RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 NOP9Q86U38 636 aaKnown RBP5.14□□□□□ -1.59
VMP1-212ENST00000591782 NLRP10Q86W26 655 aa5.14□□□□□ -1.59
VMP1-212ENST00000591782 IRF2BP1Q8IU81 584 aa5.14□□□□□ -1.59
VMP1-212ENST00000591782 TEX2Q8IWB9 1127 aa5.14□□□□□ -1.59
VMP1-212ENST00000591782 LZTR1Q8N653 840 aa5.14□□□□□ -1.59
VMP1-212ENST00000591782 PLEKHO2Q8TD55 490 aa5.14□□□□□ -1.59
VMP1-212ENST00000591782 USP33Q8TEY7 942 aa5.14□□□□□ -1.59
VMP1-212ENST00000591782 CHAMP1Q96JM3 812 aa5.14□□□□□ -1.59
VMP1-212ENST00000591782 DIRC2Q96SL1 478 aa5.14□□□□□ -1.59
VMP1-212ENST00000591782 NSUN3Q9H649 340 aaKnown RBP5.14□□□□□ -1.59
VMP1-212ENST00000591782 GPR27Q9NS67 375 aa5.14□□□□□ -1.59
VMP1-212ENST00000591782 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.14□□□□□ -1.59
VMP1-212ENST00000591782 ESYT3A0FGR9 886 aa5.13□□□□□ -1.59
VMP1-212ENST00000591782 OR14I1A6ND48 311 aa5.13□□□□□ -1.59
VMP1-212ENST00000591782 MPOP05164 745 aa5.13□□□□□ -1.59
VMP1-212ENST00000591782 DBHP09172 617 aa5.13□□□□□ -1.59
VMP1-212ENST00000591782 GLI4P10075 376 aa5.13□□□□□ -1.59
VMP1-212ENST00000591782 RAB3GAP1Q15042 981 aa5.13□□□□□ -1.59
VMP1-212ENST00000591782 GIMAP6Q6P9H5 292 aa5.13□□□□□ -1.59
VMP1-212ENST00000591782 RSPO2Q6UXX9 243 aaPredicted RBP5.13□□□□□ -1.59
VMP1-212ENST00000591782 CEP68Q76N32 757 aa5.13□□□□□ -1.59
VMP1-212ENST00000591782 ZNF605Q86T29 641 aa5.13□□□□□ -1.59
VMP1-212ENST00000591782 PTPRN2Q92932 1015 aa5.13□□□□□ -1.59
VMP1-212ENST00000591782 KCNK12Q9HB15 430 aa5.13□□□□□ -1.59
VMP1-212ENST00000591782 TMEM260Q9NX78 707 aa5.13□□□□□ -1.59
VMP1-212ENST00000591782 FAM53CQ9NYF3 392 aa5.13□□□□□ -1.59
VMP1-212ENST00000591782 CCDC163A0A0D9SF12 145 aa5.12□□□□□ -1.59
VMP1-212ENST00000591782 C22orf46C9J442 243 aa5.12□□□□□ -1.59
VMP1-212ENST00000591782 SRGAP3O43295 1099 aa5.12□□□□□ -1.59
VMP1-212ENST00000591782 NTRK1P04629 796 aa5.12□□□□□ -1.59
VMP1-212ENST00000591782 GTF2A2P52657 109 aa5.12□□□□□ -1.59
VMP1-212ENST00000591782 LSAMPQ13449 338 aa5.12□□□□□ -1.59
VMP1-212ENST00000591782 RPTNQ6XPR3 784 aa5.12□□□□□ -1.59
VMP1-212ENST00000591782 LBX2Q6XYB7 198 aa5.12□□□□□ -1.59
VMP1-212ENST00000591782 MAMDC2Q7Z304 686 aaPredicted RBP5.12□□□□□ -1.59
VMP1-212ENST00000591782 CABP7Q86V35 215 aa5.12□□□□□ -1.59
VMP1-212ENST00000591782 IFNL3Q8IZI9 196 aa5.12□□□□□ -1.59
VMP1-212ENST00000591782 Q8N1Y9 231 aa5.12□□□□□ -1.59
VMP1-212ENST00000591782 TMEM169Q96HH4 297 aa5.12□□□□□ -1.59
VMP1-212ENST00000591782 ZFYVE21Q9BQ24 234 aa5.12□□□□□ -1.59
VMP1-212ENST00000591782 EPB41L4BQ9H329 900 aa5.12□□□□□ -1.59
VMP1-212ENST00000591782 ZNF552Q9H707 407 aaPredicted RBP5.12□□□□□ -1.59
VMP1-212ENST00000591782 SLC52A2Q9HAB3 445 aa5.12□□□□□ -1.59
VMP1-212ENST00000591782 RXFP1Q9HBX9 757 aa5.12□□□□□ -1.59
VMP1-212ENST00000591782 DCP1AQ9NPI6 582 aaPredicted RBP5.12□□□□□ -1.59
VMP1-212ENST00000591782 KLHL14Q9P2G3 628 aa5.12□□□□□ -1.59
VMP1-212ENST00000591782 PPARGC1AQ9UBK2 798 aaKnown RBP5.12□□□□□ -1.59
VMP1-212ENST00000591782 TBX22Q9Y458 520 aa5.12□□□□□ -1.59
VMP1-212ENST00000591782 RNF114Q9Y508 228 aa5.12□□□□□ -1.59
VMP1-212ENST00000591782 ZC3H12DA2A288 527 aaKnown RBP5.11□□□□□ -1.59
VMP1-212ENST00000591782 PPP1R12AO14974 1030 aaPredicted RBP5.11□□□□□ -1.59
VMP1-212ENST00000591782 PAX4O43316 350 aa5.11□□□□□ -1.59
VMP1-212ENST00000591782 EIF5BO60841 1220 aaKnown RBP5.11□□□□□ -1.59
VMP1-212ENST00000591782 CYBBP04839 570 aa5.11□□□□□ -1.59
VMP1-212ENST00000591782 GPR85P60893 370 aa5.11□□□□□ -1.59
VMP1-212ENST00000591782 GABREP78334 506 aa5.11□□□□□ -1.59
VMP1-212ENST00000591782 CBX2Q14781 532 aaPredicted RBP5.11□□□□□ -1.59
VMP1-212ENST00000591782 WWC2Q6AWC2 1192 aa5.11□□□□□ -1.59
VMP1-212ENST00000591782 PAQR3Q6TCH7 311 aa5.11□□□□□ -1.59
VMP1-212ENST00000591782 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.11□□□□□ -1.59
VMP1-212ENST00000591782 TRMT2BQ96GJ1 504 aaKnown RBP5.11□□□□□ -1.59
VMP1-212ENST00000591782 CDIP1Q9H305 208 aa5.11□□□□□ -1.59
VMP1-212ENST00000591782 NCOA5Q9HCD5 579 aaKnown RBP5.11□□□□□ -1.59
VMP1-212ENST00000591782 FANCLQ9NW38 375 aa5.11□□□□□ -1.59
VMP1-212ENST00000591782 CLDND1Q9NY35 253 aa5.11□□□□□ -1.59
VMP1-212ENST00000591782 NDOR1Q9UHB4 597 aa5.11□□□□□ -1.59
VMP1-212ENST00000591782 SFMBT1Q9UHJ3 866 aa5.11□□□□□ -1.59
VMP1-212ENST00000591782 HCFC2Q9Y5Z7 792 aa5.11□□□□□ -1.59
VMP1-212ENST00000591782 F8W031 263 aaPredicted RBP5.1□□□□□ -1.59
VMP1-212ENST00000591782 H7BY64 318 aa5.1□□□□□ -1.59
VMP1-212ENST00000591782 AQP7O14520 342 aa5.1□□□□□ -1.59
VMP1-212ENST00000591782 ASMTLO95671 621 aa5.1□□□□□ -1.59
VMP1-212ENST00000591782 YBX1P67809 324 aaKnown RBP5.1□□□□□ -1.59
VMP1-212ENST00000591782 NR1I3Q14994 352 aa5.1□□□□□ -1.59
VMP1-212ENST00000591782 KIZQ2M2Z5 673 aa5.1□□□□□ -1.59
VMP1-212ENST00000591782 PLEKHN1Q494U1 663 aaPredicted RBP5.1□□□□□ -1.59
VMP1-212ENST00000591782 MTDHQ86UE4 582 aaKnown RBP5.1□□□□□ -1.59
VMP1-212ENST00000591782 HOMER1Q86YM7 354 aa5.1□□□□□ -1.59
VMP1-212ENST00000591782 NLGN1Q8N2Q7 840 aa5.1□□□□□ -1.59
VMP1-212ENST00000591782 SLC7A14Q8TBB6 771 aa5.1□□□□□ -1.59
VMP1-212ENST00000591782 MRPL4Q9BYD3 311 aaKnown RBP5.1□□□□□ -1.59
VMP1-212ENST00000591782 MCOLN1Q9GZU1 580 aa5.1□□□□□ -1.59
VMP1-212ENST00000591782 DBR1Q9UK59 544 aaKnown RBP5.1□□□□□ -1.59
VMP1-212ENST00000591782 SIT1Q9Y3P8 196 aa5.1□□□□□ -1.59
VMP1-212ENST00000591782 PCDHA8Q9Y5H6 950 aa5.1□□□□□ -1.59
VMP1-212ENST00000591782 X6R8D5 127 aa5.1□□□□□ -1.59
VMP1-212ENST00000591782 MYOCOSA0A1B0GUC4 107 aa5.09□□□□□ -1.59
VMP1-212ENST00000591782 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.09□□□□□ -1.59
VMP1-212ENST00000591782 TLDC2A0PJX2 215 aa5.09□□□□□ -1.59
VMP1-212ENST00000591782 PLD2O14939 933 aa5.09□□□□□ -1.59
VMP1-212ENST00000591782 RAPGEF3O95398 923 aa5.09□□□□□ -1.59
VMP1-212ENST00000591782 SOD2P04179 222 aa5.09□□□□□ -1.59
VMP1-212ENST00000591782 GRK2P25098 689 aa5.09□□□□□ -1.59
VMP1-212ENST00000591782 VIPR1P32241 457 aa5.09□□□□□ -1.59
VMP1-212ENST00000591782 GRK3P35626 688 aa5.09□□□□□ -1.59
VMP1-212ENST00000591782 MAPKAPK2P49137 400 aa5.09□□□□□ -1.59
VMP1-212ENST00000591782 SRSF3P84103 164 aaKnown RBP5.09□□□□□ -1.59
VMP1-212ENST00000591782 RBM10P98175 930 aaKnown RBP5.09□□□□□ -1.59
VMP1-212ENST00000591782 TRIM61Q5EBN2 209 aa5.09□□□□□ -1.59
VMP1-212ENST00000591782 MROH9Q5TGP6 573 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms