RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 CBX8Q9HC52 389 aa23.17■■□□□ 1.3
ATG4D-204ENST00000586417 SERTAD1Q9UHV2 236 aa23.17■■□□□ 1.3
ATG4D-204ENST00000586417 TUBE1Q9UJT0 475 aa23.17■■□□□ 1.3
ATG4D-204ENST00000586417 SPDYE16A6NNV3 312 aaPredicted RBP23.17■■□□□ 1.3
ATG4D-204ENST00000586417 PEX10O60683 326 aa23.17■■□□□ 1.3
ATG4D-204ENST00000586417 LONP1P36776 959 aaKnown RBP23.17■■□□□ 1.3
ATG4D-204ENST00000586417 CCDC174Q6PII3 467 aa23.17■■□□□ 1.3
ATG4D-204ENST00000586417 C11orf57Q6ZUT1 292 aaPredicted RBP23.17■■□□□ 1.3
ATG4D-204ENST00000586417 RANBP17Q9H2T7 1088 aaKnown RBP23.17■■□□□ 1.3
ATG4D-204ENST00000586417 TESPA1A2RU30 521 aaPredicted RBP23.16■■□□□ 1.3
ATG4D-204ENST00000586417 PDHXO00330 501 aa23.16■■□□□ 1.3
ATG4D-204ENST00000586417 VWA5AO00534 786 aa23.16■■□□□ 1.3
ATG4D-204ENST00000586417 CAVIN2O95810 425 aa23.16■■□□□ 1.3
ATG4D-204ENST00000586417 CCDC173Q0VFZ6 552 aa23.16■■□□□ 1.3
ATG4D-204ENST00000586417 PDILTQ8N807 584 aa23.16■■□□□ 1.3
ATG4D-204ENST00000586417 ANO10Q9NW15 660 aa23.16■■□□□ 1.3
ATG4D-204ENST00000586417 ADAMTS5Q9UNA0 930 aa23.16■■□□□ 1.3
ATG4D-204ENST00000586417 MEIS2O14770 477 aa23.15■■□□□ 1.3
ATG4D-204ENST00000586417 FOXN1O15353 648 aa23.15■■□□□ 1.3
ATG4D-204ENST00000586417 NEMFO60524 1076 aa23.15■■□□□ 1.3
ATG4D-204ENST00000586417 CYP2C8P10632 490 aa23.15■■□□□ 1.3
ATG4D-204ENST00000586417 IRX3P78415 501 aaPredicted RBP23.15■■□□□ 1.3
ATG4D-204ENST00000586417 PNOCQ13519 176 aa23.15■■□□□ 1.3
ATG4D-204ENST00000586417 USH1GQ495M9 461 aa23.15■■□□□ 1.3
ATG4D-204ENST00000586417 USP17L6PQ6QN14 398 aa23.15■■□□□ 1.3
ATG4D-204ENST00000586417 DTHD1Q6ZMT9 781 aa23.15■■□□□ 1.3
ATG4D-204ENST00000586417 ANP32BQ92688 251 aaKnown RBP23.15■■□□□ 1.3
ATG4D-204ENST00000586417 PDLIM2Q96JY6 352 aa23.15■■□□□ 1.3
ATG4D-204ENST00000586417 SLC38A10Q9HBR0 1119 aa23.15■■□□□ 1.3
ATG4D-204ENST00000586417 CEP350Q5VT06 3117 aa23.15■■□□□ 1.3
ATG4D-204ENST00000586417 MANSC4A6NHS7 340 aaPredicted RBP23.14■■□□□ 1.3
ATG4D-204ENST00000586417 IGF2BP3O00425 579 aaKnown RBP eCLIP23.14■■□□□ 1.3
ATG4D-204ENST00000586417 OPLAHO14841 1288 aa23.14■■□□□ 1.3
ATG4D-204ENST00000586417 AOC2O75106 756 aa23.14■■□□□ 1.3
ATG4D-204ENST00000586417 OR52Z1P0C646 297 aa23.14■■□□□ 1.3
ATG4D-204ENST00000586417 ZNF165P49910 485 aa23.14■■□□□ 1.3
ATG4D-204ENST00000586417 ANKRD23Q86SG2 305 aa23.14■■□□□ 1.3
ATG4D-204ENST00000586417 CAPNS2Q96L46 248 aa23.14■■□□□ 1.3
ATG4D-204ENST00000586417 HOXC10Q9NYD6 342 aa23.14■■□□□ 1.3
ATG4D-204ENST00000586417 ZNF536O15090 1300 aa23.14■■□□□ 1.3
ATG4D-204ENST00000586417 MYH7BA7E2Y1 1941 aa23.14■■□□□ 1.3
ATG4D-204ENST00000586417 LUZP1Q86V48 1076 aa23.14■■□□□ 1.29
ATG4D-204ENST00000586417 TDP2O95551 362 aa23.13■■□□□ 1.29
ATG4D-204ENST00000586417 HERVK_113P62684 666 aa23.13■■□□□ 1.29
ATG4D-204ENST00000586417 POTEDQ86YR6 584 aa23.13■■□□□ 1.29
ATG4D-204ENST00000586417 CPXCR1Q8N123 301 aa23.13■■□□□ 1.29
ATG4D-204ENST00000586417 REPS2Q8NFH8 660 aa23.13■■□□□ 1.29
ATG4D-204ENST00000586417 DHX58Q96C10 678 aa23.13■■□□□ 1.29
ATG4D-204ENST00000586417 AGBL1Q96MI9 1066 aa23.13■■□□□ 1.29
ATG4D-204ENST00000586417 PABPC4Q13310 644 aaKnown RBP eCLIP23.12■■□□□ 1.293e-36■■■□□ 18.1
ATG4D-204ENST00000586417 E2F4Q16254 413 aa23.12■■□□□ 1.29
ATG4D-204ENST00000586417 PPP4R3AQ6IN85 833 aa23.12■■□□□ 1.29
ATG4D-204ENST00000586417 MTMR9Q96QG7 549 aa23.12■■□□□ 1.29
ATG4D-204ENST00000586417 RAVER2Q9HCJ3 691 aaKnown RBP23.12■■□□□ 1.29
ATG4D-204ENST00000586417 MYPNQ86TC9 1320 aa23.12■■□□□ 1.29
ATG4D-204ENST00000586417 A0A0G2JMZ2 1700 aa23.12■■□□□ 1.29
ATG4D-204ENST00000586417 SLC37A4O43826 429 aa23.12■■□□□ 1.29
ATG4D-204ENST00000586417 SLFN14P0C7P3 912 aa23.12■■□□□ 1.29
ATG4D-204ENST00000586417 PRR29P0C7W0 189 aa23.12■■□□□ 1.29
ATG4D-204ENST00000586417 OSBPP22059 807 aa23.12■■□□□ 1.29
ATG4D-204ENST00000586417 NLRP12P59046 1061 aa23.12■■□□□ 1.29
ATG4D-204ENST00000586417 AP3B2Q13367 1082 aa23.12■■□□□ 1.29
ATG4D-204ENST00000586417 TMEM132BQ14DG7 1078 aa23.12■■□□□ 1.29
ATG4D-204ENST00000586417 IQCB1Q15051 598 aa23.12■■□□□ 1.29
ATG4D-204ENST00000586417 POSTNQ15063 836 aa23.12■■□□□ 1.29
ATG4D-204ENST00000586417 DPCR1Q3MIW9 517 aa23.12■■□□□ 1.29
ATG4D-204ENST00000586417 KANK3Q6NY19 840 aa23.12■■□□□ 1.29
ATG4D-204ENST00000586417 SH3RF1Q7Z6J0 888 aa23.12■■□□□ 1.29
ATG4D-204ENST00000586417 ANO3Q9BYT9 981 aa23.12■■□□□ 1.29
ATG4D-204ENST00000586417 BIN1O00499 593 aa23.11■■□□□ 1.29
ATG4D-204ENST00000586417 ZBED4O75132 1171 aa23.11■■□□□ 1.29
ATG4D-204ENST00000586417 BTBD7Q9P203 1132 aa23.11■■□□□ 1.29
ATG4D-204ENST00000586417 USP25Q9UHP3 1055 aa23.11■■□□□ 1.29
ATG4D-204ENST00000586417 HOOK1Q9UJC3 728 aaKnown RBP23.11■■□□□ 1.29
ATG4D-204ENST00000586417 ZNF214Q9UL59 606 aaPredicted RBP23.11■■□□□ 1.29
ATG4D-204ENST00000586417 SLC45A1Q9Y2W3 748 aa23.11■■□□□ 1.29
ATG4D-204ENST00000586417 PCDHA5Q9Y5H7 936 aa23.11■■□□□ 1.29
ATG4D-204ENST00000586417 CDC25AP30304 524 aa23.1■■□□□ 1.29
ATG4D-204ENST00000586417 TRAF1Q13077 416 aa23.1■■□□□ 1.29
ATG4D-204ENST00000586417 LBX2Q6XYB7 198 aa23.1■■□□□ 1.29
ATG4D-204ENST00000586417 IFNL1Q8IU54 200 aa23.1■■□□□ 1.29
ATG4D-204ENST00000586417 GRAMD1CQ8IYS0 662 aa23.1■■□□□ 1.29
ATG4D-204ENST00000586417 CRYGNQ8WXF5 182 aa23.1■■□□□ 1.29
ATG4D-204ENST00000586417 PP2D1A8MPX8 630 aa23.09■■□□□ 1.29
ATG4D-204ENST00000586417 ICAM1P05362 532 aa23.09■■□□□ 1.29
ATG4D-204ENST00000586417 NOGQ13253 232 aa23.09■■□□□ 1.29
ATG4D-204ENST00000586417 NT5DC1Q5TFE4 455 aa23.09■■□□□ 1.29
ATG4D-204ENST00000586417 MCTP2Q6DN12 878 aa23.09■■□□□ 1.29
ATG4D-204ENST00000586417 CEP57L1Q8IYX8 460 aa23.09■■□□□ 1.29
ATG4D-204ENST00000586417 TXNRD2Q9NNW7 524 aa23.09■■□□□ 1.29
ATG4D-204ENST00000586417 RBPJLQ9UBG7 517 aa23.09■■□□□ 1.29
ATG4D-204ENST00000586417 RIPK3Q9Y572 518 aa23.09■■□□□ 1.29
ATG4D-204ENST00000586417 PIK3CDO00329 1044 aa23.09■■□□□ 1.29
ATG4D-204ENST00000586417 AP5Z1O43299 807 aa23.09■■□□□ 1.29
ATG4D-204ENST00000586417 SARSP49591 514 aaKnown RBP23.09■■□□□ 1.29
ATG4D-204ENST00000586417 VEGFBP49765 207 aa23.09■■□□□ 1.29
ATG4D-204ENST00000586417 INHBEP58166 350 aa23.09■■□□□ 1.29
ATG4D-204ENST00000586417 PDXDC2PQ6P474 469 aa23.09■■□□□ 1.29
ATG4D-204ENST00000586417 SPATA20Q8TB22 786 aa23.09■■□□□ 1.29
ATG4D-204ENST00000586417 PAGE5Q96GU1 130 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms