RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 FAM161BQ96MY7 647 aa19.74■□□□□ 0.75
TRIM47-203ENST00000586495 RMDN3Q96TC7 470 aa19.74■□□□□ 0.75
TRIM47-203ENST00000586495 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.74■□□□□ 0.756e-7■□□□□ 9.8
TRIM47-203ENST00000586495 MTG1Q9BT17 334 aaPredicted RBP19.74■□□□□ 0.75
TRIM47-203ENST00000586495 HIPK3Q9H422 1215 aa19.74■□□□□ 0.75
TRIM47-203ENST00000586495 MAP3K20Q9NYL2 800 aaKnown RBP19.74■□□□□ 0.75
TRIM47-203ENST00000586495 CFBP00751 764 aa19.73■□□□□ 0.75
TRIM47-203ENST00000586495 SUPT20HL2P0C7V6 817 aa19.73■□□□□ 0.75
TRIM47-203ENST00000586495 GRM4Q14833 912 aa19.73■□□□□ 0.75
TRIM47-203ENST00000586495 STXBP2Q15833 593 aa19.73■□□□□ 0.75
TRIM47-203ENST00000586495 ARHGEF16Q5VV41 709 aa19.73■□□□□ 0.75
TRIM47-203ENST00000586495 SAMD3Q8N6K7 520 aa19.73■□□□□ 0.75
TRIM47-203ENST00000586495 MTMR8Q96EF0 704 aa19.73■□□□□ 0.75
TRIM47-203ENST00000586495 MYH6P13533 1939 aa19.72■□□□□ 0.75
TRIM47-203ENST00000586495 TMEM265A0A087WTH1 108 aa19.72■□□□□ 0.75
TRIM47-203ENST00000586495 B4GALT4O60513 344 aa19.72■□□□□ 0.75
TRIM47-203ENST00000586495 CYP2C18P33260 490 aa19.72■□□□□ 0.75
TRIM47-203ENST00000586495 TMEM240Q5SV17 173 aa19.72■□□□□ 0.75
TRIM47-203ENST00000586495 PSRC1Q6PGN9 363 aaPredicted RBP19.72■□□□□ 0.75
TRIM47-203ENST00000586495 COPS5Q92905 334 aa19.72■□□□□ 0.75
TRIM47-203ENST00000586495 GUCD1Q96NT3 240 aa19.72■□□□□ 0.75
TRIM47-203ENST00000586495 ALDH8A1Q9H2A2 487 aaPredicted RBP19.72■□□□□ 0.75
TRIM47-203ENST00000586495 SEMA6BQ9H3T3 888 aa19.72■□□□□ 0.75
TRIM47-203ENST00000586495 COL20A1Q9P218 1284 aa19.72■□□□□ 0.75
TRIM47-203ENST00000586495 PCDHA1Q9Y5I3 950 aa19.72■□□□□ 0.75
TRIM47-203ENST00000586495 RBM8AQ9Y5S9 174 aaKnown RBP19.72■□□□□ 0.75
TRIM47-203ENST00000586495 A6NJR5 290 aa19.71■□□□□ 0.75
TRIM47-203ENST00000586495 TMEM67Q5HYA8 995 aa19.71■□□□□ 0.75
TRIM47-203ENST00000586495 SEPT14Q6ZU15 432 aa19.71■□□□□ 0.75
TRIM47-203ENST00000586495 CATIPQ7Z7H3 387 aa19.71■□□□□ 0.75
TRIM47-203ENST00000586495 TRPV6Q9H1D0 765 aa19.71■□□□□ 0.75
TRIM47-203ENST00000586495 RIOX1Q9H6W3 641 aa19.71■□□□□ 0.75
TRIM47-203ENST00000586495 IL23AQ9NPF7 189 aa19.71■□□□□ 0.75
TRIM47-203ENST00000586495 GH1P01241 217 aa19.7■□□□□ 0.74
TRIM47-203ENST00000586495 EIF2AK2P19525 551 aaKnown RBP19.7■□□□□ 0.74
TRIM47-203ENST00000586495 HSD17B4P51659 736 aa19.7■□□□□ 0.74
TRIM47-203ENST00000586495 GHRHRQ02643 423 aa19.7■□□□□ 0.74
TRIM47-203ENST00000586495 CCDC62Q6P9F0 684 aa19.7■□□□□ 0.74
TRIM47-203ENST00000586495 STOX1Q6ZVD7 989 aa19.7■□□□□ 0.74
TRIM47-203ENST00000586495 ZNF365Q70YC5 407 aa19.7■□□□□ 0.74
TRIM47-203ENST00000586495 C16orf59Q7L2K0 433 aa19.7■□□□□ 0.74
TRIM47-203ENST00000586495 CHST3Q7LGC8 479 aa19.7■□□□□ 0.74
TRIM47-203ENST00000586495 HOMER1Q86YM7 354 aa19.7■□□□□ 0.74
TRIM47-203ENST00000586495 NOC4LQ9BVI4 516 aaKnown RBP19.7■□□□□ 0.74
TRIM47-203ENST00000586495 MTIF3Q9H2K0 278 aaKnown RBP19.7■□□□□ 0.74
TRIM47-203ENST00000586495 PXMP2Q9NR77 195 aa19.7■□□□□ 0.74
TRIM47-203ENST00000586495 EIF3JO75822 258 aaKnown RBP19.69■□□□□ 0.74
TRIM47-203ENST00000586495 ARIH2O95376 493 aa19.69■□□□□ 0.74
TRIM47-203ENST00000586495 NR3C2P08235 984 aa19.69■□□□□ 0.74
TRIM47-203ENST00000586495 ACRP10323 421 aa19.69■□□□□ 0.74
TRIM47-203ENST00000586495 TROAPQ12815 778 aa19.69■□□□□ 0.74
TRIM47-203ENST00000586495 CASC1Q6TDU7 716 aa19.69■□□□□ 0.74
TRIM47-203ENST00000586495 MB21D2Q8IYB1 491 aaPredicted RBP19.69■□□□□ 0.74
TRIM47-203ENST00000586495 IGDCC4Q8TDY8 1250 aa19.69■□□□□ 0.74
TRIM47-203ENST00000586495 PIGSQ96S52 555 aa19.69■□□□□ 0.74
TRIM47-203ENST00000586495 MTA3Q9BTC8 594 aa19.69■□□□□ 0.74
TRIM47-203ENST00000586495 TAF6LQ9Y6J9 622 aa19.69■□□□□ 0.74
TRIM47-203ENST00000586495 PNMA6FA0A0J9YX94 578 aa19.68■□□□□ 0.74
TRIM47-203ENST00000586495 OPLAHO14841 1288 aa19.68■□□□□ 0.74
TRIM47-203ENST00000586495 PPP1R11O60927 126 aaPredicted RBP19.68■□□□□ 0.74
TRIM47-203ENST00000586495 FGBP02675 491 aa19.68■□□□□ 0.74
TRIM47-203ENST00000586495 CCL23P55773 120 aa19.68■□□□□ 0.74
TRIM47-203ENST00000586495 PTPN11Q06124 597 aaPredicted RBP19.68■□□□□ 0.74
TRIM47-203ENST00000586495 LY6KQ17RY6 165 aa19.68■□□□□ 0.74
TRIM47-203ENST00000586495 NBPF20Q3BBV1 942 aa19.68■□□□□ 0.74
TRIM47-203ENST00000586495 FAM47CQ5HY64 1035 aa19.68■□□□□ 0.74
TRIM47-203ENST00000586495 NFRKBQ6P4R8 1299 aa19.68■□□□□ 0.74
TRIM47-203ENST00000586495 RPUSD2Q8IZ73 545 aaKnown RBP19.68■□□□□ 0.74
TRIM47-203ENST00000586495 CDX2Q99626 313 aaPredicted RBP19.68■□□□□ 0.74
TRIM47-203ENST00000586495 SENP2Q9HC62 589 aa19.68■□□□□ 0.74
TRIM47-203ENST00000586495 KIF5BP33176 963 aa19.67■□□□□ 0.74
TRIM47-203ENST00000586495 ANTXR2P58335 489 aa19.67■□□□□ 0.74
TRIM47-203ENST00000586495 RASIP1Q5U651 963 aa19.67■□□□□ 0.74
TRIM47-203ENST00000586495 TMTC2Q8N394 836 aa19.67■□□□□ 0.74
TRIM47-203ENST00000586495 CTCFLQ8NI51 663 aaPredicted RBP19.67■□□□□ 0.74
TRIM47-203ENST00000586495 AFG1LQ8WV93 481 aa19.67■□□□□ 0.74
TRIM47-203ENST00000586495 HERVK_113Q902F9 699 aa19.67■□□□□ 0.74
TRIM47-203ENST00000586495 MAP3K14Q99558 947 aa19.67■□□□□ 0.74
TRIM47-203ENST00000586495 ESYT1Q9BSJ8 1104 aa19.67■□□□□ 0.74
TRIM47-203ENST00000586495 TTYH1Q9H313 450 aaPredicted RBP19.67■□□□□ 0.74
TRIM47-203ENST00000586495 TRMT13Q9NUP7 481 aaKnown RBP19.67■□□□□ 0.74
TRIM47-203ENST00000586495 MRVI1Q9Y6F6 885 aa19.67■□□□□ 0.74
TRIM47-203ENST00000586495 UMODL1Q5DID0 1318 aa19.67■□□□□ 0.74
TRIM47-203ENST00000586495 GCOM1H8Y6P7 765 aaPredicted RBP19.66■□□□□ 0.74
TRIM47-203ENST00000586495 CYTH3O43739 400 aa19.66■□□□□ 0.74
TRIM47-203ENST00000586495 MMP3P08254 477 aa19.66■□□□□ 0.74
TRIM47-203ENST00000586495 POLR2MP0CAP2 368 aa19.66■□□□□ 0.74
TRIM47-203ENST00000586495 CASTP20810 708 aaKnown RBP19.66■□□□□ 0.74
TRIM47-203ENST00000586495 DNAJB2P25686 324 aa19.66■□□□□ 0.74
TRIM47-203ENST00000586495 MCM5P33992 734 aa19.66■□□□□ 0.74
TRIM47-203ENST00000586495 KCNV1Q6PIU1 500 aa19.66■□□□□ 0.74
TRIM47-203ENST00000586495 CENPQQ7L2Z9 268 aaPredicted RBP19.66■□□□□ 0.74
TRIM47-203ENST00000586495 PDCD2LQ9BRP1 358 aa19.66■□□□□ 0.74
TRIM47-203ENST00000586495 LSG1Q9H089 658 aaKnown RBP19.66■□□□□ 0.74
TRIM47-203ENST00000586495 DDX41Q9UJV9 622 aaKnown RBP19.66■□□□□ 0.74
TRIM47-203ENST00000586495 SCN10AQ9Y5Y9 1956 aa19.66■□□□□ 0.74
TRIM47-203ENST00000586495 PRC1O43663 620 aa19.65■□□□□ 0.74
TRIM47-203ENST00000586495 DDAH1O94760 285 aa19.65■□□□□ 0.74
TRIM47-203ENST00000586495 CYP2C9P11712 490 aa19.65■□□□□ 0.74
TRIM47-203ENST00000586495 MYCLP12524 364 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms