RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 C19orf81C9J6K1 198 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 SH2B2O14492 632 aaPredicted RBP7.47□□□□□ -1.21
VPS4B-205ENST00000591383 EPB41L2O43491 1005 aaKnown RBP7.47□□□□□ -1.21
VPS4B-205ENST00000591383 TRPA1O75762 1119 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 FLOT1O75955 427 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 FAM13AO94988 1023 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 HMGB1P09429 215 aaKnown RBP7.47□□□□□ -1.21
VPS4B-205ENST00000591383 HSPA1AP0DMV8 641 aaKnown RBP7.47□□□□□ -1.21
VPS4B-205ENST00000591383 HSPA1BP0DMV9 641 aaKnown RBP7.47□□□□□ -1.21
VPS4B-205ENST00000591383 CYP2C8P10632 490 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 RPS6KB1P23443 525 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 PSMA5P28066 241 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 SLC1A4P43007 532 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 EPHA4P54764 986 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 MAP2K1Q02750 393 aaPredicted RBP7.47□□□□□ -1.21
VPS4B-205ENST00000591383 TRIM32Q13049 653 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 CRHR2Q13324 411 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 KIAA1755Q5JYT7 1200 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 SLFN13Q68D06 897 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 RCSD1Q6JBY9 416 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 NOL8Q76FK4 1167 aaKnown RBP7.47□□□□□ -1.21
VPS4B-205ENST00000591383 ANKRD23Q86SG2 305 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 MICU3Q86XE3 530 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 DNAJC5GQ8N7S2 189 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 LPAR1Q92633 364 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 C12orf42Q96LP6 360 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 PTPN18Q99952 460 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 TMEM47Q9BQJ4 181 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 PAGR1Q9BTK6 254 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 MYL10Q9BUA6 226 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 C22orf23Q9BZE7 217 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 LY9Q9HBG7 655 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 SENP2Q9HC62 589 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 TMPRSS4Q9NRS4 437 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 ZSWIM5Q9P217 1185 aa7.47□□□□□ -1.21
VPS4B-205ENST00000591383 RLFQ13129 1914 aa7.46□□□□□ -1.21
VPS4B-205ENST00000591383 PLXNB2O15031 1838 aa7.46□□□□□ -1.21
VPS4B-205ENST00000591383 KLF18A0A0U1RQI7 1052 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 F5H6K3 240 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 DHX16O60231 1041 aaKnown RBP7.46□□□□□ -1.22
VPS4B-205ENST00000591383 ALDH1A1P00352 501 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 INHAP05111 366 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 BMP3P12645 472 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 RXRAP19793 462 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 WNT7BP56706 349 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 ANAPC15P60006 121 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 KLRC3Q07444 240 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 SEC23AQ15436 765 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 GPAT2Q6NUI2 795 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 KCTD1Q719H9 257 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 CATIPQ7Z7H3 387 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 SIAH1Q8IUQ4 282 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 CCDC144CPQ8IYA2 1237 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 ZNF654Q8IZM8 581 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 GMCL1P1Q8NEA9 526 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 NUP133Q8WUM0 1156 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 DCAF4Q8WV16 495 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 KIFC2Q96AC6 838 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 TMEM87BQ96K49 555 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 RBCK1Q9BYM8 510 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 ASCC2Q9H1I8 757 aaPredicted RBP7.46□□□□□ -1.22
VPS4B-205ENST00000591383 TSPAN10Q9H1Z9 355 aaPredicted RBP7.46□□□□□ -1.22
VPS4B-205ENST00000591383 CYLDQ9NQC7 956 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 TCP11L1Q9NUJ3 509 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 FBXO28Q9NVF7 368 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 RNF186Q9NXI6 227 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 SERTAD1Q9UHV2 236 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 CTDP1Q9Y5B0 961 aaPredicted RBP7.46□□□□□ -1.22
VPS4B-205ENST00000591383 CYP46A1Q9Y6A2 500 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 MGAMO43451 1857 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 WDR19Q8NEZ3 1342 aa7.46□□□□□ -1.22
VPS4B-205ENST00000591383 GOLGA8AA7E2F4 631 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 TMEM232C9JQI7 657 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 CA12O43570 354 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 DDAH1O94760 285 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 TBC1D8O95759 1140 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 RECKO95980 971 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 PARP1P09874 1014 aaKnown RBP7.45□□□□□ -1.22
VPS4B-205ENST00000591383 GOLGA8HP0CJ92 632 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 PDHBP11177 359 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 MPSTP25325 297 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 TM4SF4P48230 202 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 STAT2P52630 851 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 INHBEP58166 350 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 HERVK_113P62684 666 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 APOBRQ0VD83 1088 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 ASPRV1Q53RT3 343 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 WDR78Q5VTH9 848 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 Q6ZUG5 572 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 DHX32Q7L7V1 743 aaKnown RBP7.45□□□□□ -1.22
VPS4B-205ENST00000591383 TMC7Q7Z402 723 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 DGKHQ86XP1 1220 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 KCNB2Q92953 911 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 BRF1Q92994 677 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 VTI1AQ96AJ9 217 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 ATG4CQ96DT6 458 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 GMCL1Q96IK5 515 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 SLF1Q9BQI6 1058 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 BACH2Q9BYV9 841 aa7.45□□□□□ -1.22
VPS4B-205ENST00000591383 SAP130Q9H0E3 1048 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms