RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 RTP1P59025 263 aa9.99□□□□□ -0.81
ATG4D-202ENST00000585437 PDE4DQ08499 809 aa9.99□□□□□ -0.81
ATG4D-202ENST00000585437 FUT2Q10981 343 aa9.99□□□□□ -0.81
ATG4D-202ENST00000585437 DUSP28Q4G0W2 176 aa9.99□□□□□ -0.81
ATG4D-202ENST00000585437 NFXL1Q6ZNB6 911 aa9.99□□□□□ -0.81
ATG4D-202ENST00000585437 EEPD1Q7L9B9 569 aa9.99□□□□□ -0.81
ATG4D-202ENST00000585437 NSUN6Q8TEA1 469 aaKnown RBP9.99□□□□□ -0.81
ATG4D-202ENST00000585437 JAKMIP1Q96N16 626 aaKnown RBP9.99□□□□□ -0.81
ATG4D-202ENST00000585437 IWS1Q96ST2 819 aa9.99□□□□□ -0.81
ATG4D-202ENST00000585437 RMDN3Q96TC7 470 aa9.99□□□□□ -0.81
ATG4D-202ENST00000585437 MPHOSPH6Q99547 160 aaKnown RBP9.99□□□□□ -0.81
ATG4D-202ENST00000585437 USP26Q9BXU7 913 aa9.99□□□□□ -0.81
ATG4D-202ENST00000585437 PXMP2Q9NR77 195 aa9.99□□□□□ -0.81
ATG4D-202ENST00000585437 B4DLN1 442 aa9.98□□□□□ -0.81
ATG4D-202ENST00000585437 PIK3CDO00329 1044 aa9.98□□□□□ -0.81
ATG4D-202ENST00000585437 ZBTB43O43298 467 aa9.98□□□□□ -0.81
ATG4D-202ENST00000585437 CFBP00751 764 aa9.98□□□□□ -0.81
ATG4D-202ENST00000585437 ASGR1P07306 291 aa9.98□□□□□ -0.81
ATG4D-202ENST00000585437 C6orf222P0C671 652 aaPredicted RBP9.98□□□□□ -0.81
ATG4D-202ENST00000585437 CPA1P15085 419 aa9.98□□□□□ -0.81
ATG4D-202ENST00000585437 RPS6KB1P23443 525 aa9.98□□□□□ -0.81
ATG4D-202ENST00000585437 MRPL12P52815 198 aaKnown RBP9.98□□□□□ -0.81
ATG4D-202ENST00000585437 ATN1P54259 1190 aaPredicted RBP9.98□□□□□ -0.81
ATG4D-202ENST00000585437 EVCP57679 992 aa9.98□□□□□ -0.81
ATG4D-202ENST00000585437 KCNA10Q16322 511 aa9.98□□□□□ -0.81
ATG4D-202ENST00000585437 TRIM60Q495X7 471 aa9.98□□□□□ -0.81
ATG4D-202ENST00000585437 CCDC62Q6P9F0 684 aa9.98□□□□□ -0.81
ATG4D-202ENST00000585437 BLOC1S2Q6QNY1 142 aa9.98□□□□□ -0.81
ATG4D-202ENST00000585437 PCSK9Q8NBP7 692 aaKnown RBP9.98□□□□□ -0.81
ATG4D-202ENST00000585437 SCFD2Q8WU76 684 aa9.98□□□□□ -0.81
ATG4D-202ENST00000585437 RRP36Q96EU6 259 aaKnown RBP9.98□□□□□ -0.81
ATG4D-202ENST00000585437 IL17RAQ96F46 866 aa9.98□□□□□ -0.81
ATG4D-202ENST00000585437 GDF15Q99988 308 aa9.98□□□□□ -0.81
ATG4D-202ENST00000585437 PDCD2LQ9BRP1 358 aa9.98□□□□□ -0.81
ATG4D-202ENST00000585437 FAM217BQ9NTX9 383 aaPredicted RBP9.98□□□□□ -0.81
ATG4D-202ENST00000585437 RBM28Q9NW13 759 aaKnown RBP9.98□□□□□ -0.81
ATG4D-202ENST00000585437 COLQQ9Y215 455 aaPredicted RBP9.98□□□□□ -0.81
ATG4D-202ENST00000585437 TRIOBPQ9H2D6 2365 aa9.98□□□□□ -0.81
ATG4D-202ENST00000585437 ELP1O95163 1332 aa9.98□□□□□ -0.81
ATG4D-202ENST00000585437 LAMA2P24043 3122 aaKnown RBP9.98□□□□□ -0.81
ATG4D-202ENST00000585437 KLF18A0A0U1RQI7 1052 aa9.97□□□□□ -0.81
ATG4D-202ENST00000585437 A0A1W2PPC1 479 aa9.97□□□□□ -0.81
ATG4D-202ENST00000585437 NKRFO15226 690 aaKnown RBP eCLIP9.97□□□□□ -0.81
ATG4D-202ENST00000585437 ARIH2O95376 493 aa9.97□□□□□ -0.81
ATG4D-202ENST00000585437 HOXA13P31271 388 aaPredicted RBP9.97□□□□□ -0.81
ATG4D-202ENST00000585437 BMP8BP34820 402 aa9.97□□□□□ -0.81
ATG4D-202ENST00000585437 PGM5Q15124 567 aa9.97□□□□□ -0.81
ATG4D-202ENST00000585437 PPP2R5BQ15173 497 aa9.97□□□□□ -0.81
ATG4D-202ENST00000585437 FSCN1Q16658 493 aaKnown RBP9.97□□□□□ -0.81
ATG4D-202ENST00000585437 RTN1Q16799 776 aa9.97□□□□□ -0.81
ATG4D-202ENST00000585437 HABP4Q5JVS0 413 aaKnown RBP9.97□□□□□ -0.81
ATG4D-202ENST00000585437 CHRDL2Q6WN34 429 aa9.97□□□□□ -0.81
ATG4D-202ENST00000585437 ANKRD33Q7Z3H0 272 aa9.97□□□□□ -0.81
ATG4D-202ENST00000585437 RAB11FIP4Q86YS3 637 aa9.97□□□□□ -0.81
ATG4D-202ENST00000585437 CMTR1Q8N1G2 835 aaKnown RBP9.97□□□□□ -0.81
ATG4D-202ENST00000585437 IL31RAQ8NI17 732 aa9.97□□□□□ -0.81
ATG4D-202ENST00000585437 FERMT2Q96AC1 680 aa9.97□□□□□ -0.81
ATG4D-202ENST00000585437 WDR11Q9BZH6 1224 aa9.97□□□□□ -0.81
ATG4D-202ENST00000585437 TM6SF1Q9BZW5 370 aa9.97□□□□□ -0.81
ATG4D-202ENST00000585437 SPC25Q9HBM1 224 aa9.97□□□□□ -0.81
ATG4D-202ENST00000585437 ZSWIM6Q9HCJ5 1215 aa9.97□□□□□ -0.81
ATG4D-202ENST00000585437 PDLIM7Q9NR12 457 aa9.97□□□□□ -0.81
ATG4D-202ENST00000585437 SEC63Q9UGP8 760 aaKnown RBP9.97□□□□□ -0.81
ATG4D-202ENST00000585437 GBF1Q92538 1859 aa9.96□□□□□ -0.81
ATG4D-202ENST00000585437 A6NJR5 290 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 GOLGA8AA7E2F4 631 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 GOLGA8BA8MQT2 603 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 GCOM1H8Y6P7 765 aaPredicted RBP9.96□□□□□ -0.82
ATG4D-202ENST00000585437 hCG_1984214I3L0E3 225 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 MEIS2O14770 477 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 RGS20O76081 388 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 MYCNP04198 464 aaPredicted RBP9.96□□□□□ -0.82
ATG4D-202ENST00000585437 NR3C2P08235 984 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 POLR2MP0CAP2 368 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 SYN1P17600 705 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 EIF2AK2P19525 551 aaKnown RBP9.96□□□□□ -0.82
ATG4D-202ENST00000585437 CASTP20810 708 aaKnown RBP9.96□□□□□ -0.82
ATG4D-202ENST00000585437 PSMA5P28066 241 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 CDC27P30260 824 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 CDK7P50613 346 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 BEX3Q00994 111 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 TOB2Q14106 344 aaPredicted RBP9.96□□□□□ -0.82
ATG4D-202ENST00000585437 STXBP2Q15833 593 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 GNASQ5JWF2 1037 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 SYNE3Q6ZMZ3 975 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 Q6ZUG5 572 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 RUFY3Q7L099 469 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 TEX2Q8IWB9 1127 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 ZNF713Q8N859 430 aaPredicted RBP9.96□□□□□ -0.82
ATG4D-202ENST00000585437 SLC43A3Q8NBI5 491 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 BRF1Q92994 677 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 GLT1D1Q96MS3 346 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 TOX2Q96NM4 488 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 C22orf23Q9BZE7 217 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 STARD7Q9NQZ5 370 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 RBM27Q9P2N5 1060 aaKnown RBP9.96□□□□□ -0.82
ATG4D-202ENST00000585437 ZMYND8Q9ULU4 1186 aaPredicted RBP9.96□□□□□ -0.82
ATG4D-202ENST00000585437 ATP11BQ9Y2G3 1177 aa9.96□□□□□ -0.82
ATG4D-202ENST00000585437 SCN5AQ14524 2016 aa9.95□□□□□ -0.82
ATG4D-202ENST00000585437 A0A0U1RQG5 324 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms