RNA–Protein interactions for RNA: ENST00000593742.1

SOD3-202, Transcript of superoxide dismutase 3, humanhuman

TSL 5

Gene SOD3, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3-202ENST00000593742 LRIT3Q3SXY7 679 aa13.93□□□□□ -0.18
SOD3-202ENST00000593742 DUSP28Q4G0W2 176 aa13.93□□□□□ -0.18
SOD3-202ENST00000593742 ARHGEF16Q5VV41 709 aa13.93□□□□□ -0.18
SOD3-202ENST00000593742 CREB3L3Q68CJ9 461 aa13.93□□□□□ -0.18
SOD3-202ENST00000593742 SEPT14Q6ZU15 432 aa13.93□□□□□ -0.18
SOD3-202ENST00000593742 Q7L0L9 218 aa13.93□□□□□ -0.18
SOD3-202ENST00000593742 ANKRD33Q7Z3H0 272 aa13.93□□□□□ -0.18
SOD3-202ENST00000593742 RAB11FIP4Q86YS3 637 aa13.93□□□□□ -0.18
SOD3-202ENST00000593742 COPS5Q92905 334 aa13.93□□□□□ -0.18
SOD3-202ENST00000593742 RMDN3Q96TC7 470 aa13.93□□□□□ -0.18
SOD3-202ENST00000593742 PPP1R12CQ9BZL4 782 aa13.93□□□□□ -0.18
SOD3-202ENST00000593742 PCDHA1Q9Y5I3 950 aa13.93□□□□□ -0.18
SOD3-202ENST00000593742 MROH7Q68CQ1 1323 aa13.92□□□□□ -0.18
SOD3-202ENST00000593742 KIAA0355O15063 1070 aa13.92□□□□□ -0.18
SOD3-202ENST00000593742 TLR3O15455 904 aaKnown RBP13.92□□□□□ -0.18
SOD3-202ENST00000593742 TXNP10599 105 aaKnown RBP13.92□□□□□ -0.18
SOD3-202ENST00000593742 RXRAP19793 462 aa13.92□□□□□ -0.18
SOD3-202ENST00000593742 EDNRBP24530 442 aa13.92□□□□□ -0.18
SOD3-202ENST00000593742 CHMP4BP1P59074 171 aa13.92□□□□□ -0.18
SOD3-202ENST00000593742 ITGA7Q13683 1181 aa13.92□□□□□ -0.18
SOD3-202ENST00000593742 SLC35G1Q2M3R5 365 aa13.92□□□□□ -0.18
SOD3-202ENST00000593742 RGS22Q8NE09 1264 aa13.92□□□□□ -0.18
SOD3-202ENST00000593742 IGDCC4Q8TDY8 1250 aa13.92□□□□□ -0.18
SOD3-202ENST00000593742 NSUN6Q8TEA1 469 aaKnown RBP13.92□□□□□ -0.18
SOD3-202ENST00000593742 SCFD2Q8WU76 684 aa13.92□□□□□ -0.18
SOD3-202ENST00000593742 TOX2Q96NM4 488 aa13.92□□□□□ -0.18
SOD3-202ENST00000593742 LRRC2Q9BYS8 371 aa13.92□□□□□ -0.18
SOD3-202ENST00000593742 LY9Q9HBG7 655 aa13.92□□□□□ -0.18
SOD3-202ENST00000593742 LOC102724159A0A0B4J2E5 919 aa13.91□□□□□ -0.18
SOD3-202ENST00000593742 CCDC69A6NI79 296 aa13.91□□□□□ -0.18
SOD3-202ENST00000593742 C19orf67A6NJJ6 358 aa13.91□□□□□ -0.18
SOD3-202ENST00000593742 CABYRO75952 493 aa13.91□□□□□ -0.18
SOD3-202ENST00000593742 ARIH2O95376 493 aa13.91□□□□□ -0.18
SOD3-202ENST00000593742 HOXA13P31271 388 aaPredicted RBP13.91□□□□□ -0.18
SOD3-202ENST00000593742 MCM5P33992 734 aa13.91□□□□□ -0.18
SOD3-202ENST00000593742 CPT1AP50416 773 aa13.91□□□□□ -0.18
SOD3-202ENST00000593742 FPGSQ05932 587 aa13.91□□□□□ -0.18
SOD3-202ENST00000593742 TROAPQ12815 778 aa13.91□□□□□ -0.18
SOD3-202ENST00000593742 COL9A3Q14050 684 aaPredicted RBP13.91□□□□□ -0.18
SOD3-202ENST00000593742 TTLL4Q14679 1199 aa13.91□□□□□ -0.18
SOD3-202ENST00000593742 PWP2Q15269 919 aaKnown RBP13.91□□□□□ -0.18
SOD3-202ENST00000593742 FAM126BQ8IXS8 530 aa13.91□□□□□ -0.18
SOD3-202ENST00000593742 ZNF654Q8IZM8 581 aa13.91□□□□□ -0.18
SOD3-202ENST00000593742 DEFB123Q8N688 67 aa13.91□□□□□ -0.18
SOD3-202ENST00000593742 CTCFLQ8NI51 663 aaPredicted RBP13.91□□□□□ -0.18
SOD3-202ENST00000593742 PPP1R13LQ8WUF5 828 aa13.91□□□□□ -0.18
SOD3-202ENST00000593742 Q9Y3F1 56 aa13.91□□□□□ -0.18
SOD3-202ENST00000593742 RBM47A0AV96 593 aaKnown RBP13.9□□□□□ -0.18
SOD3-202ENST00000593742 HAX1O00165 279 aa13.9□□□□□ -0.18
SOD3-202ENST00000593742 SH2B2O14492 632 aaPredicted RBP13.9□□□□□ -0.18
SOD3-202ENST00000593742 OPLAHO14841 1288 aa13.9□□□□□ -0.18
SOD3-202ENST00000593742 CYTH3O43739 400 aa13.9□□□□□ -0.18
SOD3-202ENST00000593742 CDC45O75419 566 aa13.9□□□□□ -0.18
SOD3-202ENST00000593742 MYCLP12524 364 aaPredicted RBP13.9□□□□□ -0.18
SOD3-202ENST00000593742 CDK7P50613 346 aa13.9□□□□□ -0.18
SOD3-202ENST00000593742 EPHB4P54760 987 aa13.9□□□□□ -0.18
SOD3-202ENST00000593742 NKX3-2P78367 333 aa13.9□□□□□ -0.18
SOD3-202ENST00000593742 BRDTQ58F21 947 aaPredicted RBP13.9□□□□□ -0.18
SOD3-202ENST00000593742 FAM47CQ5HY64 1035 aa13.9□□□□□ -0.18
SOD3-202ENST00000593742 FCHSD1Q86WN1 690 aa13.9□□□□□ -0.18
SOD3-202ENST00000593742 RNPC3Q96LT9 517 aaKnown RBP13.9□□□□□ -0.18
SOD3-202ENST00000593742 FAM161BQ96MY7 647 aa13.9□□□□□ -0.18
SOD3-202ENST00000593742 TBX21Q9UL17 535 aa13.9□□□□□ -0.18
SOD3-202ENST00000593742 NKRFO15226 690 aaKnown RBP eCLIP13.89□□□□□ -0.19
SOD3-202ENST00000593742 SORBS3O60504 671 aa13.89□□□□□ -0.19
SOD3-202ENST00000593742 DDAH1O94760 285 aa13.89□□□□□ -0.19
SOD3-202ENST00000593742 TIMP1P01033 207 aa13.89□□□□□ -0.19
SOD3-202ENST00000593742 NEFLP07196 543 aa13.89□□□□□ -0.19
SOD3-202ENST00000593742 NECTIN1Q15223 517 aa13.89□□□□□ -0.19
SOD3-202ENST00000593742 STXBP2Q15833 593 aa13.89□□□□□ -0.19
SOD3-202ENST00000593742 LY6KQ17RY6 165 aa13.89□□□□□ -0.19
SOD3-202ENST00000593742 CMTR1Q8N1G2 835 aaKnown RBP13.89□□□□□ -0.19
SOD3-202ENST00000593742 MTMR8Q96EF0 704 aa13.89□□□□□ -0.19
SOD3-202ENST00000593742 ZFP91Q96JP5 570 aaPredicted RBP13.89□□□□□ -0.19
SOD3-202ENST00000593742 TCEANC2Q96MN5 208 aa13.89□□□□□ -0.19
SOD3-202ENST00000593742 TRPV6Q9H1D0 765 aa13.89□□□□□ -0.19
SOD3-202ENST00000593742 RIOX1Q9H6W3 641 aa13.89□□□□□ -0.19
SOD3-202ENST00000593742 PXMP2Q9NR77 195 aa13.89□□□□□ -0.19
SOD3-202ENST00000593742 POLR3EQ9NVU0 708 aa13.89□□□□□ -0.19
SOD3-202ENST00000593742 GRIN2DO15399 1336 aa13.89□□□□□ -0.19
SOD3-202ENST00000593742 LAMA2P24043 3122 aaKnown RBP13.88□□□□□ -0.19
SOD3-202ENST00000593742 PNMA6FA0A0J9YX94 578 aa13.88□□□□□ -0.19
SOD3-202ENST00000593742 GCOM1H8Y6P7 765 aaPredicted RBP13.88□□□□□ -0.19
SOD3-202ENST00000593742 PLEKHA8P1O95397 391 aa13.88□□□□□ -0.19
SOD3-202ENST00000593742 NR3C2P08235 984 aa13.88□□□□□ -0.19
SOD3-202ENST00000593742 POLR2MP0CAP2 368 aa13.88□□□□□ -0.19
SOD3-202ENST00000593742 KIF5BP33176 963 aa13.88□□□□□ -0.19
SOD3-202ENST00000593742 CYP2C18P33260 490 aa13.88□□□□□ -0.19
SOD3-202ENST00000593742 HSD17B4P51659 736 aa13.88□□□□□ -0.19
SOD3-202ENST00000593742 PURAQ00577 322 aaKnown RBP13.88□□□□□ -0.19
SOD3-202ENST00000593742 RNF20Q5VTR2 975 aa13.88□□□□□ -0.19
SOD3-202ENST00000593742 RRP36Q96EU6 259 aaKnown RBP13.88□□□□□ -0.19
SOD3-202ENST00000593742 TMEM87BQ96K49 555 aa13.88□□□□□ -0.19
SOD3-202ENST00000593742 IWS1Q96ST2 819 aa13.88□□□□□ -0.19
SOD3-202ENST00000593742 MTG1Q9BT17 334 aaPredicted RBP13.88□□□□□ -0.19
SOD3-202ENST00000593742 TRMT13Q9NUP7 481 aaKnown RBP13.88□□□□□ -0.19
SOD3-202ENST00000593742 SEC63Q9UGP8 760 aaKnown RBP13.88□□□□□ -0.19
SOD3-202ENST00000593742 SLC12A7Q9Y666 1083 aa13.88□□□□□ -0.19
SOD3-202ENST00000593742 MRVI1Q9Y6F6 885 aa13.88□□□□□ -0.19
SOD3-202ENST00000593742 B4GALT4O60513 344 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms