RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 ELP1O95163 1332 aa31.54■■■□□ 2.64
SMAD4-213ENST00000591914 DYNC1LI2O43237 492 aaPredicted RBP31.54■■■□□ 2.64
SMAD4-213ENST00000591914 MAGEA10P43363 369 aaPredicted RBP31.54■■■□□ 2.64
SMAD4-213ENST00000591914 BEX3Q00994 111 aa31.54■■■□□ 2.64
SMAD4-213ENST00000591914 FANCBQ8NB91 859 aa31.54■■■□□ 2.64
SMAD4-213ENST00000591914 RRP36Q96EU6 259 aaKnown RBP31.54■■■□□ 2.64
SMAD4-213ENST00000591914 GLT1D1Q96MS3 346 aa31.54■■■□□ 2.64
SMAD4-213ENST00000591914 BMP8BP34820 402 aa31.53■■■□□ 2.64
SMAD4-213ENST00000591914 FSCN1Q16658 493 aaKnown RBP31.53■■■□□ 2.64
SMAD4-213ENST00000591914 APOA5Q6Q788 366 aa31.53■■■□□ 2.64
SMAD4-213ENST00000591914 SCFD2Q8WU76 684 aa31.53■■■□□ 2.64
SMAD4-213ENST00000591914 PIBF1Q8WXW3 757 aa31.53■■■□□ 2.64
SMAD4-213ENST00000591914 SNX14Q9Y5W7 946 aa31.53■■■□□ 2.64
SMAD4-213ENST00000591914 EPB41L2O43491 1005 aaKnown RBP31.52■■■□□ 2.64
SMAD4-213ENST00000591914 TLE2Q04725 743 aa31.52■■■□□ 2.64
SMAD4-213ENST00000591914 MICU3Q86XE3 530 aa31.52■■■□□ 2.64
SMAD4-213ENST00000591914 RAB11FIP4Q86YS3 637 aa31.52■■■□□ 2.64
SMAD4-213ENST00000591914 PXMP2Q9NR77 195 aa31.52■■■□□ 2.64
SMAD4-213ENST00000591914 PCDH10Q9P2E7 1040 aa31.52■■■□□ 2.64
SMAD4-213ENST00000591914 A0A1W2PPC1 479 aa31.51■■■□□ 2.63
SMAD4-213ENST00000591914 ARHGEF16Q5VV41 709 aa31.51■■■□□ 2.63
SMAD4-213ENST00000591914 SYNE3Q6ZMZ3 975 aa31.51■■■□□ 2.63
SMAD4-213ENST00000591914 PDLIM7Q9NR12 457 aa31.51■■■□□ 2.63
SMAD4-213ENST00000591914 BRPF3Q9ULD4 1205 aa31.51■■■□□ 2.63
SMAD4-213ENST00000591914 EIF2AK2P19525 551 aaKnown RBP31.5■■■□□ 2.63
SMAD4-213ENST00000591914 HOXA13P31271 388 aaPredicted RBP31.5■■■□□ 2.63
SMAD4-213ENST00000591914 PPP2R5BQ15173 497 aa31.5■■■□□ 2.63
SMAD4-213ENST00000591914 STXBP2Q15833 593 aa31.5■■■□□ 2.63
SMAD4-213ENST00000591914 TMTC3Q6ZXV5 915 aa31.5■■■□□ 2.63
SMAD4-213ENST00000591914 ANKRD33Q7Z3H0 272 aa31.5■■■□□ 2.63
SMAD4-213ENST00000591914 CMTR1Q8N1G2 835 aaKnown RBP31.5■■■□□ 2.63
SMAD4-213ENST00000591914 PRKAG2Q9UGJ0 569 aa31.5■■■□□ 2.63
SMAD4-213ENST00000591914 SEC63Q9UGP8 760 aaKnown RBP31.5■■■□□ 2.63
SMAD4-213ENST00000591914 LTBP2Q14767 1821 aa31.49■■■□□ 2.63
SMAD4-213ENST00000591914 GCOM1H8Y6P7 765 aaPredicted RBP31.49■■■□□ 2.63
SMAD4-213ENST00000591914 NKRFO15226 690 aaKnown RBP eCLIP31.49■■■□□ 2.63
SMAD4-213ENST00000591914 POLR2MP0CAP2 368 aa31.49■■■□□ 2.63
SMAD4-213ENST00000591914 JAKMIP1Q96N16 626 aaKnown RBP31.49■■■□□ 2.63
SMAD4-213ENST00000591914 TOX2Q96NM4 488 aa31.49■■■□□ 2.63
SMAD4-213ENST00000591914 ZEB2O60315 1214 aa31.48■■■□□ 2.63
SMAD4-213ENST00000591914 NR3C2P08235 984 aa31.48■■■□□ 2.63
SMAD4-213ENST00000591914 CDK7P50613 346 aa31.48■■■□□ 2.63
SMAD4-213ENST00000591914 CXCL17Q6UXB2 119 aa31.48■■■□□ 2.63
SMAD4-213ENST00000591914 KIAA1217Q5T5P2 1943 aa31.47■■■□□ 2.63
SMAD4-213ENST00000591914 A0A0U1RQG5 324 aaPredicted RBP31.47■■■□□ 2.63
SMAD4-213ENST00000591914 PQBP1O60828 265 aaKnown RBP31.47■■■□□ 2.63
SMAD4-213ENST00000591914 CABYRO75952 493 aa31.47■■■□□ 2.63
SMAD4-213ENST00000591914 TXNP10599 105 aaKnown RBP31.47■■■□□ 2.63
SMAD4-213ENST00000591914 CPA1P15085 419 aa31.47■■■□□ 2.63
SMAD4-213ENST00000591914 FXR1P51114 621 aaKnown RBP eCLIP31.47■■■□□ 2.63
SMAD4-213ENST00000591914 TTLL4Q14679 1199 aa31.47■■■□□ 2.63
SMAD4-213ENST00000591914 CCDC62Q6P9F0 684 aa31.47■■■□□ 2.63
SMAD4-213ENST00000591914 PDCD2LQ9BRP1 358 aa31.47■■■□□ 2.63
SMAD4-213ENST00000591914 PRDM5Q9NQX1 630 aaPredicted RBP31.47■■■□□ 2.63
SMAD4-213ENST00000591914 ZBTB43O43298 467 aa31.46■■■□□ 2.63
SMAD4-213ENST00000591914 EIF3JO75822 258 aaKnown RBP31.46■■■□□ 2.63
SMAD4-213ENST00000591914 ARIH2O95376 493 aa31.46■■■□□ 2.63
SMAD4-213ENST00000591914 CLTBP09497 229 aa31.46■■■□□ 2.63
SMAD4-213ENST00000591914 MDM2Q00987 491 aaPredicted RBP31.46■■■□□ 2.63
SMAD4-213ENST00000591914 BLOC1S2Q6QNY1 142 aa31.46■■■□□ 2.63
SMAD4-213ENST00000591914 SH3RF1Q7Z6J0 888 aa31.46■■■□□ 2.63
SMAD4-213ENST00000591914 OR6J1Q8NGC5 347 aa31.46■■■□□ 2.63
SMAD4-213ENST00000591914 VTI1AQ96AJ9 217 aa31.46■■■□□ 2.63
SMAD4-213ENST00000591914 RBM28Q9NW13 759 aaKnown RBP31.46■■■□□ 2.63
SMAD4-213ENST00000591914 KLF18A0A0U1RQI7 1052 aa31.45■■■□□ 2.63
SMAD4-213ENST00000591914 TRIM43BA6NCK2 446 aa31.45■■■□□ 2.63
SMAD4-213ENST00000591914 ARVCFO00192 962 aa31.45■■■□□ 2.63
SMAD4-213ENST00000591914 CPT1AP50416 773 aa31.45■■■□□ 2.63
SMAD4-213ENST00000591914 RCAN1P53805 252 aa31.45■■■□□ 2.63
SMAD4-213ENST00000591914 TRIM43Q96BQ3 446 aaPredicted RBP31.45■■■□□ 2.63
SMAD4-213ENST00000591914 LBHD1Q9BQE6 289 aaPredicted RBP31.45■■■□□ 2.63
SMAD4-213ENST00000591914 LAMA3Q16787 3333 aa31.45■■■□□ 2.62
SMAD4-213ENST00000591914 MROH7Q68CQ1 1323 aa31.45■■■□□ 2.62
SMAD4-213ENST00000591914 FAAP100Q0VG06 881 aa31.44■■■□□ 2.62
SMAD4-213ENST00000591914 PGM5Q15124 567 aa31.44■■■□□ 2.62
SMAD4-213ENST00000591914 SEPT14Q6ZU15 432 aa31.44■■■□□ 2.62
SMAD4-213ENST00000591914 FBXL16Q8N461 479 aa31.44■■■□□ 2.62
SMAD4-213ENST00000591914 CCDC82Q8N4S0 544 aa31.44■■■□□ 2.62
SMAD4-213ENST00000591914 SLC43A3Q8NBI5 491 aa31.44■■■□□ 2.62
SMAD4-213ENST00000591914 COPS5Q92905 334 aa31.44■■■□□ 2.62
SMAD4-213ENST00000591914 USP26Q9BXU7 913 aa31.44■■■□□ 2.62
SMAD4-213ENST00000591914 UBE2OQ9C0C9 1292 aaKnown RBP31.44■■■□□ 2.62
SMAD4-213ENST00000591914 DCDC2CA8MYV0 355 aa31.43■■■□□ 2.62
SMAD4-213ENST00000591914 RPS6KB1P23443 525 aa31.43■■■□□ 2.62
SMAD4-213ENST00000591914 RTN1Q16799 776 aa31.43■■■□□ 2.62
SMAD4-213ENST00000591914 VSIG10LQ86VR7 867 aa31.43■■■□□ 2.62
SMAD4-213ENST00000591914 FCHSD1Q86WN1 690 aa31.43■■■□□ 2.62
SMAD4-213ENST00000591914 FRMPD4Q14CM0 1322 aa31.43■■■□□ 2.62
SMAD4-213ENST00000591914 A6NJR5 290 aa31.42■■■□□ 2.62
SMAD4-213ENST00000591914 KIAA0355O15063 1070 aa31.42■■■□□ 2.62
SMAD4-213ENST00000591914 PSMA5P28066 241 aa31.42■■■□□ 2.62
SMAD4-213ENST00000591914 FGD1P98174 961 aa31.42■■■□□ 2.62
SMAD4-213ENST00000591914 FUT2Q10981 343 aa31.42■■■□□ 2.62
SMAD4-213ENST00000591914 Q6ZUG5 572 aa31.42■■■□□ 2.62
SMAD4-213ENST00000591914 IL31RAQ8NI17 732 aa31.42■■■□□ 2.62
SMAD4-213ENST00000591914 POLR3EQ9NVU0 708 aa31.42■■■□□ 2.62
SMAD4-213ENST00000591914 CNTNAP5Q8WYK1 1306 aa31.42■■■□□ 2.62
SMAD4-213ENST00000591914 hCG_1642624A0A1W2PR95 340 aa31.41■■■□□ 2.62
SMAD4-213ENST00000591914 PIK3CDO00329 1044 aa31.41■■■□□ 2.62
SMAD4-213ENST00000591914 RGS20O76081 388 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms