RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 RGS22Q8NE09 1264 aa10.26□□□□□ -0.77
SDF2-207ENST00000588472 GLT1D1Q96MS3 346 aa10.26□□□□□ -0.77
SDF2-207ENST00000588472 TSEN34Q9BSV6 310 aaKnown RBP10.26□□□□□ -0.77
SDF2-207ENST00000588472 RIOX1Q9H6W3 641 aa10.26□□□□□ -0.77
SDF2-207ENST00000588472 SLC12A7Q9Y666 1083 aa10.26□□□□□ -0.77
SDF2-207ENST00000588472 LCTP09848 1927 aa10.25□□□□□ -0.77
SDF2-207ENST00000588472 MYH6P13533 1939 aa10.25□□□□□ -0.77
SDF2-207ENST00000588472 PNMA6FA0A0J9YX94 578 aa10.25□□□□□ -0.77
SDF2-207ENST00000588472 MOXD2PA6NHM9 499 aa10.25□□□□□ -0.77
SDF2-207ENST00000588472 DDAH1O94760 285 aa10.25□□□□□ -0.77
SDF2-207ENST00000588472 MYCLP12524 364 aaPredicted RBP10.25□□□□□ -0.77
SDF2-207ENST00000588472 CHMP4BP1P59074 171 aa10.25□□□□□ -0.77
SDF2-207ENST00000588472 CCSAPQ6IQ19 270 aaPredicted RBP10.25□□□□□ -0.77
SDF2-207ENST00000588472 CXCL17Q6UXB2 119 aa10.25□□□□□ -0.77
SDF2-207ENST00000588472 MICU3Q86XE3 530 aa10.25□□□□□ -0.77
SDF2-207ENST00000588472 DNERQ8NFT8 737 aa10.25□□□□□ -0.77
SDF2-207ENST00000588472 OR6J1Q8NGC5 347 aa10.25□□□□□ -0.77
SDF2-207ENST00000588472 MORC4Q8TE76 937 aa10.25□□□□□ -0.77
SDF2-207ENST00000588472 NSUN6Q8TEA1 469 aaKnown RBP10.25□□□□□ -0.77
SDF2-207ENST00000588472 COPS5Q92905 334 aa10.25□□□□□ -0.77
SDF2-207ENST00000588472 MTMR8Q96EF0 704 aa10.25□□□□□ -0.77
SDF2-207ENST00000588472 RRP36Q96EU6 259 aaKnown RBP10.25□□□□□ -0.77
SDF2-207ENST00000588472 ZFP91Q96JP5 570 aaPredicted RBP10.25□□□□□ -0.77
SDF2-207ENST00000588472 UPF3AQ9H1J1 476 aaKnown RBP10.25□□□□□ -0.77
SDF2-207ENST00000588472 RNF216Q9NWF9 866 aaPredicted RBP10.25□□□□□ -0.77
SDF2-207ENST00000588472 GNEQ9Y223 722 aaKnown RBP10.25□□□□□ -0.77
SDF2-207ENST00000588472 BAZ2BQ9UIF8 2168 aaKnown RBP10.24□□□□□ -0.77
SDF2-207ENST00000588472 TRIM43BA6NCK2 446 aa10.24□□□□□ -0.77
SDF2-207ENST00000588472 DCDC2CA8MYV0 355 aa10.24□□□□□ -0.77
SDF2-207ENST00000588472 GCOM1H8Y6P7 765 aaPredicted RBP10.24□□□□□ -0.77
SDF2-207ENST00000588472 OPLAHO14841 1288 aa10.24□□□□□ -0.77
SDF2-207ENST00000588472 CTAGE5O15320 804 aa10.24□□□□□ -0.77
SDF2-207ENST00000588472 ZEB2O60315 1214 aa10.24□□□□□ -0.77
SDF2-207ENST00000588472 SORBS3O60504 671 aa10.24□□□□□ -0.77
SDF2-207ENST00000588472 MYL3P08590 195 aa10.24□□□□□ -0.77
SDF2-207ENST00000588472 POLR2MP0CAP2 368 aa10.24□□□□□ -0.77
SDF2-207ENST00000588472 TXNP10599 105 aaKnown RBP10.24□□□□□ -0.77
SDF2-207ENST00000588472 LIFRP42702 1097 aa10.24□□□□□ -0.77
SDF2-207ENST00000588472 GNAQP50148 359 aa10.24□□□□□ -0.77
SDF2-207ENST00000588472 KRT32Q14532 448 aa10.24□□□□□ -0.77
SDF2-207ENST00000588472 PPP2R5BQ15173 497 aa10.24□□□□□ -0.77
SDF2-207ENST00000588472 DUSP28Q4G0W2 176 aa10.24□□□□□ -0.77
SDF2-207ENST00000588472 FAM109BQ6ICB4 259 aaPredicted RBP10.24□□□□□ -0.77
SDF2-207ENST00000588472 DHX32Q7L7V1 743 aaKnown RBP10.24□□□□□ -0.77
SDF2-207ENST00000588472 SRBD1Q8N5C6 995 aaKnown RBP10.24□□□□□ -0.77
SDF2-207ENST00000588472 FANCBQ8NB91 859 aa10.24□□□□□ -0.77
SDF2-207ENST00000588472 SCFD2Q8WU76 684 aa10.24□□□□□ -0.77
SDF2-207ENST00000588472 PPP1R13LQ8WUF5 828 aa10.24□□□□□ -0.77
SDF2-207ENST00000588472 BADQ92934 168 aa10.24□□□□□ -0.77
SDF2-207ENST00000588472 TRIM43Q96BQ3 446 aaPredicted RBP10.24□□□□□ -0.77
SDF2-207ENST00000588472 JAKMIP1Q96N16 626 aaKnown RBP10.24□□□□□ -0.77
SDF2-207ENST00000588472 PXMP2Q9NR77 195 aa10.24□□□□□ -0.77
SDF2-207ENST00000588472 TMEM39AQ9NV64 488 aa10.24□□□□□ -0.77
SDF2-207ENST00000588472 SEC63Q9UGP8 760 aaKnown RBP10.24□□□□□ -0.77
SDF2-207ENST00000588472 LOC102724159A0A0B4J2E5 919 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 REC8O95072 547 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 NR3C2P08235 984 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 CLTBP09497 229 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 CALM1P0DP23 149 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 CALM2P0DP24 149 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 CALM3P0DP25 149 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 RAG1P15918 1043 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 EDNRBP24530 442 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 CST5P28325 142 aaPredicted RBP10.23□□□□□ -0.77
SDF2-207ENST00000588472 PSMC6P62333 389 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 EXOSC10Q01780 885 aaKnown RBP10.23□□□□□ -0.77
SDF2-207ENST00000588472 TRAF1Q13077 416 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 SNX17Q15036 470 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 PWP2Q15269 919 aaKnown RBP10.23□□□□□ -0.77
SDF2-207ENST00000588472 STXBP2Q15833 593 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 LY6KQ17RY6 165 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 FAM161BQ96MY7 647 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 MAP3K14Q99558 947 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 LZTS2Q9BRK4 669 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 MTA3Q9BTC8 594 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 SPZ1Q9BXG8 430 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 PDLIM7Q9NR12 457 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 BRPF3Q9ULD4 1205 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 SNX14Q9Y5W7 946 aa10.23□□□□□ -0.77
SDF2-207ENST00000588472 LRRC37A2A6NM11 1700 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 A0A0U1RQG5 324 aaPredicted RBP10.22□□□□□ -0.77
SDF2-207ENST00000588472 KLF18A0A0U1RQI7 1052 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 RBM47A0AV96 593 aaKnown RBP10.22□□□□□ -0.77
SDF2-207ENST00000588472 ARVCFO00192 962 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 ZBTB43O43298 467 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 EIF3JO75822 258 aaKnown RBP10.22□□□□□ -0.77
SDF2-207ENST00000588472 ARIH2O95376 493 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 CPT1AP50416 773 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 HSD17B4P51659 736 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 FAAP100Q0VG06 881 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 ITGA7Q13683 1181 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 TTLL4Q14679 1199 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 RTN1Q16799 776 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 TSGA10IPQ3SY00 556 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 ZNF697Q5TEC3 545 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 BLOC1S2Q6QNY1 142 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 POTEHQ6S545 545 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 Q6ZUG5 572 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 HEATR3Q7Z4Q2 680 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 SMARCC2Q8TAQ2 1214 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms