RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 STAM2O75886 525 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 GAP43P17677 238 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 AFMP43652 599 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 SAMD3Q8N6K7 520 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 DHX58Q96C10 678 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 ATP6V0A4Q9HBG4 840 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.62□□□□□ -0.39
SEH1L-208ENST00000590843 VWDEQ8N2E2 1590 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 K7ENM7 598 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 MTMR1Q13613 665 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 RNF139Q8WU17 664 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 DDX50Q9BQ39 737 aaKnown RBP12.62□□□□□ -0.39
SEH1L-208ENST00000590843 CPSF3Q9UKF6 684 aaKnown RBP12.62□□□□□ -0.39
SEH1L-208ENST00000590843 GOLGA6L10A0A0M3HER8 536 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 VWA3AA6NCI4 1184 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 CHMLP26374 656 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 PPFIA1Q13136 1202 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 FAM178BQ8IXR5 827 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 PPM1EQ8WY54 764 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 FAM84BQ96KN1 310 aaPredicted RBP12.62□□□□□ -0.39
SEH1L-208ENST00000590843 TAF1DQ9H5J8 278 aaPredicted RBP12.62□□□□□ -0.39
SEH1L-208ENST00000590843 ZNF302Q9NR11 478 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 SPDYE2BA6NHP3 402 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 FARP2O94887 1054 aaPredicted RBP12.62□□□□□ -0.39
SEH1L-208ENST00000590843 SPDYE6P0CI01 402 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 FERP16591 822 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 RXRAP19793 462 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 HOXA7P31268 230 aaPredicted RBP12.62□□□□□ -0.39
SEH1L-208ENST00000590843 MTERF2Q49AM1 385 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 BTBD8Q5XKL5 378 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 INTS5Q6P9B9 1019 aaKnown RBP12.62□□□□□ -0.39
SEH1L-208ENST00000590843 DIS3L2Q8IYB7 885 aaKnown RBP12.62□□□□□ -0.39
SEH1L-208ENST00000590843 PHKBQ93100 1093 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 VCPKMTQ9H867 229 aa12.62□□□□□ -0.39
SEH1L-208ENST00000590843 BCRP11274 1271 aa12.61□□□□□ -0.39
SEH1L-208ENST00000590843 RPS6KB1P23443 525 aa12.61□□□□□ -0.39
SEH1L-208ENST00000590843 ARHGAP4P98171 946 aa12.61□□□□□ -0.39
SEH1L-208ENST00000590843 CABP7Q86V35 215 aa12.61□□□□□ -0.39
SEH1L-208ENST00000590843 NEK11Q8NG66 645 aa12.61□□□□□ -0.39
SEH1L-208ENST00000590843 MRPS27Q92552 414 aaKnown RBP12.61□□□□□ -0.39
SEH1L-208ENST00000590843 RPF1Q9H9Y2 349 aaKnown RBP12.61□□□□□ -0.39
SEH1L-208ENST00000590843 F5H6K3 240 aa12.61□□□□□ -0.39
SEH1L-208ENST00000590843 KLRC3Q07444 240 aa12.61□□□□□ -0.39
SEH1L-208ENST00000590843 HSP90B2PQ58FF3 399 aa12.61□□□□□ -0.39
SEH1L-208ENST00000590843 DCAF17Q5H9S7 520 aaPredicted RBP12.61□□□□□ -0.39
SEH1L-208ENST00000590843 KMT5AQ9NQR1 393 aa12.61□□□□□ -0.39
SEH1L-208ENST00000590843 DISP2A7MBM2 1401 aa12.61□□□□□ -0.39
SEH1L-208ENST00000590843 ATP2A1O14983 1001 aa12.61□□□□□ -0.39
SEH1L-208ENST00000590843 NYAP2Q9P242 653 aa12.61□□□□□ -0.39
SEH1L-208ENST00000590843 N4BP3O15049 544 aa12.61□□□□□ -0.39
SEH1L-208ENST00000590843 GOLGA8HP0CJ92 632 aa12.61□□□□□ -0.39
SEH1L-208ENST00000590843 ZBTB48P10074 688 aaPredicted RBP12.61□□□□□ -0.39
SEH1L-208ENST00000590843 PRDX5P30044 214 aa12.61□□□□□ -0.39
SEH1L-208ENST00000590843 ATN1P54259 1190 aaPredicted RBP12.61□□□□□ -0.39
SEH1L-208ENST00000590843 PAK2Q13177 524 aa12.61□□□□□ -0.39
SEH1L-208ENST00000590843 ADALQ6DHV7 355 aa12.61□□□□□ -0.39
SEH1L-208ENST00000590843 PPP1R2P3Q6NXS1 205 aa12.61□□□□□ -0.39
SEH1L-208ENST00000590843 BEST2Q8NFU1 509 aa12.61□□□□□ -0.39
SEH1L-208ENST00000590843 IKBKGQ9Y6K9 419 aa12.61□□□□□ -0.39
SEH1L-208ENST00000590843 PHLPP1O60346 1717 aa12.61□□□□□ -0.39
SEH1L-208ENST00000590843 MROH2AA6NES4 1674 aa12.6□□□□□ -0.39
SEH1L-208ENST00000590843 NDC80O14777 642 aa12.6□□□□□ -0.39
SEH1L-208ENST00000590843 ZNF827Q17R98 1081 aa12.6□□□□□ -0.39
SEH1L-208ENST00000590843 GNA14O95837 355 aa12.6□□□□□ -0.39
SEH1L-208ENST00000590843 LEO1Q8WVC0 666 aaPredicted RBP12.6□□□□□ -0.39
SEH1L-208ENST00000590843 CSRNP2Q9H175 543 aa12.6□□□□□ -0.39
SEH1L-208ENST00000590843 NWD1Q149M9 1564 aa12.6□□□□□ -0.39
SEH1L-208ENST00000590843 C17orf102A2RUQ5 167 aa12.6□□□□□ -0.39
SEH1L-208ENST00000590843 HNRNPDLO14979 420 aaKnown RBP12.6□□□□□ -0.39
SEH1L-208ENST00000590843 AKR1B10O60218 316 aa12.6□□□□□ -0.39
SEH1L-208ENST00000590843 LDHAP00338 332 aaKnown RBP12.6□□□□□ -0.39
SEH1L-208ENST00000590843 PAFAH1B1P43034 410 aa12.6□□□□□ -0.39
SEH1L-208ENST00000590843 MYL7Q01449 175 aa12.6□□□□□ -0.39
SEH1L-208ENST00000590843 CES5AQ6NT32 575 aa12.6□□□□□ -0.39
SEH1L-208ENST00000590843 SH3TC2Q8TF17 1288 aa12.6□□□□□ -0.39
SEH1L-208ENST00000590843 COLEC11Q9BWP8 271 aa12.6□□□□□ -0.39
SEH1L-208ENST00000590843 RPS6KA5O75582 802 aa12.6□□□□□ -0.39
SEH1L-208ENST00000590843 OR52Z1P0C646 297 aa12.6□□□□□ -0.39
SEH1L-208ENST00000590843 TTC39CQ8N584 583 aa12.6□□□□□ -0.39
SEH1L-208ENST00000590843 EHBP1Q8NDI1 1231 aa12.6□□□□□ -0.39
SEH1L-208ENST00000590843 TRIM62Q9BVG3 475 aa12.6□□□□□ -0.39
SEH1L-208ENST00000590843 ZSWIM4Q9H7M6 989 aa12.6□□□□□ -0.39
SEH1L-208ENST00000590843 EIF4E1BA6NMX2 242 aaKnown RBP12.59□□□□□ -0.39
SEH1L-208ENST00000590843 TMCO5BA8MYB1 307 aa12.59□□□□□ -0.39
SEH1L-208ENST00000590843 ZBTB5O15062 677 aa12.59□□□□□ -0.39
SEH1L-208ENST00000590843 UPP2O95045 317 aa12.59□□□□□ -0.39
SEH1L-208ENST00000590843 MOCS3O95396 460 aa12.59□□□□□ -0.39
SEH1L-208ENST00000590843 EAF2Q96CJ1 260 aaPredicted RBP12.59□□□□□ -0.39
SEH1L-208ENST00000590843 C1orf112Q9NSG2 853 aa12.59□□□□□ -0.39
SEH1L-208ENST00000590843 ANKFY1Q9P2R3 1169 aa12.59□□□□□ -0.39
SEH1L-208ENST00000590843 SLC27A2O14975 620 aa12.59□□□□□ -0.39
SEH1L-208ENST00000590843 CYBBP04839 570 aa12.59□□□□□ -0.39
SEH1L-208ENST00000590843 MARK3P27448 753 aa12.59□□□□□ -0.39
SEH1L-208ENST00000590843 ALDH7A1P49419 539 aaKnown RBP12.59□□□□□ -0.39
SEH1L-208ENST00000590843 MAPK6Q16659 721 aa12.59□□□□□ -0.39
SEH1L-208ENST00000590843 CDC42EP5Q6NZY7 148 aa12.59□□□□□ -0.39
SEH1L-208ENST00000590843 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.59□□□□□ -0.39
SEH1L-208ENST00000590843 PGBD3Q8N328 593 aa12.59□□□□□ -0.39
SEH1L-208ENST00000590843 ENTPD7Q9NQZ7 604 aa12.59□□□□□ -0.39
SEH1L-208ENST00000590843 STAMBPO95630 424 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms