.12
ZNF558-202ENST00000593891 GABPAQ06546 454 aa14.29□□□□□ -0.12
ZNF558-202ENST00000593891 PPM1JQ5JR12 505 aa14.29□□□□□ -0.12
ZNF558-202ENST00000593891 CWF19L1Q69YN2 538 aaKnown RBP14.29□□□□□ -0.12
ZNF558-202ENST00000593891 CLEC10AQ8IUN9 316 aa14.29□□□□□ -0.12
ZNF558-202ENST00000593891 OR6J1Q8NGC5 347 aa14.29□□□□□ -0.12
ZNF558-202ENST00000593891 IL17RAQ96F46 866 aa14.29□□□□□ -0.12
ZNF558-202ENST00000593891 VTA1Q9NP79 307 aa14.29□□□□□ -0.12
ZNF558-202ENST00000593891 NCDNQ9UBB6 729 aa14.29□□□□□ -0.12
ZNF558-202ENST00000593891 CYP7A1P22680 504 aa14.28□□□□□ -0.12
ZNF558-202ENST00000593891 SP100P23497 879 aaPredicted RBP14.28□□□□□ -0.12
ZNF558-202ENST00000593891 EMSYQ7Z589 1322 aa14.28□□□□□ -0.12
ZNF558-202ENST00000593891 PRPF38AQ8NAV1 312 aaKnown RBP14.28□□□□□ -0.12
ZNF558-202ENST00000593891 DBF4BQ8NFT6 615 aa14.28□□□□□ -0.12
ZNF558-202ENST00000593891 DHX38Q92620 1227 aaKnown RBP14.28□□□□□ -0.12
ZNF558-202ENST00000593891 WDR11Q9BZH6 1224 aa14.28□□□□□ -0.12
ZNF558-202ENST00000593891 RAVER2Q9HCJ3 691 aaKnown RBP14.28□□□□□ -0.12
ZNF558-202ENST00000593891 PA2G4Q9UQ80 394 aaKnown RBP14.28□□□□□ -0.12
ZNF558-202ENST00000593891 CACNA1FO60840 1977 aa14.27□□□□□ -0.12
ZNF558-202ENST00000593891 IL16Q14005 1332 aa14.27□□□□□ -0.12
ZNF558-202ENST00000593891 EXOSC9Q06265 439 aaKnown RBP14.27□□□□□ -0.13
ZNF558-202ENST00000593891 TFCP2Q12800 502 aa14.27□□□□□ -0.13
ZNF558-202ENST00000593891 RBM23Q86U06 439 aaKnown RBP14.27□□□□□ -0.13
ZNF558-202ENST00000593891 IFIH1Q9BYX4 1025 aaKnown RBP14.27□□□□□ -0.13
ZNF558-202ENST00000593891 TSHZ2Q9NRE2 1034 aa14.27□□□□□ -0.13
ZNF558-202ENST00000593891 SNRKQ9NRH2 765 aa14.27□□□□□ -0.13
ZNF558-202ENST00000593891 FANCIQ9NVI1 1328 aa14.26□□□□□ -0.13
ZNF558-202ENST00000593891 GLP2RO95838 553 aa14.26□□□□□ -0.13
ZNF558-202ENST00000593891 VARS2Q5ST30 1063 aaKnown RBP14.26□□□□□ -0.13
ZNF558-202ENST00000593891 GDF6Q6KF10 455 aaPredicted RBP14.26□□□□□ -0.13
ZNF558-202ENST00000593891 ADGRD2Q7Z7M1 963 aa14.26□□□□□ -0.13
ZNF558-202ENST00000593891 MIGA1Q8NAN2 632 aa14.26□□□□□ -0.13
ZNF558-202ENST00000593891 SECISBP2LQ93073 1101 aaKnown RBP14.26□□□□□ -0.13
ZNF558-202ENST00000593891 CTAGE1Q96RT6 745 aa14.26□□□□□ -0.13
ZNF558-202ENST00000593891 PLVAPQ9BX97 442 aa14.26□□□□□ -0.13
ZNF558-202ENST00000593891 COPRSQ9NQ92 184 aa14.26□□□□□ -0.13
ZNF558-202ENST00000593891 HOMER2Q9NSB8 354 aa14.26□□□□□ -0.13
ZNF558-202ENST00000593891 SWAP70Q9UH65 585 aa14.26□□□□□ -0.13
ZNF558-202ENST00000593891 FRYLO94915 3013 aa14.25□□□□□ -0.13
ZNF558-202ENST00000593891 PROS1P07225 676 aa14.25□□□□□ -0.13
ZNF558-202ENST00000593891 EEF2P13639 858 aaKnown RBP14.25□□□□□ -0.13
ZNF558-202ENST00000593891 ZNF200P98182 395 aaPredicted RBP14.25□□□□□ -0.13
ZNF558-202ENST00000593891 CAMK1Q14012 370 aa14.25□□□□□ -0.13
ZNF558-202ENST00000593891 SESTD1Q86VW0 696 aa14.25□□□□□ -0.13
ZNF558-202ENST00000593891 WWC1Q8IX03 1113 aa14.25□□□□□ -0.13
ZNF558-202ENST00000593891 SUMF1Q8NBK3 374 aa14.25□□□□□ -0.13
ZNF558-202ENST00000593891 NEK1Q96PY6 1258 aa14.25□□□□□ -0.13
ZNF558-202ENST00000593891 SMOC2Q9H3U7 446 aa14.25□□□□□ -0.13
ZNF558-202ENST00000593891 ACAD9Q9H845 621 aa14.25□□□□□ -0.13
ZNF558-202ENST00000593891 PLAGL2Q9UPG8 496 aa14.25□□□□□ -0.13
ZNF558-202ENST00000593891 GCN1Q92616 2671 aaKnown RBP14.24□□□□□ -0.13
ZNF558-202ENST00000593891 FSD2A1L4K1 749 aa14.24□□□□□ -0.13
ZNF558-202ENST00000593891 A6NJR5 290 aa14.24□□□□□ -0.13
ZNF558-202ENST00000593891 ZIC2O95409 532 aaPredicted RBP14.24□□□□□ -0.13
ZNF558-202ENST00000593891 AKR1B1P15121 316 aa14.24□□□□□ -0.13
ZNF558-202ENST00000593891 OAZ1P54368 228 aa14.24□□□□□ -0.13
ZNF558-202ENST00000593891 ZNF618Q5T7W0 954 aa14.24□□□□□ -0.13
ZNF558-202ENST00000593891 RIN2Q8WYP3 895 aaPredicted RBP14.24□□□□□ -0.13
ZNF558-202ENST00000593891 TLE6Q9H808 572 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms