RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 MFSD5Q6N075 450 aa20.22■□□□□ 0.83
CIRBP-235ENST00000591935 CHST3Q7LGC8 479 aa20.22■□□□□ 0.83
CIRBP-235ENST00000591935 FBXO11Q86XK2 927 aa20.22■□□□□ 0.83
CIRBP-235ENST00000591935 SLC43A3Q8NBI5 491 aa20.22■□□□□ 0.83
CIRBP-235ENST00000591935 MAP4K1Q92918 833 aa20.22■□□□□ 0.83
CIRBP-235ENST00000591935 TAAR1Q96RJ0 339 aa20.22■□□□□ 0.83
CIRBP-235ENST00000591935 MAD2L2Q9UI95 211 aa20.22■□□□□ 0.83
CIRBP-235ENST00000591935 KLRF2D3W0D1 207 aa20.21■□□□□ 0.83
CIRBP-235ENST00000591935 CPT1AP50416 773 aa20.21■□□□□ 0.83
CIRBP-235ENST00000591935 PSMC6P62333 389 aa20.21■□□□□ 0.83
CIRBP-235ENST00000591935 SMAD3P84022 425 aaKnown RBP20.21■□□□□ 0.83
CIRBP-235ENST00000591935 PPIGQ13427 754 aaKnown RBP eCLIP20.21■□□□□ 0.832e-9■■■□□ 15.3
CIRBP-235ENST00000591935 ITGA7Q13683 1181 aa20.21■□□□□ 0.83
CIRBP-235ENST00000591935 SLC35G1Q2M3R5 365 aa20.21■□□□□ 0.83
CIRBP-235ENST00000591935 ZNF697Q5TEC3 545 aa20.21■□□□□ 0.83
CIRBP-235ENST00000591935 SYTL5Q8TDW5 730 aaPredicted RBP20.21■□□□□ 0.83
CIRBP-235ENST00000591935 SCFD2Q8WU76 684 aa20.21■□□□□ 0.83
CIRBP-235ENST00000591935 RNPC3Q96LT9 517 aaKnown RBP20.21■□□□□ 0.83
CIRBP-235ENST00000591935 POLR3EQ9NVU0 708 aa20.21■□□□□ 0.83
CIRBP-235ENST00000591935 MRPL11Q9Y3B7 192 aaKnown RBP20.21■□□□□ 0.83
CIRBP-235ENST00000591935 KIAA1217Q5T5P2 1943 aa20.21■□□□□ 0.83
CIRBP-235ENST00000591935 ERICH2A1L162 156 aa20.2■□□□□ 0.82
CIRBP-235ENST00000591935 PALM3A6NDB9 673 aaPredicted RBP20.2■□□□□ 0.82
CIRBP-235ENST00000591935 IFIT3O14879 490 aaKnown RBP20.2■□□□□ 0.82
CIRBP-235ENST00000591935 PPP1R11O60927 126 aaPredicted RBP20.2■□□□□ 0.82
CIRBP-235ENST00000591935 CD4P01730 458 aa20.2■□□□□ 0.82
CIRBP-235ENST00000591935 NBR1Q14596 966 aa20.2■□□□□ 0.82
CIRBP-235ENST00000591935 TMEM199Q8N511 208 aa20.2■□□□□ 0.82
CIRBP-235ENST00000591935 COPS5Q92905 334 aa20.2■□□□□ 0.82
CIRBP-235ENST00000591935 CIZ1Q9ULV3 898 aaPredicted RBP20.2■□□□□ 0.82
CIRBP-235ENST00000591935 RBM8AQ9Y5S9 174 aaKnown RBP20.2■□□□□ 0.82
CIRBP-235ENST00000591935 ANTXR2P58335 489 aa20.19■□□□□ 0.82
CIRBP-235ENST00000591935 TRAF1Q13077 416 aa20.19■□□□□ 0.82
CIRBP-235ENST00000591935 PPP2R5BQ15173 497 aa20.19■□□□□ 0.82
CIRBP-235ENST00000591935 NFKBIBQ15653 356 aa20.19■□□□□ 0.82
CIRBP-235ENST00000591935 RALYLQ86SE5 291 aaKnown RBP20.19■□□□□ 0.82
CIRBP-235ENST00000591935 NCOA7Q8NI08 942 aa20.19■□□□□ 0.82
CIRBP-235ENST00000591935 MTMR8Q96EF0 704 aa20.19■□□□□ 0.82
CIRBP-235ENST00000591935 PPP1R12CQ9BZL4 782 aa20.19■□□□□ 0.82
CIRBP-235ENST00000591935 GPHNQ9NQX3 736 aaPredicted RBP20.19■□□□□ 0.82
CIRBP-235ENST00000591935 CHMP5Q9NZZ3 219 aa20.19■□□□□ 0.82
CIRBP-235ENST00000591935 K7ELQ4 463 aaPredicted RBP20.18■□□□□ 0.82
CIRBP-235ENST00000591935 OPLAHO14841 1288 aa20.18■□□□□ 0.82
CIRBP-235ENST00000591935 KPNA6O60684 536 aa20.18■□□□□ 0.82
CIRBP-235ENST00000591935 ARIH2O95376 493 aa20.18■□□□□ 0.82
CIRBP-235ENST00000591935 GRM4Q14833 912 aa20.18■□□□□ 0.82
CIRBP-235ENST00000591935 SART3Q15020 963 aaKnown RBP20.18■□□□□ 0.82
CIRBP-235ENST00000591935 C16orf59Q7L2K0 433 aa20.18■□□□□ 0.82
CIRBP-235ENST00000591935 OR6J1Q8NGC5 347 aa20.18■□□□□ 0.82
CIRBP-235ENST00000591935 IGDCC4Q8TDY8 1250 aa20.18■□□□□ 0.82
CIRBP-235ENST00000591935 NSUN6Q8TEA1 469 aaKnown RBP20.18■□□□□ 0.82
CIRBP-235ENST00000591935 IWS1Q96ST2 819 aa20.18■□□□□ 0.82
CIRBP-235ENST00000591935 AMNQ9BXJ7 453 aa20.18■□□□□ 0.82
CIRBP-235ENST00000591935 MYH7BA7E2Y1 1941 aa20.17■□□□□ 0.82
CIRBP-235ENST00000591935 COL9A3Q14050 684 aaPredicted RBP20.17■□□□□ 0.82
CIRBP-235ENST00000591935 TTLL4Q14679 1199 aa20.17■□□□□ 0.82
CIRBP-235ENST00000591935 WTAPQ15007 396 aa20.17■□□□□ 0.82
CIRBP-235ENST00000591935 SLC17A8Q8NDX2 589 aa20.17■□□□□ 0.82
CIRBP-235ENST00000591935 FAM161BQ96MY7 647 aa20.17■□□□□ 0.82
CIRBP-235ENST00000591935 LSG1Q9H089 658 aaKnown RBP20.17■□□□□ 0.82
CIRBP-235ENST00000591935 TRPV6Q9H1D0 765 aa20.17■□□□□ 0.82
CIRBP-235ENST00000591935 CYTH3O43739 400 aa20.16■□□□□ 0.82
CIRBP-235ENST00000591935 ST18O60284 1047 aa20.16■□□□□ 0.82
CIRBP-235ENST00000591935 CFBP00751 764 aa20.16■□□□□ 0.82
CIRBP-235ENST00000591935 MYL3P08590 195 aa20.16■□□□□ 0.82
CIRBP-235ENST00000591935 TXNP10599 105 aaKnown RBP20.16■□□□□ 0.82
CIRBP-235ENST00000591935 CSF2RAP15509 400 aa20.16■□□□□ 0.82
CIRBP-235ENST00000591935 CYP2C18P33260 490 aa20.16■□□□□ 0.82
CIRBP-235ENST00000591935 PURAQ00577 322 aaKnown RBP20.16■□□□□ 0.82
CIRBP-235ENST00000591935 TROAPQ12815 778 aa20.16■□□□□ 0.82
CIRBP-235ENST00000591935 CCDC62Q6P9F0 684 aa20.16■□□□□ 0.82
CIRBP-235ENST00000591935 MB21D2Q8IYB1 491 aaPredicted RBP20.16■□□□□ 0.82
CIRBP-235ENST00000591935 SAMD3Q8N6K7 520 aa20.16■□□□□ 0.82
CIRBP-235ENST00000591935 PPP1R13LQ8WUF5 828 aa20.16■□□□□ 0.82
CIRBP-235ENST00000591935 RMDN3Q96TC7 470 aa20.16■□□□□ 0.82
CIRBP-235ENST00000591935 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.16■□□□□ 0.824e-8■■□□□ 13.3
CIRBP-235ENST00000591935 MAP3K20Q9NYL2 800 aaKnown RBP20.16■□□□□ 0.82
CIRBP-235ENST00000591935 UMODL1Q5DID0 1318 aa20.16■□□□□ 0.82
CIRBP-235ENST00000591935 SCN10AQ9Y5Y9 1956 aa20.15■□□□□ 0.82
CIRBP-235ENST00000591935 TMEM265A0A087WTH1 108 aa20.15■□□□□ 0.82
CIRBP-235ENST00000591935 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.15■□□□□ 0.82
CIRBP-235ENST00000591935 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.15■□□□□ 0.82
CIRBP-235ENST00000591935 ZBTB5O15062 677 aa20.15■□□□□ 0.82
CIRBP-235ENST00000591935 B4GALT4O60513 344 aa20.15■□□□□ 0.82
CIRBP-235ENST00000591935 SUPT20HL2P0C7V6 817 aa20.15■□□□□ 0.82
CIRBP-235ENST00000591935 STXBP2Q15833 593 aa20.15■□□□□ 0.82
CIRBP-235ENST00000591935 TMEM67Q5HYA8 995 aa20.15■□□□□ 0.82
CIRBP-235ENST00000591935 HOMER1Q86YM7 354 aa20.15■□□□□ 0.82
CIRBP-235ENST00000591935 PIGSQ96S52 555 aa20.15■□□□□ 0.82
CIRBP-235ENST00000591935 MTG1Q9BT17 334 aaPredicted RBP20.15■□□□□ 0.82
CIRBP-235ENST00000591935 HIPK3Q9H422 1215 aa20.15■□□□□ 0.82
CIRBP-235ENST00000591935 RIOX1Q9H6W3 641 aa20.15■□□□□ 0.82
CIRBP-235ENST00000591935 ACRP10323 421 aa20.14■□□□□ 0.81
CIRBP-235ENST00000591935 EIF2AK2P19525 551 aaKnown RBP20.14■□□□□ 0.81
CIRBP-235ENST00000591935 DDIT3P35638 169 aa20.14■□□□□ 0.81
CIRBP-235ENST00000591935 MCM2P49736 904 aa20.14■□□□□ 0.81
CIRBP-235ENST00000591935 HSD17B4P51659 736 aa20.14■□□□□ 0.81
CIRBP-235ENST00000591935 ARHGEF16Q5VV41 709 aa20.14■□□□□ 0.81
CIRBP-235ENST00000591935 PSRC1Q6PGN9 363 aaPredicted RBP20.14■□□□□ 0.81
CIRBP-235ENST00000591935 SEPT14Q6ZU15 432 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms