RNA–Protein interactions for RNA: ENST00000590701.5

ERCC1-211, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-211ENST00000590701 SLC30A10Q6XR72 485 aa17.3■□□□□ 0.36
ERCC1-211ENST00000590701 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.3■□□□□ 0.36
ERCC1-211ENST00000590701 CTAGE1Q96RT6 745 aa17.3■□□□□ 0.36
ERCC1-211ENST00000590701 NAPBQ9H115 298 aa17.3■□□□□ 0.36
ERCC1-211ENST00000590701 RANBP17Q9H2T7 1088 aaKnown RBP17.3■□□□□ 0.36
ERCC1-211ENST00000590701 GPCPD1Q9NPB8 672 aa17.3■□□□□ 0.36
ERCC1-211ENST00000590701 NOD1Q9Y239 953 aa17.3■□□□□ 0.36
ERCC1-211ENST00000590701 TSPY2A6NKD2 308 aa17.29■□□□□ 0.36
ERCC1-211ENST00000590701 BAIAP3O94812 1187 aa17.29■□□□□ 0.36
ERCC1-211ENST00000590701 ZFYP08048 801 aaPredicted RBP17.29■□□□□ 0.36
ERCC1-211ENST00000590701 SLC3A2P08195 630 aaKnown RBP17.29■□□□□ 0.36
ERCC1-211ENST00000590701 MS4A1P11836 297 aa17.29■□□□□ 0.36
ERCC1-211ENST00000590701 FAM117BQ6P1L5 589 aa17.29■□□□□ 0.36
ERCC1-211ENST00000590701 FAM178BQ8IXR5 827 aa17.29■□□□□ 0.36
ERCC1-211ENST00000590701 GJD3Q8N144 294 aa17.29■□□□□ 0.36
ERCC1-211ENST00000590701 CLEC4DQ8WXI8 215 aa17.29■□□□□ 0.36
ERCC1-211ENST00000590701 NACAP1Q9BZK3 213 aa17.29■□□□□ 0.36
ERCC1-211ENST00000590701 UBE2ZQ9H832 354 aaPredicted RBP17.29■□□□□ 0.36
ERCC1-211ENST00000590701 LMCD1Q9NZU5 365 aa17.29■□□□□ 0.36
ERCC1-211ENST00000590701 KPNA6O60684 536 aa17.28■□□□□ 0.36
ERCC1-211ENST00000590701 ARIH2O95376 493 aa17.28■□□□□ 0.36
ERCC1-211ENST00000590701 TXNP10599 105 aaKnown RBP17.28■□□□□ 0.36
ERCC1-211ENST00000590701 IL9P15248 144 aa17.28■□□□□ 0.36
ERCC1-211ENST00000590701 PTPN11Q06124 597 aaPredicted RBP17.28■□□□□ 0.36
ERCC1-211ENST00000590701 PDE4DQ08499 809 aa17.28■□□□□ 0.36
ERCC1-211ENST00000590701 BRDTQ58F21 947 aaPredicted RBP17.28■□□□□ 0.36
ERCC1-211ENST00000590701 GDF6Q6KF10 455 aaPredicted RBP17.28■□□□□ 0.36
ERCC1-211ENST00000590701 UIMC1Q96RL1 719 aa17.28■□□□□ 0.36
ERCC1-211ENST00000590701 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.28■□□□□ 0.36
ERCC1-211ENST00000590701 FRMPD2Q68DX3 1309 aaPredicted RBP17.27■□□□□ 0.36
ERCC1-211ENST00000590701 KCNA5P22460 613 aa17.27■□□□□ 0.36
ERCC1-211ENST00000590701 PPP2R5BQ15173 497 aa17.27■□□□□ 0.36
ERCC1-211ENST00000590701 BTNL9Q6UXG8 535 aa17.27■□□□□ 0.36
ERCC1-211ENST00000590701 RNF207Q6ZRF8 634 aa17.27■□□□□ 0.36
ERCC1-211ENST00000590701 DHX38Q92620 1227 aaKnown RBP17.27■□□□□ 0.36
ERCC1-211ENST00000590701 LINC01553A4QN01 128 aa17.26■□□□□ 0.35
ERCC1-211ENST00000590701 PRR33A8MZF0 331 aa17.26■□□□□ 0.35
ERCC1-211ENST00000590701 NKRFO15226 690 aaKnown RBP eCLIP17.26■□□□□ 0.35
ERCC1-211ENST00000590701 RANBP6O60518 1105 aaKnown RBP17.26■□□□□ 0.35
ERCC1-211ENST00000590701 NBNO60934 754 aa17.26■□□□□ 0.35
ERCC1-211ENST00000590701 SSTR3P32745 418 aaPredicted RBP17.26■□□□□ 0.35
ERCC1-211ENST00000590701 ERVK-21P61565 698 aa17.26■□□□□ 0.35
ERCC1-211ENST00000590701 RPS6P62753 249 aaKnown RBP17.26■□□□□ 0.35
ERCC1-211ENST00000590701 SYDE2Q5VT97 1194 aa17.26■□□□□ 0.35
ERCC1-211ENST00000590701 SCFD2Q8WU76 684 aa17.26■□□□□ 0.35
ERCC1-211ENST00000590701 DCAF4Q8WV16 495 aa17.26■□□□□ 0.35
ERCC1-211ENST00000590701 AFG1LQ8WV93 481 aa17.26■□□□□ 0.35
ERCC1-211ENST00000590701 TGS1Q96RS0 853 aaKnown RBP17.26■□□□□ 0.35
ERCC1-211ENST00000590701 RAD9AQ99638 391 aa17.26■□□□□ 0.35
ERCC1-211ENST00000590701 LOC102724159A0A0B4J2E5 919 aa17.25■□□□□ 0.35
ERCC1-211ENST00000590701 FOXP2O15409 715 aa17.25■□□□□ 0.35
ERCC1-211ENST00000590701 GJB5O95377 273 aa17.25■□□□□ 0.35
ERCC1-211ENST00000590701 SELPP16109 830 aa17.25■□□□□ 0.35
ERCC1-211ENST00000590701 PWP2Q15269 919 aaKnown RBP17.25■□□□□ 0.35
ERCC1-211ENST00000590701 LRRFIP1Q32MZ4 808 aaKnown RBP17.25■□□□□ 0.35
ERCC1-211ENST00000590701 LEXMQ3ZCV2 418 aa17.25■□□□□ 0.35
ERCC1-211ENST00000590701 CNKSR3Q6P9H4 555 aa17.25■□□□□ 0.35
ERCC1-211ENST00000590701 LRRC8DQ7L1W4 858 aa17.25■□□□□ 0.35
ERCC1-211ENST00000590701 AFAP1L1Q8TED9 768 aa17.25■□□□□ 0.35
ERCC1-211ENST00000590701 KAT2BQ92831 832 aa17.25■□□□□ 0.35
ERCC1-211ENST00000590701 MYH7BA7E2Y1 1941 aa17.25■□□□□ 0.35
ERCC1-211ENST00000590701 RAD50Q92878 1312 aa17.24■□□□□ 0.35
ERCC1-211ENST00000590701 SIP14410 1827 aa17.24■□□□□ 0.35
ERCC1-211ENST00000590701 EDNRBP24530 442 aa17.24■□□□□ 0.35
ERCC1-211ENST00000590701 NOVP48745 357 aa17.24■□□□□ 0.35
ERCC1-211ENST00000590701 LY6KQ17RY6 165 aa17.24■□□□□ 0.35
ERCC1-211ENST00000590701 PPP4R3BQ5MIZ7 849 aa17.24■□□□□ 0.35
ERCC1-211ENST00000590701 ZMYM1Q5SVZ6 1142 aa17.24■□□□□ 0.35
ERCC1-211ENST00000590701 PTCRAQ6ISU1 281 aaPredicted RBP17.24■□□□□ 0.35
ERCC1-211ENST00000590701 CHST3Q7LGC8 479 aa17.24■□□□□ 0.35
ERCC1-211ENST00000590701 CAGE1Q8TC20 777 aa17.24■□□□□ 0.35
ERCC1-211ENST00000590701 TBC1D5Q92609 795 aa17.24■□□□□ 0.35
ERCC1-211ENST00000590701 TMEM47Q9BQJ4 181 aa17.24■□□□□ 0.35
ERCC1-211ENST00000590701 C17orf80Q9BSJ5 609 aa17.24■□□□□ 0.35
ERCC1-211ENST00000590701 PIEZO1Q92508 2521 aa17.23■□□□□ 0.35
ERCC1-211ENST00000590701 CXCL10P02778 98 aa17.23■□□□□ 0.35
ERCC1-211ENST00000590701 CKBP12277 381 aa17.23■□□□□ 0.35
ERCC1-211ENST00000590701 MRE11P49959 708 aa17.23■□□□□ 0.35
ERCC1-211ENST00000590701 C20orf194Q5TEA3 1177 aa17.23■□□□□ 0.35
ERCC1-211ENST00000590701 CCDC62Q6P9F0 684 aa17.23■□□□□ 0.35
ERCC1-211ENST00000590701 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.23■□□□□ 0.35
ERCC1-211ENST00000590701 SEPT14Q6ZU15 432 aa17.23■□□□□ 0.35
ERCC1-211ENST00000590701 CCDC155Q8N6L0 562 aa17.23■□□□□ 0.35
ERCC1-211ENST00000590701 GPATCH3Q96I76 525 aa17.23■□□□□ 0.35
ERCC1-211ENST00000590701 HDAC6Q9UBN7 1215 aa17.23■□□□□ 0.35
ERCC1-211ENST00000590701 ABHD14A-ACY1A0A1B0GW23 586 aa17.22■□□□□ 0.35
ERCC1-211ENST00000590701 GRXCR2A6NFK2 248 aa17.22■□□□□ 0.35
ERCC1-211ENST00000590701 H3BQ06 376 aaPredicted RBP17.22■□□□□ 0.35
ERCC1-211ENST00000590701 MMP3P08254 477 aa17.22■□□□□ 0.35
ERCC1-211ENST00000590701 ZNF200P98182 395 aaPredicted RBP17.22■□□□□ 0.35
ERCC1-211ENST00000590701 VPS53Q5VIR6 699 aa17.22■□□□□ 0.35
ERCC1-211ENST00000590701 DNERQ8NFT8 737 aa17.22■□□□□ 0.35
ERCC1-211ENST00000590701 ANKS1AQ92625 1134 aa17.22■□□□□ 0.35
ERCC1-211ENST00000590701 WNT8BQ93098 351 aa17.22■□□□□ 0.35
ERCC1-211ENST00000590701 CRBNQ96SW2 442 aa17.22■□□□□ 0.35
ERCC1-211ENST00000590701 ALG1Q9BT22 464 aa17.22■□□□□ 0.35
ERCC1-211ENST00000590701 FSD1Q9BTV5 496 aa17.22■□□□□ 0.35
ERCC1-211ENST00000590701 DCTPP1Q9H773 170 aa17.22■□□□□ 0.35
ERCC1-211ENST00000590701 ARHGAP1Q07960 439 aa17.21■□□□□ 0.35
ERCC1-211ENST00000590701 IKBKEQ14164 716 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms