RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 ATRNL1Q5VV63 1379 aa6.82□□□□□ -1.32
LINC01539-202ENST00000589293 ZNF521Q96K83 1311 aa6.82□□□□□ -1.32
LINC01539-202ENST00000589293 MYH2Q9UKX2 1941 aa6.82□□□□□ -1.32
LINC01539-202ENST00000589293 C19orf81C9J6K1 198 aa6.82□□□□□ -1.32
LINC01539-202ENST00000589293 WFS1O76024 890 aa6.82□□□□□ -1.32
LINC01539-202ENST00000589293 GNAI2P04899 355 aa6.82□□□□□ -1.32
LINC01539-202ENST00000589293 RGS2P41220 211 aa6.82□□□□□ -1.32
LINC01539-202ENST00000589293 BACE1P56817 501 aa6.82□□□□□ -1.32
LINC01539-202ENST00000589293 DNM1Q05193 864 aaKnown RBP6.82□□□□□ -1.32
LINC01539-202ENST00000589293 LAMC2Q13753 1193 aa6.82□□□□□ -1.32
LINC01539-202ENST00000589293 WDR78Q5VTH9 848 aa6.82□□□□□ -1.32
LINC01539-202ENST00000589293 TREML4Q6UXN2 200 aa6.82□□□□□ -1.32
LINC01539-202ENST00000589293 CERS3Q8IU89 383 aa6.82□□□□□ -1.32
LINC01539-202ENST00000589293 FOXP4Q8IVH2 680 aaPredicted RBP6.82□□□□□ -1.32
LINC01539-202ENST00000589293 GJD3Q8N144 294 aa6.82□□□□□ -1.32
LINC01539-202ENST00000589293 FRAT1Q92837 279 aaPredicted RBP6.82□□□□□ -1.32
LINC01539-202ENST00000589293 NSUN4Q96CB9 384 aaKnown RBP6.82□□□□□ -1.32
LINC01539-202ENST00000589293 MEIS3Q99687 375 aa6.82□□□□□ -1.32
LINC01539-202ENST00000589293 LBHD1Q9BQE6 289 aaPredicted RBP6.82□□□□□ -1.32
LINC01539-202ENST00000589293 PAGR1Q9BTK6 254 aa6.82□□□□□ -1.32
LINC01539-202ENST00000589293 GSX2Q9BZM3 304 aa6.82□□□□□ -1.32
LINC01539-202ENST00000589293 UBE2OQ9C0C9 1292 aaKnown RBP6.82□□□□□ -1.32
LINC01539-202ENST00000589293 GINM1Q9NU53 330 aa6.82□□□□□ -1.32
LINC01539-202ENST00000589293 HMG20BQ9P0W2 317 aa6.82□□□□□ -1.32
LINC01539-202ENST00000589293 KLF15Q9UIH9 416 aa6.82□□□□□ -1.32
LINC01539-202ENST00000589293 MGAMO43451 1857 aa6.81□□□□□ -1.32
LINC01539-202ENST00000589293 HTTP42858 3142 aa6.81□□□□□ -1.32
LINC01539-202ENST00000589293 DOCK1Q14185 1865 aa6.81□□□□□ -1.32
LINC01539-202ENST00000589293 SYN1P17600 705 aa6.81□□□□□ -1.32
LINC01539-202ENST00000589293 MZF1P28698 734 aaPredicted RBP6.81□□□□□ -1.32
LINC01539-202ENST00000589293 BMP8BP34820 402 aa6.81□□□□□ -1.32
LINC01539-202ENST00000589293 USP5P45974 858 aa6.81□□□□□ -1.32
LINC01539-202ENST00000589293 RHBDL3P58872 404 aa6.81□□□□□ -1.32
LINC01539-202ENST00000589293 MFSD14CQ5VZR4 134 aa6.81□□□□□ -1.32
LINC01539-202ENST00000589293 MAPKAPK5Q8IW41 473 aa6.81□□□□□ -1.32
LINC01539-202ENST00000589293 TDHQ8IZJ6 230 aa6.81□□□□□ -1.32
LINC01539-202ENST00000589293 DEFB123Q8N688 67 aa6.81□□□□□ -1.32
LINC01539-202ENST00000589293 TGFBRAP1Q8WUH2 860 aa6.81□□□□□ -1.32
LINC01539-202ENST00000589293 ARHGAP45Q92619 1136 aa6.81□□□□□ -1.32
LINC01539-202ENST00000589293 IRF7Q92985 503 aa6.81□□□□□ -1.32
LINC01539-202ENST00000589293 WDR18Q9BV38 432 aa6.81□□□□□ -1.32
LINC01539-202ENST00000589293 CABP5Q9NP86 173 aa6.81□□□□□ -1.32
LINC01539-202ENST00000589293 AATFQ9NY61 560 aaKnown RBP eCLIP6.81□□□□□ -1.32
LINC01539-202ENST00000589293 MARK1Q9P0L2 795 aa6.81□□□□□ -1.32
LINC01539-202ENST00000589293 ZFATQ9P243 1243 aa6.81□□□□□ -1.32
LINC01539-202ENST00000589293 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.81□□□□□ -1.32
LINC01539-202ENST00000589293 COL2A1P02458 1487 aaPredicted RBP6.8□□□□□ -1.32
LINC01539-202ENST00000589293 IGSF3O75054 1194 aa6.8□□□□□ -1.32
LINC01539-202ENST00000589293 GDF11O95390 407 aa6.8□□□□□ -1.32
LINC01539-202ENST00000589293 XRCC5P13010 732 aaKnown RBP6.8□□□□□ -1.32
LINC01539-202ENST00000589293 CNGA1P29973 690 aa6.8□□□□□ -1.32
LINC01539-202ENST00000589293 HOXA7P31268 230 aaPredicted RBP6.8□□□□□ -1.32
LINC01539-202ENST00000589293 USP14P54578 494 aa6.8□□□□□ -1.32
LINC01539-202ENST00000589293 HERVK_113P62684 666 aa6.8□□□□□ -1.32
LINC01539-202ENST00000589293 SPEM2Q0P670 501 aa6.8□□□□□ -1.32
LINC01539-202ENST00000589293 ALKBH2Q6NS38 261 aa6.8□□□□□ -1.32
LINC01539-202ENST00000589293 DNAJC14Q6Y2X3 702 aaPredicted RBP6.8□□□□□ -1.32
LINC01539-202ENST00000589293 PLEKHH3Q7Z736 793 aa6.8□□□□□ -1.32
LINC01539-202ENST00000589293 CMTR1Q8N1G2 835 aaKnown RBP6.8□□□□□ -1.32
LINC01539-202ENST00000589293 SH3RF3Q8TEJ3 882 aaPredicted RBP6.8□□□□□ -1.32
LINC01539-202ENST00000589293 DIS3LQ8TF46 1054 aaKnown RBP6.8□□□□□ -1.32
LINC01539-202ENST00000589293 CNTNAP3BQ96NU0 1288 aa6.8□□□□□ -1.32
LINC01539-202ENST00000589293 TRERF1Q96PN7 1200 aa6.8□□□□□ -1.32
LINC01539-202ENST00000589293 FAM129BQ96TA1 746 aa6.8□□□□□ -1.32
LINC01539-202ENST00000589293 P2RX7Q99572 595 aaKnown RBP6.8□□□□□ -1.32
LINC01539-202ENST00000589293 CNTNAP3Q9BZ76 1288 aa6.8□□□□□ -1.32
LINC01539-202ENST00000589293 MORF4L1Q9UBU8 362 aa6.8□□□□□ -1.32
LINC01539-202ENST00000589293 OGDHLQ9ULD0 1010 aa6.8□□□□□ -1.32
LINC01539-202ENST00000589293 RFX7Q2KHR2 1363 aa6.8□□□□□ -1.32
LINC01539-202ENST00000589293 CENPFP49454 3210 aa6.8□□□□□ -1.32
LINC01539-202ENST00000589293 GPR182O15218 404 aa6.79□□□□□ -1.32
LINC01539-202ENST00000589293 MSCO60682 206 aa6.79□□□□□ -1.32
LINC01539-202ENST00000589293 IDH1O75874 414 aaKnown RBP6.79□□□□□ -1.32
LINC01539-202ENST00000589293 SLURP2P0DP57 97 aa6.79□□□□□ -1.32
LINC01539-202ENST00000589293 MX2P20592 715 aa6.79□□□□□ -1.32
LINC01539-202ENST00000589293 LORP23490 312 aaPredicted RBP6.79□□□□□ -1.32
LINC01539-202ENST00000589293 MCAMP43121 646 aa6.79□□□□□ -1.32
LINC01539-202ENST00000589293 MAGEA10P43363 369 aaPredicted RBP6.79□□□□□ -1.32
LINC01539-202ENST00000589293 ERVK-24P63145 666 aa6.79□□□□□ -1.32
LINC01539-202ENST00000589293 ATP2B2Q01814 1243 aa6.79□□□□□ -1.32
LINC01539-202ENST00000589293 MTX1Q13505 466 aa6.79□□□□□ -1.32
LINC01539-202ENST00000589293 RAB3GAP1Q15042 981 aa6.79□□□□□ -1.32
LINC01539-202ENST00000589293 ZYXQ15942 572 aaKnown RBP6.79□□□□□ -1.32
LINC01539-202ENST00000589293 PI16Q6UXB8 463 aa6.79□□□□□ -1.32
LINC01539-202ENST00000589293 TTC6Q86TZ1 520 aa6.79□□□□□ -1.32
LINC01539-202ENST00000589293 FTSJ3Q8IY81 847 aaKnown RBP6.79□□□□□ -1.32
LINC01539-202ENST00000589293 TRIB2Q92519 343 aa6.79□□□□□ -1.32
LINC01539-202ENST00000589293 EDC3Q96F86 508 aaKnown RBP6.79□□□□□ -1.32
LINC01539-202ENST00000589293 MDFIQ99750 246 aa6.79□□□□□ -1.32
LINC01539-202ENST00000589293 APBA2Q99767 749 aa6.79□□□□□ -1.32
LINC01539-202ENST00000589293 GDF15Q99988 308 aa6.79□□□□□ -1.32
LINC01539-202ENST00000589293 PRO3102Q9H379 93 aa6.79□□□□□ -1.32
LINC01539-202ENST00000589293 SLC5A4Q9NY91 659 aa6.79□□□□□ -1.32
LINC01539-202ENST00000589293 SAP30BPQ9UHR5 308 aaKnown RBP6.79□□□□□ -1.32
LINC01539-202ENST00000589293 GJD2Q9UKL4 321 aa6.79□□□□□ -1.32
LINC01539-202ENST00000589293 PALD1Q9ULE6 856 aa6.79□□□□□ -1.32
LINC01539-202ENST00000589293 ZBTB21Q9ULJ3 1066 aa6.79□□□□□ -1.32
LINC01539-202ENST00000589293 PHF24Q9UPV7 400 aa6.79□□□□□ -1.32
LINC01539-202ENST00000589293 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.79□□□□□ -1.32
LINC01539-202ENST00000589293 FLT1P17948 1338 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms