RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 PSMC6P62333 389 aa23.25■■□□□ 1.31
TRAPPC6A-203ENST00000587818 ARHGEF16Q5VV41 709 aa23.25■■□□□ 1.31
TRAPPC6A-203ENST00000587818 SEPT14Q6ZU15 432 aa23.25■■□□□ 1.31
TRAPPC6A-203ENST00000587818 ANKRD33Q7Z3H0 272 aa23.25■■□□□ 1.31
TRAPPC6A-203ENST00000587818 CMTR1Q8N1G2 835 aaKnown RBP23.25■■□□□ 1.31
TRAPPC6A-203ENST00000587818 OR6J1Q8NGC5 347 aa23.25■■□□□ 1.31
TRAPPC6A-203ENST00000587818 TCEANC2Q96MN5 208 aa23.25■■□□□ 1.31
TRAPPC6A-203ENST00000587818 A0A0U1RQG5 324 aaPredicted RBP23.24■■□□□ 1.31
TRAPPC6A-203ENST00000587818 KIAA0355O15063 1070 aa23.24■■□□□ 1.31
TRAPPC6A-203ENST00000587818 ZEB2O60315 1214 aa23.24■■□□□ 1.31
TRAPPC6A-203ENST00000587818 ARIH2O95376 493 aa23.24■■□□□ 1.31
TRAPPC6A-203ENST00000587818 TXNP10599 105 aaKnown RBP23.24■■□□□ 1.31
TRAPPC6A-203ENST00000587818 ADCK5Q3MIX3 580 aa23.24■■□□□ 1.31
TRAPPC6A-203ENST00000587818 RNF20Q5VTR2 975 aa23.24■■□□□ 1.31
TRAPPC6A-203ENST00000587818 CTCFLQ8NI51 663 aaPredicted RBP23.24■■□□□ 1.31
TRAPPC6A-203ENST00000587818 ZFP91Q96JP5 570 aaPredicted RBP23.24■■□□□ 1.31
TRAPPC6A-203ENST00000587818 TOX2Q96NM4 488 aa23.24■■□□□ 1.31
TRAPPC6A-203ENST00000587818 NEK1Q96PY6 1258 aa23.24■■□□□ 1.31
TRAPPC6A-203ENST00000587818 GRIN2DO15399 1336 aa23.24■■□□□ 1.31
TRAPPC6A-203ENST00000587818 DDAH1O94760 285 aa23.23■■□□□ 1.31
TRAPPC6A-203ENST00000587818 PLEKHA8P1O95397 391 aa23.23■■□□□ 1.31
TRAPPC6A-203ENST00000587818 MYL3P08590 195 aa23.23■■□□□ 1.31
TRAPPC6A-203ENST00000587818 RAG1P15918 1043 aa23.23■■□□□ 1.31
TRAPPC6A-203ENST00000587818 HSD17B4P51659 736 aa23.23■■□□□ 1.31
TRAPPC6A-203ENST00000587818 PPP2R5BQ15173 497 aa23.23■■□□□ 1.31
TRAPPC6A-203ENST00000587818 TMTC2Q8N394 836 aa23.23■■□□□ 1.31
TRAPPC6A-203ENST00000587818 SRBD1Q8N5C6 995 aaKnown RBP23.23■■□□□ 1.31
TRAPPC6A-203ENST00000587818 SCFD2Q8WU76 684 aa23.23■■□□□ 1.31
TRAPPC6A-203ENST00000587818 MTA3Q9BTC8 594 aa23.23■■□□□ 1.31
TRAPPC6A-203ENST00000587818 MAF1Q9H063 256 aa23.23■■□□□ 1.31
TRAPPC6A-203ENST00000587818 PXMP2Q9NR77 195 aa23.23■■□□□ 1.31
TRAPPC6A-203ENST00000587818 LTBP2Q14767 1821 aa23.23■■□□□ 1.31
TRAPPC6A-203ENST00000587818 NR3C2P08235 984 aa23.22■■□□□ 1.31
TRAPPC6A-203ENST00000587818 MYCLP12524 364 aaPredicted RBP23.22■■□□□ 1.31
TRAPPC6A-203ENST00000587818 ITGA7Q13683 1181 aa23.22■■□□□ 1.31
TRAPPC6A-203ENST00000587818 SHHQ15465 462 aa23.22■■□□□ 1.31
TRAPPC6A-203ENST00000587818 STXBP2Q15833 593 aa23.22■■□□□ 1.31
TRAPPC6A-203ENST00000587818 C9orf50Q5SZB4 431 aa23.22■■□□□ 1.31
TRAPPC6A-203ENST00000587818 FCHSD1Q86WN1 690 aa23.22■■□□□ 1.31
TRAPPC6A-203ENST00000587818 CCDC82Q8N4S0 544 aa23.22■■□□□ 1.31
TRAPPC6A-203ENST00000587818 PPP1R13LQ8WUF5 828 aa23.22■■□□□ 1.31
TRAPPC6A-203ENST00000587818 IWS1Q96ST2 819 aa23.22■■□□□ 1.31
TRAPPC6A-203ENST00000587818 MAP3K14Q99558 947 aa23.22■■□□□ 1.31
TRAPPC6A-203ENST00000587818 KIF5BP33176 963 aa23.21■■□□□ 1.31
TRAPPC6A-203ENST00000587818 LIFRP42702 1097 aa23.21■■□□□ 1.31
TRAPPC6A-203ENST00000587818 EPHB4P54760 987 aa23.21■■□□□ 1.31
TRAPPC6A-203ENST00000587818 EXOSC10Q01780 885 aaKnown RBP23.21■■□□□ 1.31
TRAPPC6A-203ENST00000587818 LY6KQ17RY6 165 aa23.21■■□□□ 1.31
TRAPPC6A-203ENST00000587818 SLC12A7Q9Y666 1083 aa23.21■■□□□ 1.31
TRAPPC6A-203ENST00000587818 hCG_1642624A0A1W2PR95 340 aa23.2■■□□□ 1.3
TRAPPC6A-203ENST00000587818 CABYRO75952 493 aa23.2■■□□□ 1.3
TRAPPC6A-203ENST00000587818 TTLL4Q14679 1199 aa23.2■■□□□ 1.3
TRAPPC6A-203ENST00000587818 LRIT3Q3SXY7 679 aa23.2■■□□□ 1.3
TRAPPC6A-203ENST00000587818 CCDC62Q6P9F0 684 aa23.2■■□□□ 1.3
TRAPPC6A-203ENST00000587818 FAM126BQ8IXS8 530 aa23.2■■□□□ 1.3
TRAPPC6A-203ENST00000587818 SLC43A3Q8NBI5 491 aa23.2■■□□□ 1.3
TRAPPC6A-203ENST00000587818 RRP36Q96EU6 259 aaKnown RBP23.2■■□□□ 1.3
TRAPPC6A-203ENST00000587818 GCOM1H8Y6P7 765 aaPredicted RBP23.19■■□□□ 1.3
TRAPPC6A-203ENST00000587818 POLR2MP0CAP2 368 aa23.19■■□□□ 1.3
TRAPPC6A-203ENST00000587818 CPA1P15085 419 aa23.19■■□□□ 1.3
TRAPPC6A-203ENST00000587818 GHRHRQ02643 423 aa23.19■■□□□ 1.3
TRAPPC6A-203ENST00000587818 SPZ1Q9BXG8 430 aa23.19■■□□□ 1.3
TRAPPC6A-203ENST00000587818 TRPV6Q9H1D0 765 aa23.19■■□□□ 1.3
TRAPPC6A-203ENST00000587818 TBX21Q9UL17 535 aa23.19■■□□□ 1.3
TRAPPC6A-203ENST00000587818 MROH7Q68CQ1 1323 aa23.18■■□□□ 1.3
TRAPPC6A-203ENST00000587818 NKRFO15226 690 aaKnown RBP eCLIP23.18■■□□□ 1.3
TRAPPC6A-203ENST00000587818 TLR3O15455 904 aaKnown RBP23.18■■□□□ 1.3
TRAPPC6A-203ENST00000587818 EIF3JO75822 258 aaKnown RBP23.18■■□□□ 1.3
TRAPPC6A-203ENST00000587818 TIMP1P01033 207 aa23.18■■□□□ 1.3
TRAPPC6A-203ENST00000587818 CD4P01730 458 aa23.18■■□□□ 1.3
TRAPPC6A-203ENST00000587818 GNAQP50148 359 aa23.18■■□□□ 1.3
TRAPPC6A-203ENST00000587818 CPT1AP50416 773 aa23.18■■□□□ 1.3
TRAPPC6A-203ENST00000587818 PURAQ00577 322 aaKnown RBP23.18■■□□□ 1.3
TRAPPC6A-203ENST00000587818 TRAF1Q13077 416 aa23.18■■□□□ 1.3
TRAPPC6A-203ENST00000587818 TSGA10IPQ3SY00 556 aa23.18■■□□□ 1.3
TRAPPC6A-203ENST00000587818 DHX32Q7L7V1 743 aaKnown RBP23.18■■□□□ 1.3
TRAPPC6A-203ENST00000587818 FANCBQ8NB91 859 aa23.18■■□□□ 1.3
TRAPPC6A-203ENST00000587818 IL31RAQ8NI17 732 aa23.18■■□□□ 1.3
TRAPPC6A-203ENST00000587818 PDCD2LQ9BRP1 358 aa23.18■■□□□ 1.3
TRAPPC6A-203ENST00000587818 PPP1R12CQ9BZL4 782 aa23.18■■□□□ 1.3
TRAPPC6A-203ENST00000587818 POLR3EQ9NVU0 708 aa23.18■■□□□ 1.3
TRAPPC6A-203ENST00000587818 BRPF3Q9ULD4 1205 aa23.18■■□□□ 1.3
TRAPPC6A-203ENST00000587818 KIAA1217Q5T5P2 1943 aa23.18■■□□□ 1.3
TRAPPC6A-203ENST00000587818 SORBS3O60504 671 aa23.17■■□□□ 1.3
TRAPPC6A-203ENST00000587818 CALM1P0DP23 149 aa23.17■■□□□ 1.3
TRAPPC6A-203ENST00000587818 CALM2P0DP24 149 aa23.17■■□□□ 1.3
TRAPPC6A-203ENST00000587818 CALM3P0DP25 149 aa23.17■■□□□ 1.3
TRAPPC6A-203ENST00000587818 SMARCA1P28370 1054 aa23.17■■□□□ 1.3
TRAPPC6A-203ENST00000587818 CHMP4BP1P59074 171 aa23.17■■□□□ 1.3
TRAPPC6A-203ENST00000587818 MICU3Q86XE3 530 aa23.17■■□□□ 1.3
TRAPPC6A-203ENST00000587818 AFG1LQ8WV93 481 aa23.17■■□□□ 1.3
TRAPPC6A-203ENST00000587818 LZTS2Q9BRK4 669 aa23.17■■□□□ 1.3
TRAPPC6A-203ENST00000587818 MAP3K20Q9NYL2 800 aaKnown RBP23.17■■□□□ 1.3
TRAPPC6A-203ENST00000587818 DDX41Q9UJV9 622 aaKnown RBP23.17■■□□□ 1.3
TRAPPC6A-203ENST00000587818 MYH7BA7E2Y1 1941 aa23.16■■□□□ 1.3
TRAPPC6A-203ENST00000587818 A6NJR5 290 aa23.16■■□□□ 1.3
TRAPPC6A-203ENST00000587818 FPGSQ05932 587 aa23.16■■□□□ 1.3
TRAPPC6A-203ENST00000587818 PGM5Q15124 567 aa23.16■■□□□ 1.3
TRAPPC6A-203ENST00000587818 USP17L6PQ6QN14 398 aa23.16■■□□□ 1.3
TRAPPC6A-203ENST00000587818 SYNE3Q6ZMZ3 975 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms